RNA–Protein interactions for RNA: ENST00000606815.1

RN7SKP4-201, Transcript of RNA, 7SK small nuclear pseudogene 4, humanhuman

BASIC

Gene RN7SKP4, Length 322 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP4-201ENST00000606815 NISCHQ9Y2I1 1504 aa21.81■■□□□ 1.08
RN7SKP4-201ENST00000606815 CCDC180Q9P1Z9 1646 aa19.04■□□□□ 0.64
RN7SKP4-201ENST00000606815 ABCC9O60706 1549 aa18.64■□□□□ 0.58
RN7SKP4-201ENST00000606815 ZCCHC6Q5VYS8 1495 aaKnown RBP18.27■□□□□ 0.52
RN7SKP4-201ENST00000606815 DCAF1Q9Y4B6 1507 aa18.12■□□□□ 0.49
RN7SKP4-201ENST00000606815 DCAF8L2P0C7V8 631 aa18.01■□□□□ 0.47
RN7SKP4-201ENST00000606815 MYO15BQ96JP2 1530 aa18■□□□□ 0.47
RN7SKP4-201ENST00000606815 NACADO15069 1562 aa17.85■□□□□ 0.45
RN7SKP4-201ENST00000606815 RB1CC1Q8TDY2 1594 aa17.74■□□□□ 0.43
RN7SKP4-201ENST00000606815 SHROOM4Q9ULL8 1493 aa17.55■□□□□ 0.4
RN7SKP4-201ENST00000606815 PABPN1Q86U42 306 aaKnown RBP eCLIP17.5■□□□□ 0.39
RN7SKP4-201ENST00000606815 SCRIBQ14160 1630 aa17.39■□□□□ 0.37
RN7SKP4-201ENST00000606815 DNAJC5BQ9UF47 199 aa17.36■□□□□ 0.37
RN7SKP4-201ENST00000606815 UNC13AQ9UPW8 1703 aa17.3■□□□□ 0.36
RN7SKP4-201ENST00000606815 BICRAQ9NZM4 1560 aa17.16■□□□□ 0.34
RN7SKP4-201ENST00000606815 CECR2Q9BXF3 1484 aa16.89■□□□□ 0.29
RN7SKP4-201ENST00000606815 SUPT5HO00267 1087 aaKnown RBP16.89■□□□□ 0.29
RN7SKP4-201ENST00000606815 RSF1Q96T23 1441 aaPredicted RBP16.87■□□□□ 0.29
RN7SKP4-201ENST00000606815 BAZ1AQ9NRL2 1556 aaPredicted RBP16.85■□□□□ 0.29
RN7SKP4-201ENST00000606815 CC2D2AQ9P2K1 1620 aa16.78■□□□□ 0.28
RN7SKP4-201ENST00000606815 MROH2BQ7Z745 1585 aa16.78■□□□□ 0.28
RN7SKP4-201ENST00000606815 EIF4G1Q04637 1599 aaKnown RBP16.76■□□□□ 0.27
RN7SKP4-201ENST00000606815 SMARCA4P51532 1647 aa16.73■□□□□ 0.27
RN7SKP4-201ENST00000606815 PEG3Q9GZU2 1588 aa16.61■□□□□ 0.25
RN7SKP4-201ENST00000606815 WIZO95785 1651 aa16.57■□□□□ 0.24
RN7SKP4-201ENST00000606815 ATAD2BQ9ULI0 1458 aa16.57■□□□□ 0.24
RN7SKP4-201ENST00000606815 SMARCA2P51531 1590 aa16.56■□□□□ 0.24
RN7SKP4-201ENST00000606815 NCAPD3P42695 1498 aa16.51■□□□□ 0.23
RN7SKP4-201ENST00000606815 TOP2AP11388 1531 aaKnown RBP16.49■□□□□ 0.23
RN7SKP4-201ENST00000606815 BAZ1BQ9UIG0 1483 aaKnown RBP16.43■□□□□ 0.22
RN7SKP4-201ENST00000606815 HMGXB3Q12766 1538 aa16.41■□□□□ 0.22
RN7SKP4-201ENST00000606815 CCDC88BA6NC98 1476 aa16.34■□□□□ 0.21
RN7SKP4-201ENST00000606815 CHIC1Q5VXU3 224 aa16.17■□□□□ 0.18
RN7SKP4-201ENST00000606815 ERCC6Q03468 1493 aa16.1■□□□□ 0.17
RN7SKP4-201ENST00000606815 CADPSQ9ULU8 1353 aa16.07■□□□□ 0.16
RN7SKP4-201ENST00000606815 CFTRP13569 1480 aa16.07■□□□□ 0.16
RN7SKP4-201ENST00000606815 NESP48681 1621 aa16.04■□□□□ 0.16
RN7SKP4-201ENST00000606815 TRIM41Q8WV44 630 aa15.99■□□□□ 0.15
RN7SKP4-201ENST00000606815 LAMC3Q9Y6N6 1575 aa15.9■□□□□ 0.14
RN7SKP4-201ENST00000606815 CUX2O14529 1486 aa15.9■□□□□ 0.14
RN7SKP4-201ENST00000606815 WRNQ14191 1432 aaPredicted RBP eCLIP15.88■□□□□ 0.13
RN7SKP4-201ENST00000606815 PDS5BQ9NTI5 1447 aa15.88■□□□□ 0.13
RN7SKP4-201ENST00000606815 FANCD2Q9BXW9 1451 aa15.82■□□□□ 0.12
RN7SKP4-201ENST00000606815 ABCC8Q09428 1581 aa15.82■□□□□ 0.12
RN7SKP4-201ENST00000606815 PRDM2Q13029 1718 aa15.81■□□□□ 0.12
RN7SKP4-201ENST00000606815 DNAJC5Q9H3Z4 198 aa15.8■□□□□ 0.12
RN7SKP4-201ENST00000606815 KIF21AQ7Z4S6 1674 aa15.78■□□□□ 0.12
RN7SKP4-201ENST00000606815 TOP2BQ02880 1626 aa15.73■□□□□ 0.11
RN7SKP4-201ENST00000606815 CEP164Q9UPV0 1460 aa15.72■□□□□ 0.11
RN7SKP4-201ENST00000606815 THOC2Q8NI27 1593 aaKnown RBP15.72■□□□□ 0.11
RN7SKP4-201ENST00000606815 SYNJ1O43426 1573 aa15.71■□□□□ 0.11
RN7SKP4-201ENST00000606815 CUX1P39880 1505 aa15.7■□□□□ 0.1
RN7SKP4-201ENST00000606815 MRC2Q9UBG0 1479 aa15.68■□□□□ 0.1
RN7SKP4-201ENST00000606815 BIVM-ERCC5R4GMW8 1640 aa15.68■□□□□ 0.1
RN7SKP4-201ENST00000606815 EEA1Q15075 1411 aa15.68■□□□□ 0.1
RN7SKP4-201ENST00000606815 DNMBPQ6XZF7 1577 aa15.64■□□□□ 0.09
RN7SKP4-201ENST00000606815 TOPBP1Q92547 1522 aa15.62■□□□□ 0.09
RN7SKP4-201ENST00000606815 SOGA1O94964 1423 aa15.59■□□□□ 0.09
RN7SKP4-201ENST00000606815 URB2Q14146 1524 aaKnown RBP15.58■□□□□ 0.09
RN7SKP4-201ENST00000606815 CSRNP3Q8WYN3 585 aa15.57■□□□□ 0.08
RN7SKP4-201ENST00000606815 WDR62O43379 1518 aa15.57■□□□□ 0.08
RN7SKP4-201ENST00000606815 FAM9AQ8IZU1 332 aaPredicted RBP15.56■□□□□ 0.08
RN7SKP4-201ENST00000606815 FGD5Q6ZNL6 1462 aa15.56■□□□□ 0.08
RN7SKP4-201ENST00000606815 KIF27Q86VH2 1401 aa15.53■□□□□ 0.08
RN7SKP4-201ENST00000606815 POLA1P09884 1462 aaPredicted RBP15.52■□□□□ 0.08
RN7SKP4-201ENST00000606815 ABCA10Q8WWZ4 1543 aa15.49■□□□□ 0.07
RN7SKP4-201ENST00000606815 RUSC2Q8N2Y8 1516 aa15.48■□□□□ 0.07
RN7SKP4-201ENST00000606815 LOC105371045A0A1W2PR82 267 aa15.47■□□□□ 0.07
RN7SKP4-201ENST00000606815 RAD54L2Q9Y4B4 1467 aa15.44■□□□□ 0.06
RN7SKP4-201ENST00000606815 IGF1RP08069 1367 aa15.42■□□□□ 0.06
RN7SKP4-201ENST00000606815 IFT140Q96RY7 1462 aa15.41■□□□□ 0.06
RN7SKP4-201ENST00000606815 OSCARQ8IYS5 282 aa15.38■□□□□ 0.05
RN7SKP4-201ENST00000606815 PRXQ9BXM0 1461 aa15.38■□□□□ 0.05
RN7SKP4-201ENST00000606815 GOLGA3Q08378 1498 aa15.36■□□□□ 0.05
RN7SKP4-201ENST00000606815 TARBP1Q13395 1621 aaKnown RBP15.35■□□□□ 0.05
RN7SKP4-201ENST00000606815 KIF21BO75037 1637 aa15.35■□□□□ 0.05
RN7SKP4-201ENST00000606815 TDRD9Q8NDG6 1382 aaKnown RBP15.35■□□□□ 0.05
RN7SKP4-201ENST00000606815 TNIKQ9UKE5 1360 aa15.35■□□□□ 0.05
RN7SKP4-201ENST00000606815 GAPVD1Q14C86 1478 aa15.33■□□□□ 0.05
RN7SKP4-201ENST00000606815 WDR97A6NE52 1622 aa15.33■□□□□ 0.04
RN7SKP4-201ENST00000606815 CARMIL1Q5VZK9 1371 aa15.33■□□□□ 0.04
RN7SKP4-201ENST00000606815 UBTFP17480 764 aaKnown RBP15.31■□□□□ 0.04
RN7SKP4-201ENST00000606815 ERICH3Q5RHP9 1530 aa15.31■□□□□ 0.04
RN7SKP4-201ENST00000606815 ZNF608Q9ULD9 1512 aaPredicted RBP15.31■□□□□ 0.04
RN7SKP4-201ENST00000606815 ABCA5Q8WWZ7 1642 aa15.28■□□□□ 0.04
RN7SKP4-201ENST00000606815 FBLN2P98095 1184 aa15.28■□□□□ 0.04
RN7SKP4-201ENST00000606815 RAPGEF2Q9Y4G8 1499 aa15.27■□□□□ 0.04
RN7SKP4-201ENST00000606815 AQRO60306 1485 aaKnown RBP eCLIP15.26■□□□□ 0.03
RN7SKP4-201ENST00000606815 GRIN2BQ13224 1484 aa15.26■□□□□ 0.03
RN7SKP4-201ENST00000606815 EHMT2Q96KQ7 1210 aa15.24■□□□□ 0.03
RN7SKP4-201ENST00000606815 CUL7Q14999 1698 aa15.22■□□□□ 0.03
RN7SKP4-201ENST00000606815 FHAD1B1AJZ9 1412 aa15.21■□□□□ 0.03
RN7SKP4-201ENST00000606815 EIF4G3O43432 1585 aaKnown RBP15.16■□□□□ 0.02
RN7SKP4-201ENST00000606815 CEP162Q5TB80 1403 aa15.16■□□□□ 0.02
RN7SKP4-201ENST00000606815 MAGI1Q96QZ7 1491 aaPredicted RBP15.15■□□□□ 0.02
RN7SKP4-201ENST00000606815 CHMP7Q8WUX9 453 aaPredicted RBP15.14■□□□□ 0.01
RN7SKP4-201ENST00000606815 PBRM1Q86U86 1689 aa15.11■□□□□ 0.01
RN7SKP4-201ENST00000606815 CLIP1P30622 1438 aa15.1■□□□□ 0.01
RN7SKP4-201ENST00000606815 SNAPC4Q5SXM2 1469 aa15.1■□□□□ 0.01
RN7SKP4-201ENST00000606815 ADAMTS12P58397 1594 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms