RNA–Protein interactions for RNA: ENST00000611390.1

CDK13-206, Transcript of cyclin dependent kinase 13, humanhuman

TSL 5 BASIC

Gene CDK13, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-206ENST00000611390 NISCHQ9Y2I1 1504 aa26.12■■□□□ 1.77
CDK13-206ENST00000611390 CCDC180Q9P1Z9 1646 aa22.54■■□□□ 1.2
CDK13-206ENST00000611390 ZCCHC6Q5VYS8 1495 aaKnown RBP22.04■■□□□ 1.12
CDK13-206ENST00000611390 SHROOM4Q9ULL8 1493 aa21.63■■□□□ 1.05
CDK13-206ENST00000611390 DCAF1Q9Y4B6 1507 aa21.59■■□□□ 1.05
CDK13-206ENST00000611390 DCAF8L2P0C7V8 631 aa21.42■■□□□ 1.02
CDK13-206ENST00000611390 MYO15BQ96JP2 1530 aa21.17■□□□□ 0.98
CDK13-206ENST00000611390 SUPT5HO00267 1087 aaKnown RBP21.01■□□□□ 0.95
CDK13-206ENST00000611390 ABCC9O60706 1549 aa20.97■□□□□ 0.95
CDK13-206ENST00000611390 NACADO15069 1562 aa20.9■□□□□ 0.94
CDK13-206ENST00000611390 SCRIBQ14160 1630 aa20.82■□□□□ 0.92
CDK13-206ENST00000611390 RB1CC1Q8TDY2 1594 aa20.62■□□□□ 0.89
CDK13-206ENST00000611390 RSF1Q96T23 1441 aaPredicted RBP20.44■□□□□ 0.86
CDK13-206ENST00000611390 CHIC1Q5VXU3 224 aa20.35■□□□□ 0.85
CDK13-206ENST00000611390 CECR2Q9BXF3 1484 aa20.28■□□□□ 0.84
CDK13-206ENST00000611390 MROH2BQ7Z745 1585 aa20.21■□□□□ 0.83
CDK13-206ENST00000611390 UNC13AQ9UPW8 1703 aa20.2■□□□□ 0.82
CDK13-206ENST00000611390 BAZ1AQ9NRL2 1556 aaPredicted RBP20.13■□□□□ 0.81
CDK13-206ENST00000611390 WIZO95785 1651 aa20.04■□□□□ 0.8
CDK13-206ENST00000611390 BICRAQ9NZM4 1560 aa20.01■□□□□ 0.79
CDK13-206ENST00000611390 SMARCA4P51532 1647 aa19.98■□□□□ 0.79
CDK13-206ENST00000611390 PABPN1Q86U42 306 aaKnown RBP eCLIP19.86■□□□□ 0.77
CDK13-206ENST00000611390 TOP2AP11388 1531 aaKnown RBP19.86■□□□□ 0.77
CDK13-206ENST00000611390 EIF4G1Q04637 1599 aaKnown RBP19.72■□□□□ 0.75
CDK13-206ENST00000611390 PEG3Q9GZU2 1588 aa19.72■□□□□ 0.75
CDK13-206ENST00000611390 TRIM41Q8WV44 630 aa19.71■□□□□ 0.75
CDK13-206ENST00000611390 SMARCA2P51531 1590 aa19.69■□□□□ 0.74
CDK13-206ENST00000611390 CCDC88BA6NC98 1476 aa19.66■□□□□ 0.74
CDK13-206ENST00000611390 LOC105371045A0A1W2PR82 267 aa19.58■□□□□ 0.73
CDK13-206ENST00000611390 ATAD2BQ9ULI0 1458 aa19.56■□□□□ 0.72
CDK13-206ENST00000611390 BAZ1BQ9UIG0 1483 aaKnown RBP19.47■□□□□ 0.71
CDK13-206ENST00000611390 ABCC8Q09428 1581 aa19.4■□□□□ 0.7
CDK13-206ENST00000611390 FAM9AQ8IZU1 332 aaPredicted RBP19.37■□□□□ 0.69
CDK13-206ENST00000611390 HMGXB3Q12766 1538 aa19.32■□□□□ 0.68
CDK13-206ENST00000611390 NCAPD3P42695 1498 aa19.31■□□□□ 0.68
CDK13-206ENST00000611390 WRNQ14191 1432 aaPredicted RBP eCLIP19.22■□□□□ 0.67
CDK13-206ENST00000611390 EEA1Q15075 1411 aa19.18■□□□□ 0.66
CDK13-206ENST00000611390 PCGF6Q9BYE7 350 aa19.14■□□□□ 0.65
CDK13-206ENST00000611390 SOGA1O94964 1423 aa19.13■□□□□ 0.65
CDK13-206ENST00000611390 SYNJ1O43426 1573 aa19.12■□□□□ 0.65
CDK13-206ENST00000611390 EHMT2Q96KQ7 1210 aa19.09■□□□□ 0.65
CDK13-206ENST00000611390 TRIM26Q12899 539 aaPredicted RBP19.03■□□□□ 0.64
CDK13-206ENST00000611390 RUSC2Q8N2Y8 1516 aa19.03■□□□□ 0.64
CDK13-206ENST00000611390 CSRNP3Q8WYN3 585 aa19.02■□□□□ 0.64
CDK13-206ENST00000611390 CFTRP13569 1480 aa19.01■□□□□ 0.63
CDK13-206ENST00000611390 TOP2BQ02880 1626 aa19■□□□□ 0.63
CDK13-206ENST00000611390 CC2D2AQ9P2K1 1620 aa18.97■□□□□ 0.63
CDK13-206ENST00000611390 BIVM-ERCC5R4GMW8 1640 aa18.97■□□□□ 0.63
CDK13-206ENST00000611390 TNIKQ9UKE5 1360 aa18.96■□□□□ 0.63
CDK13-206ENST00000611390 HRCP23327 699 aa18.96■□□□□ 0.63
CDK13-206ENST00000611390 GOLGA3Q08378 1498 aa18.93■□□□□ 0.62
CDK13-206ENST00000611390 KIF21BO75037 1637 aa18.89■□□□□ 0.61
CDK13-206ENST00000611390 CEP162Q5TB80 1403 aa18.89■□□□□ 0.61
CDK13-206ENST00000611390 CEP164Q9UPV0 1460 aa18.89■□□□□ 0.61
CDK13-206ENST00000611390 PRDM2Q13029 1718 aa18.88■□□□□ 0.61
CDK13-206ENST00000611390 CUX1P39880 1505 aa18.86■□□□□ 0.61
CDK13-206ENST00000611390 CADPSQ9ULU8 1353 aa18.85■□□□□ 0.61
CDK13-206ENST00000611390 UBTFP17480 764 aaKnown RBP18.81■□□□□ 0.6
CDK13-206ENST00000611390 RAPGEF2Q9Y4G8 1499 aa18.72■□□□□ 0.59
CDK13-206ENST00000611390 ERICH3Q5RHP9 1530 aa18.69■□□□□ 0.58
CDK13-206ENST00000611390 PRXQ9BXM0 1461 aa18.69■□□□□ 0.58
CDK13-206ENST00000611390 KIF27Q86VH2 1401 aa18.69■□□□□ 0.58
CDK13-206ENST00000611390 FANCD2Q9BXW9 1451 aa18.64■□□□□ 0.58
CDK13-206ENST00000611390 CLIP1P30622 1438 aa18.64■□□□□ 0.57
CDK13-206ENST00000611390 PPARGC1BQ86YN6 1023 aaKnown RBP18.62■□□□□ 0.57
CDK13-206ENST00000611390 FGD5Q6ZNL6 1462 aa18.58■□□□□ 0.57
CDK13-206ENST00000611390 LAMC3Q9Y6N6 1575 aa18.57■□□□□ 0.56
CDK13-206ENST00000611390 DNMBPQ6XZF7 1577 aa18.55■□□□□ 0.56
CDK13-206ENST00000611390 CUX2O14529 1486 aa18.55■□□□□ 0.56
CDK13-206ENST00000611390 NESP48681 1621 aa18.55■□□□□ 0.56
CDK13-206ENST00000611390 VPS8Q8N3P4 1428 aa18.54■□□□□ 0.56
CDK13-206ENST00000611390 TOPBP1Q92547 1522 aa18.49■□□□□ 0.55
CDK13-206ENST00000611390 ZEB1P37275 1124 aaPredicted RBP18.49■□□□□ 0.55
CDK13-206ENST00000611390 IGF1RP08069 1367 aa18.49■□□□□ 0.55
CDK13-206ENST00000611390 POLA1P09884 1462 aaPredicted RBP18.44■□□□□ 0.54
CDK13-206ENST00000611390 ABCA10Q8WWZ4 1543 aa18.44■□□□□ 0.54
CDK13-206ENST00000611390 PDS5BQ9NTI5 1447 aa18.42■□□□□ 0.54
CDK13-206ENST00000611390 ARAP1Q96P48 1450 aa18.42■□□□□ 0.54
CDK13-206ENST00000611390 CARMIL1Q5VZK9 1371 aa18.4■□□□□ 0.54
CDK13-206ENST00000611390 TTBK1Q5TCY1 1321 aaPredicted RBP18.4■□□□□ 0.54
CDK13-206ENST00000611390 URB2Q14146 1524 aaKnown RBP18.39■□□□□ 0.53
CDK13-206ENST00000611390 DNAJC5BQ9UF47 199 aa18.39■□□□□ 0.53
CDK13-206ENST00000611390 RAD54L2Q9Y4B4 1467 aa18.38■□□□□ 0.53
CDK13-206ENST00000611390 RANGAP1P46060 587 aaPredicted RBP18.37■□□□□ 0.53
CDK13-206ENST00000611390 APLP2Q06481 763 aa18.34■□□□□ 0.53
CDK13-206ENST00000611390 ARHGAP35Q9NRY4 1499 aa18.33■□□□□ 0.52
CDK13-206ENST00000611390 WDR97A6NE52 1622 aa18.32■□□□□ 0.52
CDK13-206ENST00000611390 KIF21AQ7Z4S6 1674 aa18.29■□□□□ 0.52
CDK13-206ENST00000611390 CUL7Q14999 1698 aa18.29■□□□□ 0.52
CDK13-206ENST00000611390 ABCA5Q8WWZ7 1642 aa18.24■□□□□ 0.51
CDK13-206ENST00000611390 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.22■□□□□ 0.51
CDK13-206ENST00000611390 AEBP2Q6ZN18 517 aaPredicted RBP18.22■□□□□ 0.51
CDK13-206ENST00000611390 CCER1Q8TC90 406 aaPredicted RBP18.2■□□□□ 0.5
CDK13-206ENST00000611390 GAPVD1Q14C86 1478 aa18.18■□□□□ 0.5
CDK13-206ENST00000611390 TARBP1Q13395 1621 aaKnown RBP18.17■□□□□ 0.5
CDK13-206ENST00000611390 MRC2Q9UBG0 1479 aa18.16■□□□□ 0.5
CDK13-206ENST00000611390 TDRD9Q8NDG6 1382 aaKnown RBP18.16■□□□□ 0.5
CDK13-206ENST00000611390 MAP3K1Q13233 1512 aa18.14■□□□□ 0.49
CDK13-206ENST00000611390 EFCAB5A4FU69 1503 aa18.13■□□□□ 0.49
CDK13-206ENST00000611390 KANK4Q5T7N3 995 aaPredicted RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms