RNA–Protein interactions for RNA: ENST00000604796.1

MARK3P1-201, Transcript of microtubule affinity regulating kinase 3 pseudogene 1, humanhuman

BASIC

Gene MARK3P1, Length 643 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3P1-201ENST00000604796 AEBP2Q6ZN18 517 aaPredicted RBP20.91■□□□□ 0.94
MARK3P1-201ENST00000604796 CHIC1Q5VXU3 224 aa20.27■□□□□ 0.84
MARK3P1-201ENST00000604796 NISCHQ9Y2I1 1504 aa18.73■□□□□ 0.59
MARK3P1-201ENST00000604796 PHF23Q9BUL5 403 aaPredicted RBP17.83■□□□□ 0.44
MARK3P1-201ENST00000604796 SENP3Q9H4L4 574 aaPredicted RBP17.73■□□□□ 0.43
MARK3P1-201ENST00000604796 CCDC180Q9P1Z9 1646 aa16.63■□□□□ 0.25
MARK3P1-201ENST00000604796 FOXD1Q16676 465 aa16.5■□□□□ 0.23
MARK3P1-201ENST00000604796 PLPPR3Q6T4P5 718 aa16.38■□□□□ 0.21
MARK3P1-201ENST00000604796 ABCC9O60706 1549 aa16.09■□□□□ 0.17
MARK3P1-201ENST00000604796 PPP6R1Q9UPN7 881 aa15.78■□□□□ 0.12
MARK3P1-201ENST00000604796 ADRA2BP18089 450 aa15.75■□□□□ 0.11
MARK3P1-201ENST00000604796 ZCCHC6Q5VYS8 1495 aaKnown RBP15.65■□□□□ 0.1
MARK3P1-201ENST00000604796 DCAF8L2P0C7V8 631 aa15.59■□□□□ 0.09
MARK3P1-201ENST00000604796 NACADO15069 1562 aa15.53■□□□□ 0.08
MARK3P1-201ENST00000604796 RB1CC1Q8TDY2 1594 aa15.53■□□□□ 0.08
MARK3P1-201ENST00000604796 PIAS4Q8N2W9 510 aaPredicted RBP15.51■□□□□ 0.07
MARK3P1-201ENST00000604796 DCAF1Q9Y4B6 1507 aa15.46■□□□□ 0.07
MARK3P1-201ENST00000604796 MYO15BQ96JP2 1530 aa15.44■□□□□ 0.06
MARK3P1-201ENST00000604796 UNC13AQ9UPW8 1703 aa15.31■□□□□ 0.04
MARK3P1-201ENST00000604796 MSH5O43196 834 aa15.24■□□□□ 0.03
MARK3P1-201ENST00000604796 SCRIBQ14160 1630 aa15.22■□□□□ 0.03
MARK3P1-201ENST00000604796 BICRAQ9NZM4 1560 aa15.07■□□□□ 0
MARK3P1-201ENST00000604796 PABPN1Q86U42 306 aaKnown RBP eCLIP15.04■□□□□ -0
MARK3P1-201ENST00000604796 SHROOM4Q9ULL8 1493 aa14.97□□□□□ -0.01
MARK3P1-201ENST00000604796 EIF4G1Q04637 1599 aaKnown RBP14.66□□□□□ -0.06
MARK3P1-201ENST00000604796 CECR2Q9BXF3 1484 aa14.59□□□□□ -0.07
MARK3P1-201ENST00000604796 CC2D2AQ9P2K1 1620 aa14.58□□□□□ -0.08
MARK3P1-201ENST00000604796 DNAJC5BQ9UF47 199 aa14.56□□□□□ -0.08
MARK3P1-201ENST00000604796 SMARCA4P51532 1647 aa14.54□□□□□ -0.08
MARK3P1-201ENST00000604796 BAZ1AQ9NRL2 1556 aaPredicted RBP14.51□□□□□ -0.09
MARK3P1-201ENST00000604796 MROH2BQ7Z745 1585 aa14.47□□□□□ -0.09
MARK3P1-201ENST00000604796 PPP4R3CPQ6ZMV5 832 aa14.43□□□□□ -0.1
MARK3P1-201ENST00000604796 WIZO95785 1651 aa14.37□□□□□ -0.11
MARK3P1-201ENST00000604796 ATAD2BQ9ULI0 1458 aa14.37□□□□□ -0.11
MARK3P1-201ENST00000604796 SMARCA2P51531 1590 aa14.36□□□□□ -0.11
MARK3P1-201ENST00000604796 SCAF1Q9H7N4 1312 aaKnown RBP14.36□□□□□ -0.11
MARK3P1-201ENST00000604796 PEG3Q9GZU2 1588 aa14.34□□□□□ -0.11
MARK3P1-201ENST00000604796 MAPK8IP2Q13387 824 aaPredicted RBP14.34□□□□□ -0.11
MARK3P1-201ENST00000604796 RSF1Q96T23 1441 aaPredicted RBP14.32□□□□□ -0.12
MARK3P1-201ENST00000604796 NCAPD3P42695 1498 aa14.29□□□□□ -0.12
MARK3P1-201ENST00000604796 HMGXB3Q12766 1538 aa14.28□□□□□ -0.12
MARK3P1-201ENST00000604796 BAZ1BQ9UIG0 1483 aaKnown RBP14.27□□□□□ -0.12
MARK3P1-201ENST00000604796 TOP2AP11388 1531 aaKnown RBP14.17□□□□□ -0.14
MARK3P1-201ENST00000604796 POTEDQ86YR6 584 aa14.14□□□□□ -0.15
MARK3P1-201ENST00000604796 DMRT2Q9Y5R5 561 aa14.14□□□□□ -0.15
MARK3P1-201ENST00000604796 SUPT5HO00267 1087 aaKnown RBP14.13□□□□□ -0.15
MARK3P1-201ENST00000604796 CNKSR2Q8WXI2 1034 aa14.04□□□□□ -0.16
MARK3P1-201ENST00000604796 CCDC88BA6NC98 1476 aa13.99□□□□□ -0.17
MARK3P1-201ENST00000604796 NESP48681 1621 aa13.98□□□□□ -0.17
MARK3P1-201ENST00000604796 NCBP3Q53F19 620 aaKnown RBP13.98□□□□□ -0.17
MARK3P1-201ENST00000604796 KCNA4P22459 653 aa13.95□□□□□ -0.18
MARK3P1-201ENST00000604796 LAMC3Q9Y6N6 1575 aa13.95□□□□□ -0.18
MARK3P1-201ENST00000604796 PRDM2Q13029 1718 aa13.92□□□□□ -0.18
MARK3P1-201ENST00000604796 KIF21AQ7Z4S6 1674 aa13.89□□□□□ -0.19
MARK3P1-201ENST00000604796 CADPSQ9ULU8 1353 aa13.89□□□□□ -0.19
MARK3P1-201ENST00000604796 CFTRP13569 1480 aa13.86□□□□□ -0.19
MARK3P1-201ENST00000604796 ERCC6Q03468 1493 aa13.84□□□□□ -0.19
MARK3P1-201ENST00000604796 NPM3O75607 178 aaKnown RBP13.82□□□□□ -0.2
MARK3P1-201ENST00000604796 RNF216Q9NWF9 866 aaPredicted RBP13.8□□□□□ -0.2
MARK3P1-201ENST00000604796 PDS5BQ9NTI5 1447 aa13.8□□□□□ -0.2
MARK3P1-201ENST00000604796 HOXD11P31277 338 aaPredicted RBP13.79□□□□□ -0.2
MARK3P1-201ENST00000604796 FANCD2Q9BXW9 1451 aa13.78□□□□□ -0.2
MARK3P1-201ENST00000604796 THOC2Q8NI27 1593 aaKnown RBP13.75□□□□□ -0.21
MARK3P1-201ENST00000604796 CEP164Q9UPV0 1460 aa13.75□□□□□ -0.21
MARK3P1-201ENST00000604796 MRC2Q9UBG0 1479 aa13.68□□□□□ -0.22
MARK3P1-201ENST00000604796 WDR62O43379 1518 aa13.64□□□□□ -0.23
MARK3P1-201ENST00000604796 URB2Q14146 1524 aaKnown RBP13.64□□□□□ -0.23
MARK3P1-201ENST00000604796 ABCC8Q09428 1581 aa13.6□□□□□ -0.23
MARK3P1-201ENST00000604796 DNMBPQ6XZF7 1577 aa13.6□□□□□ -0.23
MARK3P1-201ENST00000604796 CUX2O14529 1486 aa13.59□□□□□ -0.23
MARK3P1-201ENST00000604796 TOPBP1Q92547 1522 aa13.59□□□□□ -0.23
MARK3P1-201ENST00000604796 CUX1P39880 1505 aa13.56□□□□□ -0.24
MARK3P1-201ENST00000604796 DCAF8L1A6NGE4 600 aa13.53□□□□□ -0.24
MARK3P1-201ENST00000604796 SYNJ1O43426 1573 aa13.53□□□□□ -0.24
MARK3P1-201ENST00000604796 BIVM-ERCC5R4GMW8 1640 aa13.52□□□□□ -0.25
MARK3P1-201ENST00000604796 WRNQ14191 1432 aaPredicted RBP eCLIP13.51□□□□□ -0.25
MARK3P1-201ENST00000604796 TOP2BQ02880 1626 aa13.49□□□□□ -0.25
MARK3P1-201ENST00000604796 FGD5Q6ZNL6 1462 aa13.48□□□□□ -0.25
MARK3P1-201ENST00000604796 POLA1P09884 1462 aaPredicted RBP13.48□□□□□ -0.25
MARK3P1-201ENST00000604796 TARBP1Q13395 1621 aaKnown RBP13.44□□□□□ -0.26
MARK3P1-201ENST00000604796 RAD54L2Q9Y4B4 1467 aa13.43□□□□□ -0.26
MARK3P1-201ENST00000604796 WDR97A6NE52 1622 aa13.42□□□□□ -0.26
MARK3P1-201ENST00000604796 IFT140Q96RY7 1462 aa13.42□□□□□ -0.26
MARK3P1-201ENST00000604796 SOGA1O94964 1423 aa13.4□□□□□ -0.26
MARK3P1-201ENST00000604796 ZNF608Q9ULD9 1512 aaPredicted RBP13.39□□□□□ -0.27
MARK3P1-201ENST00000604796 EIF4G3O43432 1585 aaKnown RBP13.39□□□□□ -0.27
MARK3P1-201ENST00000604796 PBRM1Q86U86 1689 aa13.34□□□□□ -0.27
MARK3P1-201ENST00000604796 ABCA10Q8WWZ4 1543 aa13.33□□□□□ -0.28
MARK3P1-201ENST00000604796 AQRO60306 1485 aaKnown RBP eCLIP13.32□□□□□ -0.28
MARK3P1-201ENST00000604796 TDRD9Q8NDG6 1382 aaKnown RBP13.32□□□□□ -0.28
MARK3P1-201ENST00000604796 ABCA5Q8WWZ7 1642 aa13.31□□□□□ -0.28
MARK3P1-201ENST00000604796 TRIM41Q8WV44 630 aa13.3□□□□□ -0.28
MARK3P1-201ENST00000604796 GAPVD1Q14C86 1478 aa13.26□□□□□ -0.29
MARK3P1-201ENST00000604796 SLC4A1APQ9BWU0 796 aaKnown RBP13.25□□□□□ -0.29
MARK3P1-201ENST00000604796 CHD1O14646 1710 aa13.23□□□□□ -0.29
MARK3P1-201ENST00000604796 GRIN2BQ13224 1484 aa13.23□□□□□ -0.29
MARK3P1-201ENST00000604796 SNAPC4Q5SXM2 1469 aa13.23□□□□□ -0.29
MARK3P1-201ENST00000604796 KIF27Q86VH2 1401 aa13.2□□□□□ -0.3
MARK3P1-201ENST00000604796 RUSC2Q8N2Y8 1516 aa13.19□□□□□ -0.3
MARK3P1-201ENST00000604796 ADAMTS12P58397 1594 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms