RNA–Protein interactions for RNA: ENST00000611306.1

LRMDA-216, Transcript of leucine rich melanocyte differentiation associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRMDA, Length 393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-216ENST00000611306 NISCHQ9Y2I1 1504 aa16.86■□□□□ 0.29
LRMDA-216ENST00000611306 CCDC180Q9P1Z9 1646 aa14.81□□□□□ -0.04
LRMDA-216ENST00000611306 ABCC9O60706 1549 aa14.72□□□□□ -0.05
LRMDA-216ENST00000611306 ZCCHC6Q5VYS8 1495 aaKnown RBP14.12□□□□□ -0.15
LRMDA-216ENST00000611306 DCAF8L2P0C7V8 631 aa13.99□□□□□ -0.17
LRMDA-216ENST00000611306 DNAJC5BQ9UF47 199 aa13.93□□□□□ -0.18
LRMDA-216ENST00000611306 DCAF1Q9Y4B6 1507 aa13.89□□□□□ -0.19
LRMDA-216ENST00000611306 NACADO15069 1562 aa13.83□□□□□ -0.2
LRMDA-216ENST00000611306 RB1CC1Q8TDY2 1594 aa13.83□□□□□ -0.2
LRMDA-216ENST00000611306 MYO15BQ96JP2 1530 aa13.8□□□□□ -0.2
LRMDA-216ENST00000611306 UNC13AQ9UPW8 1703 aa13.78□□□□□ -0.2
LRMDA-216ENST00000611306 PABPN1Q86U42 306 aaKnown RBP eCLIP13.77□□□□□ -0.21
LRMDA-216ENST00000611306 SCRIBQ14160 1630 aa13.66□□□□□ -0.22
LRMDA-216ENST00000611306 SHROOM4Q9ULL8 1493 aa13.66□□□□□ -0.22
LRMDA-216ENST00000611306 BICRAQ9NZM4 1560 aa13.56□□□□□ -0.24
LRMDA-216ENST00000611306 CC2D2AQ9P2K1 1620 aa13.26□□□□□ -0.29
LRMDA-216ENST00000611306 CECR2Q9BXF3 1484 aa13.17□□□□□ -0.3
LRMDA-216ENST00000611306 EIF4G1Q04637 1599 aaKnown RBP13.17□□□□□ -0.3
LRMDA-216ENST00000611306 MROH2BQ7Z745 1585 aa13.06□□□□□ -0.32
LRMDA-216ENST00000611306 SMARCA4P51532 1647 aa13.03□□□□□ -0.32
LRMDA-216ENST00000611306 BAZ1AQ9NRL2 1556 aaPredicted RBP13.02□□□□□ -0.33
LRMDA-216ENST00000611306 RSF1Q96T23 1441 aaPredicted RBP12.99□□□□□ -0.33
LRMDA-216ENST00000611306 SUPT5HO00267 1087 aaKnown RBP12.95□□□□□ -0.34
LRMDA-216ENST00000611306 WIZO95785 1651 aa12.94□□□□□ -0.34
LRMDA-216ENST00000611306 ATAD2BQ9ULI0 1458 aa12.86□□□□□ -0.35
LRMDA-216ENST00000611306 PEG3Q9GZU2 1588 aa12.84□□□□□ -0.35
LRMDA-216ENST00000611306 SMARCA2P51531 1590 aa12.81□□□□□ -0.36
LRMDA-216ENST00000611306 BAZ1BQ9UIG0 1483 aaKnown RBP12.78□□□□□ -0.36
LRMDA-216ENST00000611306 TOP2AP11388 1531 aaKnown RBP12.78□□□□□ -0.36
LRMDA-216ENST00000611306 NCAPD3P42695 1498 aa12.76□□□□□ -0.37
LRMDA-216ENST00000611306 HMGXB3Q12766 1538 aa12.74□□□□□ -0.37
LRMDA-216ENST00000611306 NESP48681 1621 aa12.69□□□□□ -0.38
LRMDA-216ENST00000611306 CCDC88BA6NC98 1476 aa12.63□□□□□ -0.39
LRMDA-216ENST00000611306 DNAJC5Q9H3Z4 198 aa12.61□□□□□ -0.39
LRMDA-216ENST00000611306 ERCC6Q03468 1493 aa12.6□□□□□ -0.39
LRMDA-216ENST00000611306 KIF21AQ7Z4S6 1674 aa12.52□□□□□ -0.4
LRMDA-216ENST00000611306 CUX2O14529 1486 aa12.46□□□□□ -0.41
LRMDA-216ENST00000611306 THOC2Q8NI27 1593 aaKnown RBP12.45□□□□□ -0.42
LRMDA-216ENST00000611306 CFTRP13569 1480 aa12.42□□□□□ -0.42
LRMDA-216ENST00000611306 CADPSQ9ULU8 1353 aa12.42□□□□□ -0.42
LRMDA-216ENST00000611306 LAMC3Q9Y6N6 1575 aa12.38□□□□□ -0.43
LRMDA-216ENST00000611306 PRDM2Q13029 1718 aa12.37□□□□□ -0.43
LRMDA-216ENST00000611306 ABCC8Q09428 1581 aa12.34□□□□□ -0.43
LRMDA-216ENST00000611306 FANCD2Q9BXW9 1451 aa12.32□□□□□ -0.44
LRMDA-216ENST00000611306 PDS5BQ9NTI5 1447 aa12.28□□□□□ -0.44
LRMDA-216ENST00000611306 CEP164Q9UPV0 1460 aa12.26□□□□□ -0.45
LRMDA-216ENST00000611306 SYNJ1O43426 1573 aa12.24□□□□□ -0.45
LRMDA-216ENST00000611306 CHIC1Q5VXU3 224 aa12.24□□□□□ -0.45
LRMDA-216ENST00000611306 MRC2Q9UBG0 1479 aa12.23□□□□□ -0.45
LRMDA-216ENST00000611306 CUX1P39880 1505 aa12.22□□□□□ -0.45
LRMDA-216ENST00000611306 WRNQ14191 1432 aaPredicted RBP eCLIP12.22□□□□□ -0.45
LRMDA-216ENST00000611306 TRIM41Q8WV44 630 aa12.22□□□□□ -0.45
LRMDA-216ENST00000611306 WDR62O43379 1518 aa12.21□□□□□ -0.46
LRMDA-216ENST00000611306 URB2Q14146 1524 aaKnown RBP12.21□□□□□ -0.46
LRMDA-216ENST00000611306 TOPBP1Q92547 1522 aa12.16□□□□□ -0.46
LRMDA-216ENST00000611306 TOP2BQ02880 1626 aa12.16□□□□□ -0.46
LRMDA-216ENST00000611306 DNMBPQ6XZF7 1577 aa12.16□□□□□ -0.46
LRMDA-216ENST00000611306 BIVM-ERCC5R4GMW8 1640 aa12.15□□□□□ -0.46
LRMDA-216ENST00000611306 FGD5Q6ZNL6 1462 aa12.12□□□□□ -0.47
LRMDA-216ENST00000611306 POLA1P09884 1462 aaPredicted RBP12.08□□□□□ -0.47
LRMDA-216ENST00000611306 RAD54L2Q9Y4B4 1467 aa12.08□□□□□ -0.48
LRMDA-216ENST00000611306 ZNF608Q9ULD9 1512 aaPredicted RBP12.06□□□□□ -0.48
LRMDA-216ENST00000611306 SOGA1O94964 1423 aa12.03□□□□□ -0.48
LRMDA-216ENST00000611306 RUSC2Q8N2Y8 1516 aa12.02□□□□□ -0.48
LRMDA-216ENST00000611306 WDR97A6NE52 1622 aa12□□□□□ -0.49
LRMDA-216ENST00000611306 TARBP1Q13395 1621 aaKnown RBP12□□□□□ -0.49
LRMDA-216ENST00000611306 OSCARQ8IYS5 282 aa11.99□□□□□ -0.49
LRMDA-216ENST00000611306 FAM9AQ8IZU1 332 aaPredicted RBP11.99□□□□□ -0.49
LRMDA-216ENST00000611306 ABCA10Q8WWZ4 1543 aa11.97□□□□□ -0.49
LRMDA-216ENST00000611306 IFT140Q96RY7 1462 aa11.96□□□□□ -0.49
LRMDA-216ENST00000611306 TDRD9Q8NDG6 1382 aaKnown RBP11.95□□□□□ -0.5
LRMDA-216ENST00000611306 CHD1O14646 1710 aa11.95□□□□□ -0.5
LRMDA-216ENST00000611306 RIMBP3CA6NJZ7 1639 aa11.94□□□□□ -0.5
LRMDA-216ENST00000611306 RIMBP3BA6NNM3 1639 aa11.94□□□□□ -0.5
LRMDA-216ENST00000611306 RIMBP3Q9UFD9 1639 aa11.94□□□□□ -0.5
LRMDA-216ENST00000611306 AQRO60306 1485 aaKnown RBP eCLIP11.94□□□□□ -0.5
LRMDA-216ENST00000611306 EIF4G3O43432 1585 aaKnown RBP11.93□□□□□ -0.5
LRMDA-216ENST00000611306 ABCA5Q8WWZ7 1642 aa11.93□□□□□ -0.5
LRMDA-216ENST00000611306 KIF27Q86VH2 1401 aa11.91□□□□□ -0.5
LRMDA-216ENST00000611306 GAPVD1Q14C86 1478 aa11.89□□□□□ -0.51
LRMDA-216ENST00000611306 PBRM1Q86U86 1689 aa11.88□□□□□ -0.51
LRMDA-216ENST00000611306 FBLN2P98095 1184 aa11.88□□□□□ -0.51
LRMDA-216ENST00000611306 EHMT2Q96KQ7 1210 aa11.88□□□□□ -0.51
LRMDA-216ENST00000611306 EEA1Q15075 1411 aa11.85□□□□□ -0.51
LRMDA-216ENST00000611306 IGF1RP08069 1367 aa11.84□□□□□ -0.51
LRMDA-216ENST00000611306 ARHGEF11O15085 1522 aa11.84□□□□□ -0.51
LRMDA-216ENST00000611306 CYB5RLQ6IPT4 315 aa11.83□□□□□ -0.52
LRMDA-216ENST00000611306 CSRNP3Q8WYN3 585 aa11.83□□□□□ -0.52
LRMDA-216ENST00000611306 GRIN2BQ13224 1484 aa11.83□□□□□ -0.52
LRMDA-216ENST00000611306 SNAPC4Q5SXM2 1469 aa11.83□□□□□ -0.52
LRMDA-216ENST00000611306 ERICH3Q5RHP9 1530 aa11.81□□□□□ -0.52
LRMDA-216ENST00000611306 ADAMTS12P58397 1594 aa11.8□□□□□ -0.52
LRMDA-216ENST00000611306 PRXQ9BXM0 1461 aa11.79□□□□□ -0.52
LRMDA-216ENST00000611306 RAPGEF2Q9Y4G8 1499 aa11.79□□□□□ -0.52
LRMDA-216ENST00000611306 LOC105371045A0A1W2PR82 267 aa11.79□□□□□ -0.52
LRMDA-216ENST00000611306 KIF21BO75037 1637 aa11.78□□□□□ -0.52
LRMDA-216ENST00000611306 CUL7Q14999 1698 aa11.78□□□□□ -0.52
LRMDA-216ENST00000611306 CARMIL1Q5VZK9 1371 aa11.77□□□□□ -0.53
LRMDA-216ENST00000611306 ARAP1Q96P48 1450 aa11.75□□□□□ -0.53
LRMDA-216ENST00000611306 FHAD1B1AJZ9 1412 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms