RNA–Protein interactions for RNA: ENST00000604678.1

AL358335.3-201, humanhuman

BASIC

Gene AL358335.3, Length 327 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL358335.3-201ENST00000604678 NISCHQ9Y2I1 1504 aa18.93■□□□□ 0.62
AL358335.3-201ENST00000604678 CCDC180Q9P1Z9 1646 aa16.64■□□□□ 0.25
AL358335.3-201ENST00000604678 ABCC9O60706 1549 aa15.95■□□□□ 0.14
AL358335.3-201ENST00000604678 ZCCHC6Q5VYS8 1495 aaKnown RBP15.91■□□□□ 0.14
AL358335.3-201ENST00000604678 DCAF1Q9Y4B6 1507 aa15.69■□□□□ 0.1
AL358335.3-201ENST00000604678 MYO15BQ96JP2 1530 aa15.55■□□□□ 0.08
AL358335.3-201ENST00000604678 DCAF8L2P0C7V8 631 aa15.55■□□□□ 0.08
AL358335.3-201ENST00000604678 NACADO15069 1562 aa15.53■□□□□ 0.08
AL358335.3-201ENST00000604678 RB1CC1Q8TDY2 1594 aa15.49■□□□□ 0.07
AL358335.3-201ENST00000604678 SHROOM4Q9ULL8 1493 aa15.38■□□□□ 0.05
AL358335.3-201ENST00000604678 UNC13AQ9UPW8 1703 aa15.25■□□□□ 0.03
AL358335.3-201ENST00000604678 SCRIBQ14160 1630 aa15.11■□□□□ 0.01
AL358335.3-201ENST00000604678 BICRAQ9NZM4 1560 aa15.07■□□□□ 0
AL358335.3-201ENST00000604678 PABPN1Q86U42 306 aaKnown RBP eCLIP14.85□□□□□ -0.03
AL358335.3-201ENST00000604678 SUPT5HO00267 1087 aaKnown RBP14.83□□□□□ -0.04
AL358335.3-201ENST00000604678 RSF1Q96T23 1441 aaPredicted RBP14.69□□□□□ -0.06
AL358335.3-201ENST00000604678 CECR2Q9BXF3 1484 aa14.68□□□□□ -0.06
AL358335.3-201ENST00000604678 EIF4G1Q04637 1599 aaKnown RBP14.62□□□□□ -0.07
AL358335.3-201ENST00000604678 BAZ1AQ9NRL2 1556 aaPredicted RBP14.62□□□□□ -0.07
AL358335.3-201ENST00000604678 MROH2BQ7Z745 1585 aa14.6□□□□□ -0.07
AL358335.3-201ENST00000604678 SMARCA4P51532 1647 aa14.52□□□□□ -0.08
AL358335.3-201ENST00000604678 CC2D2AQ9P2K1 1620 aa14.5□□□□□ -0.09
AL358335.3-201ENST00000604678 WIZO95785 1651 aa14.45□□□□□ -0.1
AL358335.3-201ENST00000604678 DNAJC5BQ9UF47 199 aa14.43□□□□□ -0.1
AL358335.3-201ENST00000604678 PEG3Q9GZU2 1588 aa14.41□□□□□ -0.1
AL358335.3-201ENST00000604678 TOP2AP11388 1531 aaKnown RBP14.36□□□□□ -0.11
AL358335.3-201ENST00000604678 SMARCA2P51531 1590 aa14.35□□□□□ -0.11
AL358335.3-201ENST00000604678 ATAD2BQ9ULI0 1458 aa14.33□□□□□ -0.12
AL358335.3-201ENST00000604678 HMGXB3Q12766 1538 aa14.31□□□□□ -0.12
AL358335.3-201ENST00000604678 NCAPD3P42695 1498 aa14.31□□□□□ -0.12
AL358335.3-201ENST00000604678 CHIC1Q5VXU3 224 aa14.25□□□□□ -0.13
AL358335.3-201ENST00000604678 BAZ1BQ9UIG0 1483 aaKnown RBP14.21□□□□□ -0.13
AL358335.3-201ENST00000604678 CCDC88BA6NC98 1476 aa14.19□□□□□ -0.14
AL358335.3-201ENST00000604678 TRIM41Q8WV44 630 aa13.98□□□□□ -0.17
AL358335.3-201ENST00000604678 LAMC3Q9Y6N6 1575 aa13.93□□□□□ -0.18
AL358335.3-201ENST00000604678 PRDM2Q13029 1718 aa13.9□□□□□ -0.18
AL358335.3-201ENST00000604678 NESP48681 1621 aa13.88□□□□□ -0.19
AL358335.3-201ENST00000604678 CFTRP13569 1480 aa13.87□□□□□ -0.19
AL358335.3-201ENST00000604678 ABCC8Q09428 1581 aa13.86□□□□□ -0.19
AL358335.3-201ENST00000604678 CADPSQ9ULU8 1353 aa13.85□□□□□ -0.19
AL358335.3-201ENST00000604678 WRNQ14191 1432 aaPredicted RBP eCLIP13.82□□□□□ -0.2
AL358335.3-201ENST00000604678 KIF21AQ7Z4S6 1674 aa13.8□□□□□ -0.2
AL358335.3-201ENST00000604678 PDS5BQ9NTI5 1447 aa13.75□□□□□ -0.21
AL358335.3-201ENST00000604678 SYNJ1O43426 1573 aa13.73□□□□□ -0.21
AL358335.3-201ENST00000604678 THOC2Q8NI27 1593 aaKnown RBP13.73□□□□□ -0.21
AL358335.3-201ENST00000604678 ERCC6Q03468 1493 aa13.72□□□□□ -0.21
AL358335.3-201ENST00000604678 FANCD2Q9BXW9 1451 aa13.72□□□□□ -0.21
AL358335.3-201ENST00000604678 TOP2BQ02880 1626 aa13.7□□□□□ -0.22
AL358335.3-201ENST00000604678 CEP164Q9UPV0 1460 aa13.69□□□□□ -0.22
AL358335.3-201ENST00000604678 EEA1Q15075 1411 aa13.69□□□□□ -0.22
AL358335.3-201ENST00000604678 BIVM-ERCC5R4GMW8 1640 aa13.68□□□□□ -0.22
AL358335.3-201ENST00000604678 FAM9AQ8IZU1 332 aaPredicted RBP13.67□□□□□ -0.22
AL358335.3-201ENST00000604678 LOC105371045A0A1W2PR82 267 aa13.66□□□□□ -0.22
AL358335.3-201ENST00000604678 CUX1P39880 1505 aa13.65□□□□□ -0.22
AL358335.3-201ENST00000604678 MRC2Q9UBG0 1479 aa13.64□□□□□ -0.23
AL358335.3-201ENST00000604678 WDR62O43379 1518 aa13.64□□□□□ -0.23
AL358335.3-201ENST00000604678 SOGA1O94964 1423 aa13.64□□□□□ -0.23
AL358335.3-201ENST00000604678 URB2Q14146 1524 aaKnown RBP13.59□□□□□ -0.23
AL358335.3-201ENST00000604678 CSRNP3Q8WYN3 585 aa13.58□□□□□ -0.24
AL358335.3-201ENST00000604678 CUX2O14529 1486 aa13.58□□□□□ -0.24
AL358335.3-201ENST00000604678 RUSC2Q8N2Y8 1516 aa13.57□□□□□ -0.24
AL358335.3-201ENST00000604678 DNMBPQ6XZF7 1577 aa13.57□□□□□ -0.24
AL358335.3-201ENST00000604678 TOPBP1Q92547 1522 aa13.54□□□□□ -0.24
AL358335.3-201ENST00000604678 FGD5Q6ZNL6 1462 aa13.5□□□□□ -0.25
AL358335.3-201ENST00000604678 KIF27Q86VH2 1401 aa13.48□□□□□ -0.25
AL358335.3-201ENST00000604678 KIF21BO75037 1637 aa13.46□□□□□ -0.25
AL358335.3-201ENST00000604678 GOLGA3Q08378 1498 aa13.46□□□□□ -0.25
AL358335.3-201ENST00000604678 TNIKQ9UKE5 1360 aa13.45□□□□□ -0.26
AL358335.3-201ENST00000604678 POLA1P09884 1462 aaPredicted RBP13.44□□□□□ -0.26
AL358335.3-201ENST00000604678 TARBP1Q13395 1621 aaKnown RBP13.43□□□□□ -0.26
AL358335.3-201ENST00000604678 EHMT2Q96KQ7 1210 aa13.42□□□□□ -0.26
AL358335.3-201ENST00000604678 WDR97A6NE52 1622 aa13.42□□□□□ -0.26
AL358335.3-201ENST00000604678 PRXQ9BXM0 1461 aa13.41□□□□□ -0.26
AL358335.3-201ENST00000604678 ABCA10Q8WWZ4 1543 aa13.4□□□□□ -0.26
AL358335.3-201ENST00000604678 IFT140Q96RY7 1462 aa13.39□□□□□ -0.27
AL358335.3-201ENST00000604678 ERICH3Q5RHP9 1530 aa13.39□□□□□ -0.27
AL358335.3-201ENST00000604678 RAD54L2Q9Y4B4 1467 aa13.37□□□□□ -0.27
AL358335.3-201ENST00000604678 UBTFP17480 764 aaKnown RBP13.37□□□□□ -0.27
AL358335.3-201ENST00000604678 RAPGEF2Q9Y4G8 1499 aa13.36□□□□□ -0.27
AL358335.3-201ENST00000604678 IGF1RP08069 1367 aa13.36□□□□□ -0.27
AL358335.3-201ENST00000604678 EIF4G3O43432 1585 aaKnown RBP13.33□□□□□ -0.28
AL358335.3-201ENST00000604678 CEP162Q5TB80 1403 aa13.33□□□□□ -0.28
AL358335.3-201ENST00000604678 ZNF608Q9ULD9 1512 aaPredicted RBP13.31□□□□□ -0.28
AL358335.3-201ENST00000604678 ABCA5Q8WWZ7 1642 aa13.31□□□□□ -0.28
AL358335.3-201ENST00000604678 DNAJC5Q9H3Z4 198 aa13.29□□□□□ -0.28
AL358335.3-201ENST00000604678 CARMIL1Q5VZK9 1371 aa13.29□□□□□ -0.28
AL358335.3-201ENST00000604678 PBRM1Q86U86 1689 aa13.26□□□□□ -0.29
AL358335.3-201ENST00000604678 GAPVD1Q14C86 1478 aa13.25□□□□□ -0.29
AL358335.3-201ENST00000604678 TDRD9Q8NDG6 1382 aaKnown RBP13.25□□□□□ -0.29
AL358335.3-201ENST00000604678 CUL7Q14999 1698 aa13.24□□□□□ -0.29
AL358335.3-201ENST00000604678 CLIP1P30622 1438 aa13.23□□□□□ -0.29
AL358335.3-201ENST00000604678 AQRO60306 1485 aaKnown RBP eCLIP13.23□□□□□ -0.29
AL358335.3-201ENST00000604678 GRIN2BQ13224 1484 aa13.18□□□□□ -0.3
AL358335.3-201ENST00000604678 MAGI1Q96QZ7 1491 aaPredicted RBP13.16□□□□□ -0.3
AL358335.3-201ENST00000604678 ADAMTS12P58397 1594 aa13.15□□□□□ -0.3
AL358335.3-201ENST00000604678 CHD1O14646 1710 aa13.14□□□□□ -0.31
AL358335.3-201ENST00000604678 SNAPC4Q5SXM2 1469 aa13.14□□□□□ -0.31
AL358335.3-201ENST00000604678 FHAD1B1AJZ9 1412 aa13.13□□□□□ -0.31
AL358335.3-201ENST00000604678 VPS8Q8N3P4 1428 aa13.13□□□□□ -0.31
AL358335.3-201ENST00000604678 TRIM26Q12899 539 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms