RNA–Protein interactions for RNA: ENST00000611138.1

FAM228B-206, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 2

Gene FAM228B, Length 362 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-206ENST00000611138 AEBP2Q6ZN18 517 aaPredicted RBP21.53■■□□□ 1.04
FAM228B-206ENST00000611138 NISCHQ9Y2I1 1504 aa20.58■□□□□ 0.89
FAM228B-206ENST00000611138 CHIC1Q5VXU3 224 aa20.15■□□□□ 0.82
FAM228B-206ENST00000611138 SENP3Q9H4L4 574 aaPredicted RBP18.59■□□□□ 0.57
FAM228B-206ENST00000611138 POTEDQ86YR6 584 aa18.34■□□□□ 0.53
FAM228B-206ENST00000611138 CCDC180Q9P1Z9 1646 aa18.28■□□□□ 0.52
FAM228B-206ENST00000611138 PHF23Q9BUL5 403 aaPredicted RBP18.19■□□□□ 0.5
FAM228B-206ENST00000611138 ABCC9O60706 1549 aa17.62■□□□□ 0.41
FAM228B-206ENST00000611138 FOXD1Q16676 465 aa17.45■□□□□ 0.38
FAM228B-206ENST00000611138 ZCCHC6Q5VYS8 1495 aaKnown RBP17.21■□□□□ 0.35
FAM228B-206ENST00000611138 DCAF8L2P0C7V8 631 aa17.08■□□□□ 0.32
FAM228B-206ENST00000611138 NACADO15069 1562 aa17.06■□□□□ 0.32
FAM228B-206ENST00000611138 RB1CC1Q8TDY2 1594 aa17.05■□□□□ 0.32
FAM228B-206ENST00000611138 DCAF1Q9Y4B6 1507 aa17.01■□□□□ 0.31
FAM228B-206ENST00000611138 MYO15BQ96JP2 1530 aa16.97■□□□□ 0.31
FAM228B-206ENST00000611138 UNC13AQ9UPW8 1703 aa16.8■□□□□ 0.28
FAM228B-206ENST00000611138 MSH5O43196 834 aa16.79■□□□□ 0.28
FAM228B-206ENST00000611138 SCRIBQ14160 1630 aa16.71■□□□□ 0.27
FAM228B-206ENST00000611138 BICRAQ9NZM4 1560 aa16.54■□□□□ 0.24
FAM228B-206ENST00000611138 PABPN1Q86U42 306 aaKnown RBP eCLIP16.45■□□□□ 0.22
FAM228B-206ENST00000611138 SHROOM4Q9ULL8 1493 aa16.44■□□□□ 0.22
FAM228B-206ENST00000611138 EIF4G1Q04637 1599 aaKnown RBP16.08■□□□□ 0.16
FAM228B-206ENST00000611138 PIAS4Q8N2W9 510 aaPredicted RBP16.06■□□□□ 0.16
FAM228B-206ENST00000611138 CECR2Q9BXF3 1484 aa16.02■□□□□ 0.15
FAM228B-206ENST00000611138 SMARCA4P51532 1647 aa15.98■□□□□ 0.15
FAM228B-206ENST00000611138 CC2D2AQ9P2K1 1620 aa15.97■□□□□ 0.15
FAM228B-206ENST00000611138 BAZ1AQ9NRL2 1556 aaPredicted RBP15.96■□□□□ 0.14
FAM228B-206ENST00000611138 MROH2BQ7Z745 1585 aa15.89■□□□□ 0.13
FAM228B-206ENST00000611138 DNAJC5BQ9UF47 199 aa15.88■□□□□ 0.13
FAM228B-206ENST00000611138 WIZO95785 1651 aa15.79■□□□□ 0.12
FAM228B-206ENST00000611138 SMARCA2P51531 1590 aa15.79■□□□□ 0.12
FAM228B-206ENST00000611138 PEG3Q9GZU2 1588 aa15.77■□□□□ 0.11
FAM228B-206ENST00000611138 ATAD2BQ9ULI0 1458 aa15.76■□□□□ 0.11
FAM228B-206ENST00000611138 RSF1Q96T23 1441 aaPredicted RBP15.74■□□□□ 0.11
FAM228B-206ENST00000611138 HMGXB3Q12766 1538 aa15.69■□□□□ 0.1
FAM228B-206ENST00000611138 NCAPD3P42695 1498 aa15.68■□□□□ 0.1
FAM228B-206ENST00000611138 BAZ1BQ9UIG0 1483 aaKnown RBP15.68■□□□□ 0.1
FAM228B-206ENST00000611138 TOP2AP11388 1531 aaKnown RBP15.59■□□□□ 0.09
FAM228B-206ENST00000611138 SUPT5HO00267 1087 aaKnown RBP15.54■□□□□ 0.08
FAM228B-206ENST00000611138 PPP6R1Q9UPN7 881 aa15.42■□□□□ 0.06
FAM228B-206ENST00000611138 CCDC88BA6NC98 1476 aa15.37■□□□□ 0.05
FAM228B-206ENST00000611138 ADRA2BP18089 450 aa15.34■□□□□ 0.05
FAM228B-206ENST00000611138 NESP48681 1621 aa15.32■□□□□ 0.04
FAM228B-206ENST00000611138 LAMC3Q9Y6N6 1575 aa15.31■□□□□ 0.04
FAM228B-206ENST00000611138 PRDM2Q13029 1718 aa15.31■□□□□ 0.04
FAM228B-206ENST00000611138 KIF21AQ7Z4S6 1674 aa15.25■□□□□ 0.03
FAM228B-206ENST00000611138 CADPSQ9ULU8 1353 aa15.24■□□□□ 0.03
FAM228B-206ENST00000611138 CFTRP13569 1480 aa15.21■□□□□ 0.03
FAM228B-206ENST00000611138 ERCC6Q03468 1493 aa15.16■□□□□ 0.02
FAM228B-206ENST00000611138 CACNB1Q02641 598 aaPredicted RBP15.16■□□□□ 0.02
FAM228B-206ENST00000611138 PDS5BQ9NTI5 1447 aa15.14■□□□□ 0.01
FAM228B-206ENST00000611138 FANCD2Q9BXW9 1451 aa15.12■□□□□ 0.01
FAM228B-206ENST00000611138 CEP164Q9UPV0 1460 aa15.09■□□□□ 0.01
FAM228B-206ENST00000611138 THOC2Q8NI27 1593 aaKnown RBP15.08■□□□□ 0
FAM228B-206ENST00000611138 MRC2Q9UBG0 1479 aa15.01□□□□□ -0.01
FAM228B-206ENST00000611138 WDR62O43379 1518 aa14.97□□□□□ -0.01
FAM228B-206ENST00000611138 URB2Q14146 1524 aaKnown RBP14.97□□□□□ -0.01
FAM228B-206ENST00000611138 PLPPR3Q6T4P5 718 aa14.96□□□□□ -0.01
FAM228B-206ENST00000611138 ABCC8Q09428 1581 aa14.95□□□□□ -0.02
FAM228B-206ENST00000611138 DNMBPQ6XZF7 1577 aa14.94□□□□□ -0.02
FAM228B-206ENST00000611138 TOPBP1Q92547 1522 aa14.92□□□□□ -0.02
FAM228B-206ENST00000611138 CUX1P39880 1505 aa14.9□□□□□ -0.02
FAM228B-206ENST00000611138 SYNJ1O43426 1573 aa14.88□□□□□ -0.03
FAM228B-206ENST00000611138 CUX2O14529 1486 aa14.88□□□□□ -0.03
FAM228B-206ENST00000611138 BIVM-ERCC5R4GMW8 1640 aa14.88□□□□□ -0.03
FAM228B-206ENST00000611138 WRNQ14191 1432 aaPredicted RBP eCLIP14.85□□□□□ -0.03
FAM228B-206ENST00000611138 TOP2BQ02880 1626 aa14.84□□□□□ -0.03
FAM228B-206ENST00000611138 FGD5Q6ZNL6 1462 aa14.81□□□□□ -0.04
FAM228B-206ENST00000611138 POLA1P09884 1462 aaPredicted RBP14.8□□□□□ -0.04
FAM228B-206ENST00000611138 WDR97A6NE52 1622 aa14.77□□□□□ -0.05
FAM228B-206ENST00000611138 TARBP1Q13395 1621 aaKnown RBP14.77□□□□□ -0.05
FAM228B-206ENST00000611138 RAD54L2Q9Y4B4 1467 aa14.74□□□□□ -0.05
FAM228B-206ENST00000611138 IFT140Q96RY7 1462 aa14.73□□□□□ -0.05
FAM228B-206ENST00000611138 EIF4G3O43432 1585 aaKnown RBP14.7□□□□□ -0.06
FAM228B-206ENST00000611138 SOGA1O94964 1423 aa14.7□□□□□ -0.06
FAM228B-206ENST00000611138 ZNF608Q9ULD9 1512 aaPredicted RBP14.68□□□□□ -0.06
FAM228B-206ENST00000611138 PBRM1Q86U86 1689 aa14.65□□□□□ -0.06
FAM228B-206ENST00000611138 TRIM41Q8WV44 630 aa14.64□□□□□ -0.07
FAM228B-206ENST00000611138 ABCA10Q8WWZ4 1543 aa14.64□□□□□ -0.07
FAM228B-206ENST00000611138 ABCA5Q8WWZ7 1642 aa14.63□□□□□ -0.07
FAM228B-206ENST00000611138 TDRD9Q8NDG6 1382 aaKnown RBP14.6□□□□□ -0.07
FAM228B-206ENST00000611138 AQRO60306 1485 aaKnown RBP eCLIP14.6□□□□□ -0.07
FAM228B-206ENST00000611138 GAPVD1Q14C86 1478 aa14.57□□□□□ -0.08
FAM228B-206ENST00000611138 DMRT2Q9Y5R5 561 aa14.54□□□□□ -0.08
FAM228B-206ENST00000611138 GRIN2BQ13224 1484 aa14.52□□□□□ -0.08
FAM228B-206ENST00000611138 CHD1O14646 1710 aa14.52□□□□□ -0.09
FAM228B-206ENST00000611138 KIF27Q86VH2 1401 aa14.51□□□□□ -0.09
FAM228B-206ENST00000611138 SNAPC4Q5SXM2 1469 aa14.5□□□□□ -0.09
FAM228B-206ENST00000611138 RUSC2Q8N2Y8 1516 aa14.5□□□□□ -0.09
FAM228B-206ENST00000611138 ERICH3Q5RHP9 1530 aa14.49□□□□□ -0.09
FAM228B-206ENST00000611138 ADAMTS12P58397 1594 aa14.48□□□□□ -0.09
FAM228B-206ENST00000611138 CUL7Q14999 1698 aa14.46□□□□□ -0.09
FAM228B-206ENST00000611138 MAGI1Q96QZ7 1491 aaPredicted RBP14.46□□□□□ -0.09
FAM228B-206ENST00000611138 MAPK8IP2Q13387 824 aaPredicted RBP14.44□□□□□ -0.1
FAM228B-206ENST00000611138 SYNJ2O15056 1496 aa14.41□□□□□ -0.1
FAM228B-206ENST00000611138 IGF1RP08069 1367 aa14.38□□□□□ -0.11
FAM228B-206ENST00000611138 FAM9AQ8IZU1 332 aaPredicted RBP14.38□□□□□ -0.11
FAM228B-206ENST00000611138 FHAD1B1AJZ9 1412 aa14.38□□□□□ -0.11
FAM228B-206ENST00000611138 FBLN2P98095 1184 aa14.37□□□□□ -0.11
FAM228B-206ENST00000611138 EEA1Q15075 1411 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms