RNA–Protein interactions for RNA: ENST00000611331.1

LINC01949-202, Transcript of long intergenic non-protein coding RNA 1949, humanhuman

TSL 2

Gene LINC01949, Length 1,618 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01949-202ENST00000611331 AEBP2Q6ZN18 517 aaPredicted RBP21.23■□□□□ 0.99
LINC01949-202ENST00000611331 CHIC1Q5VXU3 224 aa20.73■□□□□ 0.91
LINC01949-202ENST00000611331 NISCHQ9Y2I1 1504 aa19.25■□□□□ 0.67
LINC01949-202ENST00000611331 ABCC9O60706 1549 aa18.37■□□□□ 0.53
LINC01949-202ENST00000611331 PHF23Q9BUL5 403 aaPredicted RBP18.16■□□□□ 0.5
LINC01949-202ENST00000611331 SENP3Q9H4L4 574 aaPredicted RBP18.14■□□□□ 0.49
LINC01949-202ENST00000611331 DNAJC5BQ9UF47 199 aa17.86■□□□□ 0.45
LINC01949-202ENST00000611331 CCDC180Q9P1Z9 1646 aa17.62■□□□□ 0.41
LINC01949-202ENST00000611331 RB1CC1Q8TDY2 1594 aa17.15■□□□□ 0.34
LINC01949-202ENST00000611331 PABPN1Q86U42 306 aaKnown RBP eCLIP16.97■□□□□ 0.31
LINC01949-202ENST00000611331 DNAJC5Q9H3Z4 198 aa16.97■□□□□ 0.31
LINC01949-202ENST00000611331 POTEDQ86YR6 584 aa16.88■□□□□ 0.29
LINC01949-202ENST00000611331 NACADO15069 1562 aa16.83■□□□□ 0.29
LINC01949-202ENST00000611331 PLPPR3Q6T4P5 718 aa16.83■□□□□ 0.28
LINC01949-202ENST00000611331 FOXD1Q16676 465 aa16.78■□□□□ 0.28
LINC01949-202ENST00000611331 UNC13AQ9UPW8 1703 aa16.74■□□□□ 0.27
LINC01949-202ENST00000611331 BICRAQ9NZM4 1560 aa16.65■□□□□ 0.26
LINC01949-202ENST00000611331 CECR2Q9BXF3 1484 aa16.62■□□□□ 0.25
LINC01949-202ENST00000611331 DCAF8L2P0C7V8 631 aa16.61■□□□□ 0.25
LINC01949-202ENST00000611331 CC2D2AQ9P2K1 1620 aa16.55■□□□□ 0.24
LINC01949-202ENST00000611331 SHROOM4Q9ULL8 1493 aa16.37■□□□□ 0.21
LINC01949-202ENST00000611331 MYO15BQ96JP2 1530 aa16.33■□□□□ 0.2
LINC01949-202ENST00000611331 EIF4G1Q04637 1599 aaKnown RBP16.32■□□□□ 0.2
LINC01949-202ENST00000611331 CUX2O14529 1486 aa16.14■□□□□ 0.17
LINC01949-202ENST00000611331 PPP6R1Q9UPN7 881 aa16.04■□□□□ 0.16
LINC01949-202ENST00000611331 ADRA2BP18089 450 aa16.03■□□□□ 0.16
LINC01949-202ENST00000611331 SCRIBQ14160 1630 aa16.02■□□□□ 0.15
LINC01949-202ENST00000611331 TRIM41Q8WV44 630 aa15.95■□□□□ 0.14
LINC01949-202ENST00000611331 ERCC6Q03468 1493 aa15.93■□□□□ 0.14
LINC01949-202ENST00000611331 DCAF1Q9Y4B6 1507 aa15.85■□□□□ 0.13
LINC01949-202ENST00000611331 PIAS4Q8N2W9 510 aaPredicted RBP15.81■□□□□ 0.12
LINC01949-202ENST00000611331 ZCCHC6Q5VYS8 1495 aaKnown RBP15.8■□□□□ 0.12
LINC01949-202ENST00000611331 MSH5O43196 834 aa15.58■□□□□ 0.09
LINC01949-202ENST00000611331 NESP48681 1621 aa15.55■□□□□ 0.08
LINC01949-202ENST00000611331 THOC2Q8NI27 1593 aaKnown RBP15.55■□□□□ 0.08
LINC01949-202ENST00000611331 NCAPD3P42695 1498 aa15.54■□□□□ 0.08
LINC01949-202ENST00000611331 SMARCA2P51531 1590 aa15.42■□□□□ 0.06
LINC01949-202ENST00000611331 ATAD2BQ9ULI0 1458 aa15.39■□□□□ 0.05
LINC01949-202ENST00000611331 HMGXB3Q12766 1538 aa15.37■□□□□ 0.05
LINC01949-202ENST00000611331 KIF21AQ7Z4S6 1674 aa15.33■□□□□ 0.04
LINC01949-202ENST00000611331 LAMC3Q9Y6N6 1575 aa15.33■□□□□ 0.04
LINC01949-202ENST00000611331 BAZ1AQ9NRL2 1556 aaPredicted RBP15.31■□□□□ 0.04
LINC01949-202ENST00000611331 PDS5BQ9NTI5 1447 aa15.27■□□□□ 0.03
LINC01949-202ENST00000611331 OSCARQ8IYS5 282 aa15.27■□□□□ 0.03
LINC01949-202ENST00000611331 BAZ1BQ9UIG0 1483 aaKnown RBP15.22■□□□□ 0.03
LINC01949-202ENST00000611331 SMARCA4P51532 1647 aa15.19■□□□□ 0.02
LINC01949-202ENST00000611331 MRC2Q9UBG0 1479 aa15.19■□□□□ 0.02
LINC01949-202ENST00000611331 WDR62O43379 1518 aa15.17■□□□□ 0.02
LINC01949-202ENST00000611331 RIMBP3CA6NJZ7 1639 aa15.16■□□□□ 0.02
LINC01949-202ENST00000611331 RIMBP3BA6NNM3 1639 aa15.16■□□□□ 0.02
LINC01949-202ENST00000611331 RIMBP3Q9UFD9 1639 aa15.16■□□□□ 0.02
LINC01949-202ENST00000611331 TRHP20396 242 aaPredicted RBP15.07■□□□□ 0
LINC01949-202ENST00000611331 CADPSQ9ULU8 1353 aa15.04■□□□□ -0
LINC01949-202ENST00000611331 ARHGEF11O15085 1522 aa15.04■□□□□ -0
LINC01949-202ENST00000611331 PEG3Q9GZU2 1588 aa15.03■□□□□ -0
LINC01949-202ENST00000611331 CEP164Q9UPV0 1460 aa14.98□□□□□ -0.01
LINC01949-202ENST00000611331 CYB5RLQ6IPT4 315 aa14.97□□□□□ -0.01
LINC01949-202ENST00000611331 FANCD2Q9BXW9 1451 aa14.88□□□□□ -0.03
LINC01949-202ENST00000611331 ARAP1Q96P48 1450 aa14.83□□□□□ -0.03
LINC01949-202ENST00000611331 MROH2BQ7Z745 1585 aa14.82□□□□□ -0.04
LINC01949-202ENST00000611331 SCAF1Q9H7N4 1312 aaKnown RBP14.81□□□□□ -0.04
LINC01949-202ENST00000611331 URB2Q14146 1524 aaKnown RBP14.8□□□□□ -0.04
LINC01949-202ENST00000611331 PPP4R3CPQ6ZMV5 832 aa14.79□□□□□ -0.04
LINC01949-202ENST00000611331 ZNF608Q9ULD9 1512 aaPredicted RBP14.74□□□□□ -0.05
LINC01949-202ENST00000611331 CFTRP13569 1480 aa14.7□□□□□ -0.06
LINC01949-202ENST00000611331 RSF1Q96T23 1441 aaPredicted RBP14.7□□□□□ -0.06
LINC01949-202ENST00000611331 IFT140Q96RY7 1462 aa14.7□□□□□ -0.06
LINC01949-202ENST00000611331 CHD1O14646 1710 aa14.67□□□□□ -0.06
LINC01949-202ENST00000611331 ILDR1Q86SU0 546 aaPredicted RBP14.66□□□□□ -0.06
LINC01949-202ENST00000611331 EIF4G3O43432 1585 aaKnown RBP14.63□□□□□ -0.07
LINC01949-202ENST00000611331 WIZO95785 1651 aa14.62□□□□□ -0.07
LINC01949-202ENST00000611331 KCNA4P22459 653 aa14.62□□□□□ -0.07
LINC01949-202ENST00000611331 FBLN2P98095 1184 aa14.59□□□□□ -0.07
LINC01949-202ENST00000611331 MAPK8IP2Q13387 824 aaPredicted RBP14.55□□□□□ -0.08
LINC01949-202ENST00000611331 EHMT2Q96KQ7 1210 aa14.53□□□□□ -0.08
LINC01949-202ENST00000611331 AQRO60306 1485 aaKnown RBP eCLIP14.51□□□□□ -0.09
LINC01949-202ENST00000611331 TOPBP1Q92547 1522 aa14.51□□□□□ -0.09
LINC01949-202ENST00000611331 PRDM2Q13029 1718 aa14.51□□□□□ -0.09
LINC01949-202ENST00000611331 CLASP1Q7Z460 1538 aa14.47□□□□□ -0.09
LINC01949-202ENST00000611331 NCBP3Q53F19 620 aaKnown RBP14.45□□□□□ -0.1
LINC01949-202ENST00000611331 DMRT2Q9Y5R5 561 aa14.44□□□□□ -0.1
LINC01949-202ENST00000611331 TARBP1Q13395 1621 aaKnown RBP14.44□□□□□ -0.1
LINC01949-202ENST00000611331 CNKSR2Q8WXI2 1034 aa14.43□□□□□ -0.1
LINC01949-202ENST00000611331 ABCC8Q09428 1581 aa14.42□□□□□ -0.1
LINC01949-202ENST00000611331 SYNJ1O43426 1573 aa14.41□□□□□ -0.1
LINC01949-202ENST00000611331 DNMBPQ6XZF7 1577 aa14.39□□□□□ -0.11
LINC01949-202ENST00000611331 GAPVD1Q14C86 1478 aa14.39□□□□□ -0.11
LINC01949-202ENST00000611331 TOP2AP11388 1531 aaKnown RBP14.39□□□□□ -0.11
LINC01949-202ENST00000611331 SNAPC4Q5SXM2 1469 aa14.36□□□□□ -0.11
LINC01949-202ENST00000611331 CHMP7Q8WUX9 453 aaPredicted RBP14.35□□□□□ -0.11
LINC01949-202ENST00000611331 POLA1P09884 1462 aaPredicted RBP14.31□□□□□ -0.12
LINC01949-202ENST00000611331 TDRD9Q8NDG6 1382 aaKnown RBP14.3□□□□□ -0.12
LINC01949-202ENST00000611331 KDM4FA0A1W2PPD8 638 aa14.3□□□□□ -0.12
LINC01949-202ENST00000611331 MAGI1Q96QZ7 1491 aaPredicted RBP14.28□□□□□ -0.12
LINC01949-202ENST00000611331 RAD54L2Q9Y4B4 1467 aa14.27□□□□□ -0.13
LINC01949-202ENST00000611331 KIF13AQ9H1H9 1805 aa14.26□□□□□ -0.13
LINC01949-202ENST00000611331 SYNJ2O15056 1496 aa14.24□□□□□ -0.13
LINC01949-202ENST00000611331 WDR97A6NE52 1622 aa14.24□□□□□ -0.13
LINC01949-202ENST00000611331 SOGA1O94964 1423 aa14.24□□□□□ -0.13
LINC01949-202ENST00000611331 CCDC88BA6NC98 1476 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms