RNA–Protein interactions for RNA: ENST00000604456.1

AL049829.3-201, humanhuman

BASIC

Gene AL049829.3, Length 1,875 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL049829.3-201ENST00000604456 NISCHQ9Y2I1 1504 aa27.99■■■□□ 2.07
AL049829.3-201ENST00000604456 CCDC180Q9P1Z9 1646 aa24.72■■□□□ 1.55
AL049829.3-201ENST00000604456 ABCC9O60706 1549 aa23.91■■□□□ 1.42
AL049829.3-201ENST00000604456 ZCCHC6Q5VYS8 1495 aaKnown RBP23.4■■□□□ 1.34
AL049829.3-201ENST00000604456 DCAF8L2P0C7V8 631 aa23.24■■□□□ 1.31
AL049829.3-201ENST00000604456 NACADO15069 1562 aa23.17■■□□□ 1.3
AL049829.3-201ENST00000604456 DCAF1Q9Y4B6 1507 aa23.17■■□□□ 1.3
AL049829.3-201ENST00000604456 MYO15BQ96JP2 1530 aa23.14■■□□□ 1.29
AL049829.3-201ENST00000604456 RB1CC1Q8TDY2 1594 aa23.13■■□□□ 1.29
AL049829.3-201ENST00000604456 SCRIBQ14160 1630 aa22.62■■□□□ 1.21
AL049829.3-201ENST00000604456 UNC13AQ9UPW8 1703 aa22.59■■□□□ 1.21
AL049829.3-201ENST00000604456 BICRAQ9NZM4 1560 aa22.43■■□□□ 1.18
AL049829.3-201ENST00000604456 PABPN1Q86U42 306 aaKnown RBP eCLIP22.39■■□□□ 1.18
AL049829.3-201ENST00000604456 SHROOM4Q9ULL8 1493 aa22.32■■□□□ 1.16
AL049829.3-201ENST00000604456 EIF4G1Q04637 1599 aaKnown RBP21.81■■□□□ 1.08
AL049829.3-201ENST00000604456 CECR2Q9BXF3 1484 aa21.78■■□□□ 1.08
AL049829.3-201ENST00000604456 BAZ1AQ9NRL2 1556 aaPredicted RBP21.67■■□□□ 1.06
AL049829.3-201ENST00000604456 DNAJC5BQ9UF47 199 aa21.65■■□□□ 1.06
AL049829.3-201ENST00000604456 SMARCA4P51532 1647 aa21.65■■□□□ 1.06
AL049829.3-201ENST00000604456 CC2D2AQ9P2K1 1620 aa21.64■■□□□ 1.05
AL049829.3-201ENST00000604456 MROH2BQ7Z745 1585 aa21.59■■□□□ 1.05
AL049829.3-201ENST00000604456 ATAD2BQ9ULI0 1458 aa21.45■■□□□ 1.03
AL049829.3-201ENST00000604456 RSF1Q96T23 1441 aaPredicted RBP21.45■■□□□ 1.02
AL049829.3-201ENST00000604456 PEG3Q9GZU2 1588 aa21.44■■□□□ 1.02
AL049829.3-201ENST00000604456 SMARCA2P51531 1590 aa21.43■■□□□ 1.02
AL049829.3-201ENST00000604456 NCAPD3P42695 1498 aa21.38■■□□□ 1.01
AL049829.3-201ENST00000604456 WIZO95785 1651 aa21.36■■□□□ 1.01
AL049829.3-201ENST00000604456 HMGXB3Q12766 1538 aa21.32■■□□□ 1
AL049829.3-201ENST00000604456 BAZ1BQ9UIG0 1483 aaKnown RBP21.3■■□□□ 1
AL049829.3-201ENST00000604456 TOP2AP11388 1531 aaKnown RBP21.16■□□□□ 0.98
AL049829.3-201ENST00000604456 SUPT5HO00267 1087 aaKnown RBP21.15■□□□□ 0.98
AL049829.3-201ENST00000604456 CCDC88BA6NC98 1476 aa20.91■□□□□ 0.94
AL049829.3-201ENST00000604456 NESP48681 1621 aa20.79■□□□□ 0.92
AL049829.3-201ENST00000604456 CADPSQ9ULU8 1353 aa20.78■□□□□ 0.92
AL049829.3-201ENST00000604456 LAMC3Q9Y6N6 1575 aa20.77■□□□□ 0.92
AL049829.3-201ENST00000604456 CFTRP13569 1480 aa20.74■□□□□ 0.91
AL049829.3-201ENST00000604456 PDS5BQ9NTI5 1447 aa20.61■□□□□ 0.89
AL049829.3-201ENST00000604456 ERCC6Q03468 1493 aa20.58■□□□□ 0.88
AL049829.3-201ENST00000604456 PRDM2Q13029 1718 aa20.56■□□□□ 0.88
AL049829.3-201ENST00000604456 FANCD2Q9BXW9 1451 aa20.56■□□□□ 0.88
AL049829.3-201ENST00000604456 KIF21AQ7Z4S6 1674 aa20.53■□□□□ 0.88
AL049829.3-201ENST00000604456 CEP164Q9UPV0 1460 aa20.5■□□□□ 0.87
AL049829.3-201ENST00000604456 THOC2Q8NI27 1593 aaKnown RBP20.4■□□□□ 0.86
AL049829.3-201ENST00000604456 MRC2Q9UBG0 1479 aa20.39■□□□□ 0.85
AL049829.3-201ENST00000604456 SLC24A1O60721 1099 aa20.36■□□□□ 0.85
AL049829.3-201ENST00000604456 URB2Q14146 1524 aaKnown RBP20.33■□□□□ 0.85
AL049829.3-201ENST00000604456 WDR62O43379 1518 aa20.32■□□□□ 0.84
AL049829.3-201ENST00000604456 ABCC8Q09428 1581 aa20.26■□□□□ 0.83
AL049829.3-201ENST00000604456 DNMBPQ6XZF7 1577 aa20.26■□□□□ 0.83
AL049829.3-201ENST00000604456 TOPBP1Q92547 1522 aa20.26■□□□□ 0.83
AL049829.3-201ENST00000604456 CUX2O14529 1486 aa20.23■□□□□ 0.83
AL049829.3-201ENST00000604456 CUX1P39880 1505 aa20.23■□□□□ 0.83
AL049829.3-201ENST00000604456 WRNQ14191 1432 aaPredicted RBP eCLIP20.22■□□□□ 0.83
AL049829.3-201ENST00000604456 SYNJ1O43426 1573 aa20.16■□□□□ 0.82
AL049829.3-201ENST00000604456 TOP2BQ02880 1626 aa20.14■□□□□ 0.81
AL049829.3-201ENST00000604456 BIVM-ERCC5R4GMW8 1640 aa20.13■□□□□ 0.81
AL049829.3-201ENST00000604456 POLA1P09884 1462 aaPredicted RBP20.11■□□□□ 0.81
AL049829.3-201ENST00000604456 FGD5Q6ZNL6 1462 aa20.11■□□□□ 0.81
AL049829.3-201ENST00000604456 IFT140Q96RY7 1462 aa20.04■□□□□ 0.8
AL049829.3-201ENST00000604456 RAD54L2Q9Y4B4 1467 aa20.03■□□□□ 0.8
AL049829.3-201ENST00000604456 SOGA1O94964 1423 aa20.02■□□□□ 0.8
AL049829.3-201ENST00000604456 TARBP1Q13395 1621 aaKnown RBP20.01■□□□□ 0.79
AL049829.3-201ENST00000604456 TRIM41Q8WV44 630 aa19.94■□□□□ 0.78
AL049829.3-201ENST00000604456 ZNF608Q9ULD9 1512 aaPredicted RBP19.94■□□□□ 0.78
AL049829.3-201ENST00000604456 ABCA10Q8WWZ4 1543 aa19.93■□□□□ 0.78
AL049829.3-201ENST00000604456 WDR97A6NE52 1622 aa19.92■□□□□ 0.78
AL049829.3-201ENST00000604456 CHIC1Q5VXU3 224 aa19.92■□□□□ 0.78
AL049829.3-201ENST00000604456 EIF4G3O43432 1585 aaKnown RBP19.88■□□□□ 0.77
AL049829.3-201ENST00000604456 TDRD9Q8NDG6 1382 aaKnown RBP19.88■□□□□ 0.77
AL049829.3-201ENST00000604456 AQRO60306 1485 aaKnown RBP eCLIP19.87■□□□□ 0.77
AL049829.3-201ENST00000604456 ABCA5Q8WWZ7 1642 aa19.82■□□□□ 0.76
AL049829.3-201ENST00000604456 GAPVD1Q14C86 1478 aa19.8■□□□□ 0.76
AL049829.3-201ENST00000604456 KIF27Q86VH2 1401 aa19.76■□□□□ 0.75
AL049829.3-201ENST00000604456 GRIN2BQ13224 1484 aa19.76■□□□□ 0.75
AL049829.3-201ENST00000604456 PBRM1Q86U86 1689 aa19.73■□□□□ 0.75
AL049829.3-201ENST00000604456 RUSC2Q8N2Y8 1516 aa19.7■□□□□ 0.74
AL049829.3-201ENST00000604456 SNAPC4Q5SXM2 1469 aa19.7■□□□□ 0.74
AL049829.3-201ENST00000604456 ERICH3Q5RHP9 1530 aa19.69■□□□□ 0.74
AL049829.3-201ENST00000604456 MAGI1Q96QZ7 1491 aaPredicted RBP19.67■□□□□ 0.74
AL049829.3-201ENST00000604456 IGF1RP08069 1367 aa19.64■□□□□ 0.73
AL049829.3-201ENST00000604456 ADAMTS12P58397 1594 aa19.61■□□□□ 0.73
AL049829.3-201ENST00000604456 SYNJ2O15056 1496 aa19.59■□□□□ 0.73
AL049829.3-201ENST00000604456 EEA1Q15075 1411 aa19.59■□□□□ 0.73
AL049829.3-201ENST00000604456 FHAD1B1AJZ9 1412 aa19.59■□□□□ 0.73
AL049829.3-201ENST00000604456 CUL7Q14999 1698 aa19.57■□□□□ 0.72
AL049829.3-201ENST00000604456 FBLN2P98095 1184 aa19.56■□□□□ 0.72
AL049829.3-201ENST00000604456 FAM9AQ8IZU1 332 aaPredicted RBP19.54■□□□□ 0.72
AL049829.3-201ENST00000604456 CHMP7Q8WUX9 453 aaPredicted RBP19.54■□□□□ 0.72
AL049829.3-201ENST00000604456 CHD1O14646 1710 aa19.54■□□□□ 0.72
AL049829.3-201ENST00000604456 CARMIL1Q5VZK9 1371 aa19.53■□□□□ 0.72
AL049829.3-201ENST00000604456 CSRNP3Q8WYN3 585 aa19.52■□□□□ 0.71
AL049829.3-201ENST00000604456 GRIN2AQ12879 1464 aa19.51■□□□□ 0.71
AL049829.3-201ENST00000604456 PRXQ9BXM0 1461 aa19.47■□□□□ 0.71
AL049829.3-201ENST00000604456 RAPGEF2Q9Y4G8 1499 aa19.46■□□□□ 0.71
AL049829.3-201ENST00000604456 OSCARQ8IYS5 282 aa19.44■□□□□ 0.7
AL049829.3-201ENST00000604456 NUP160Q12769 1436 aa19.41■□□□□ 0.7
AL049829.3-201ENST00000604456 CEP170Q5SW79 1584 aa19.4■□□□□ 0.7
AL049829.3-201ENST00000604456 KIF21BO75037 1637 aa19.37■□□□□ 0.69
AL049829.3-201ENST00000604456 CLASP1Q7Z460 1538 aa19.35■□□□□ 0.69
AL049829.3-201ENST00000604456 KIAA0586Q9BVV6 1533 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms