RNA–Protein interactions for RNA: ENST00000604254.5

FOCAD-213, Transcript of focadhesin, humanhuman

TSL 5

Gene FOCAD, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-213ENST00000604254 AEBP2Q6ZN18 517 aaPredicted RBP15.29■□□□□ 0.04
FOCAD-213ENST00000604254 CHIC1Q5VXU3 224 aa14.93□□□□□ -0.02
FOCAD-213ENST00000604254 NISCHQ9Y2I1 1504 aa14.36□□□□□ -0.11
FOCAD-213ENST00000604254 PHF23Q9BUL5 403 aaPredicted RBP13.19□□□□□ -0.3
FOCAD-213ENST00000604254 CCDC180Q9P1Z9 1646 aa12.89□□□□□ -0.35
FOCAD-213ENST00000604254 SENP3Q9H4L4 574 aaPredicted RBP12.84□□□□□ -0.35
FOCAD-213ENST00000604254 ABCC9O60706 1549 aa12.68□□□□□ -0.38
FOCAD-213ENST00000604254 DNAJC5BQ9UF47 199 aa12.3□□□□□ -0.44
FOCAD-213ENST00000604254 RB1CC1Q8TDY2 1594 aa12.13□□□□□ -0.47
FOCAD-213ENST00000604254 PLPPR3Q6T4P5 718 aa12.1□□□□□ -0.47
FOCAD-213ENST00000604254 NACADO15069 1562 aa12.08□□□□□ -0.48
FOCAD-213ENST00000604254 FOXD1Q16676 465 aa11.99□□□□□ -0.49
FOCAD-213ENST00000604254 DCAF8L2P0C7V8 631 aa11.98□□□□□ -0.49
FOCAD-213ENST00000604254 ZCCHC6Q5VYS8 1495 aaKnown RBP11.96□□□□□ -0.49
FOCAD-213ENST00000604254 MYO15BQ96JP2 1530 aa11.96□□□□□ -0.5
FOCAD-213ENST00000604254 UNC13AQ9UPW8 1703 aa11.91□□□□□ -0.5
FOCAD-213ENST00000604254 DCAF1Q9Y4B6 1507 aa11.88□□□□□ -0.51
FOCAD-213ENST00000604254 SCRIBQ14160 1630 aa11.74□□□□□ -0.53
FOCAD-213ENST00000604254 BICRAQ9NZM4 1560 aa11.73□□□□□ -0.53
FOCAD-213ENST00000604254 PABPN1Q86U42 306 aaKnown RBP eCLIP11.72□□□□□ -0.53
FOCAD-213ENST00000604254 DNAJC5Q9H3Z4 198 aa11.64□□□□□ -0.55
FOCAD-213ENST00000604254 PPP6R1Q9UPN7 881 aa11.63□□□□□ -0.55
FOCAD-213ENST00000604254 SHROOM4Q9ULL8 1493 aa11.63□□□□□ -0.55
FOCAD-213ENST00000604254 ADRA2BP18089 450 aa11.62□□□□□ -0.55
FOCAD-213ENST00000604254 CC2D2AQ9P2K1 1620 aa11.53□□□□□ -0.56
FOCAD-213ENST00000604254 CECR2Q9BXF3 1484 aa11.51□□□□□ -0.57
FOCAD-213ENST00000604254 EIF4G1Q04637 1599 aaKnown RBP11.45□□□□□ -0.58
FOCAD-213ENST00000604254 PIAS4Q8N2W9 510 aaPredicted RBP11.31□□□□□ -0.6
FOCAD-213ENST00000604254 SMARCA4P51532 1647 aa11.2□□□□□ -0.62
FOCAD-213ENST00000604254 CUX2O14529 1486 aa11.19□□□□□ -0.62
FOCAD-213ENST00000604254 BAZ1AQ9NRL2 1556 aaPredicted RBP11.16□□□□□ -0.62
FOCAD-213ENST00000604254 SMARCA2P51531 1590 aa11.13□□□□□ -0.63
FOCAD-213ENST00000604254 ATAD2BQ9ULI0 1458 aa11.1□□□□□ -0.63
FOCAD-213ENST00000604254 HMGXB3Q12766 1538 aa11.09□□□□□ -0.63
FOCAD-213ENST00000604254 NCAPD3P42695 1498 aa11.09□□□□□ -0.63
FOCAD-213ENST00000604254 MROH2BQ7Z745 1585 aa11.07□□□□□ -0.64
FOCAD-213ENST00000604254 PEG3Q9GZU2 1588 aa11.07□□□□□ -0.64
FOCAD-213ENST00000604254 BAZ1BQ9UIG0 1483 aaKnown RBP11.05□□□□□ -0.64
FOCAD-213ENST00000604254 WIZO95785 1651 aa10.98□□□□□ -0.65
FOCAD-213ENST00000604254 ERCC6Q03468 1493 aa10.98□□□□□ -0.65
FOCAD-213ENST00000604254 MSH5O43196 834 aa10.93□□□□□ -0.66
FOCAD-213ENST00000604254 LAMC3Q9Y6N6 1575 aa10.89□□□□□ -0.67
FOCAD-213ENST00000604254 RSF1Q96T23 1441 aaPredicted RBP10.88□□□□□ -0.67
FOCAD-213ENST00000604254 NESP48681 1621 aa10.87□□□□□ -0.67
FOCAD-213ENST00000604254 TOP2AP11388 1531 aaKnown RBP10.85□□□□□ -0.67
FOCAD-213ENST00000604254 KIF21AQ7Z4S6 1674 aa10.83□□□□□ -0.68
FOCAD-213ENST00000604254 THOC2Q8NI27 1593 aaKnown RBP10.82□□□□□ -0.68
FOCAD-213ENST00000604254 TRIM41Q8WV44 630 aa10.81□□□□□ -0.68
FOCAD-213ENST00000604254 PDS5BQ9NTI5 1447 aa10.76□□□□□ -0.69
FOCAD-213ENST00000604254 PRDM2Q13029 1718 aa10.76□□□□□ -0.69
FOCAD-213ENST00000604254 CADPSQ9ULU8 1353 aa10.76□□□□□ -0.69
FOCAD-213ENST00000604254 PPP4R3CPQ6ZMV5 832 aa10.72□□□□□ -0.69
FOCAD-213ENST00000604254 CFTRP13569 1480 aa10.7□□□□□ -0.7
FOCAD-213ENST00000604254 CEP164Q9UPV0 1460 aa10.7□□□□□ -0.7
FOCAD-213ENST00000604254 MRC2Q9UBG0 1479 aa10.68□□□□□ -0.7
FOCAD-213ENST00000604254 CCDC88BA6NC98 1476 aa10.68□□□□□ -0.7
FOCAD-213ENST00000604254 FANCD2Q9BXW9 1451 aa10.68□□□□□ -0.7
FOCAD-213ENST00000604254 WDR62O43379 1518 aa10.67□□□□□ -0.7
FOCAD-213ENST00000604254 KCNA4P22459 653 aa10.61□□□□□ -0.71
FOCAD-213ENST00000604254 OSCARQ8IYS5 282 aa10.61□□□□□ -0.71
FOCAD-213ENST00000604254 URB2Q14146 1524 aaKnown RBP10.57□□□□□ -0.72
FOCAD-213ENST00000604254 SUPT5HO00267 1087 aaKnown RBP10.54□□□□□ -0.72
FOCAD-213ENST00000604254 MAPK8IP2Q13387 824 aaPredicted RBP10.54□□□□□ -0.72
FOCAD-213ENST00000604254 DNMBPQ6XZF7 1577 aa10.52□□□□□ -0.73
FOCAD-213ENST00000604254 TOPBP1Q92547 1522 aa10.5□□□□□ -0.73
FOCAD-213ENST00000604254 RIMBP3CA6NJZ7 1639 aa10.5□□□□□ -0.73
FOCAD-213ENST00000604254 RIMBP3BA6NNM3 1639 aa10.5□□□□□ -0.73
FOCAD-213ENST00000604254 RIMBP3Q9UFD9 1639 aa10.5□□□□□ -0.73
FOCAD-213ENST00000604254 ABCC8Q09428 1581 aa10.49□□□□□ -0.73
FOCAD-213ENST00000604254 SCAF1Q9H7N4 1312 aaKnown RBP10.46□□□□□ -0.73
FOCAD-213ENST00000604254 IFT140Q96RY7 1462 aa10.45□□□□□ -0.74
FOCAD-213ENST00000604254 EIF4G3O43432 1585 aaKnown RBP10.43□□□□□ -0.74
FOCAD-213ENST00000604254 TARBP1Q13395 1621 aaKnown RBP10.41□□□□□ -0.74
FOCAD-213ENST00000604254 POLA1P09884 1462 aaPredicted RBP10.41□□□□□ -0.74
FOCAD-213ENST00000604254 ZNF608Q9ULD9 1512 aaPredicted RBP10.4□□□□□ -0.74
FOCAD-213ENST00000604254 ARHGEF11O15085 1522 aa10.39□□□□□ -0.75
FOCAD-213ENST00000604254 CUX1P39880 1505 aa10.39□□□□□ -0.75
FOCAD-213ENST00000604254 FGD5Q6ZNL6 1462 aa10.38□□□□□ -0.75
FOCAD-213ENST00000604254 NCBP3Q53F19 620 aaKnown RBP10.37□□□□□ -0.75
FOCAD-213ENST00000604254 CNKSR2Q8WXI2 1034 aa10.36□□□□□ -0.75
FOCAD-213ENST00000604254 WDR97A6NE52 1622 aa10.36□□□□□ -0.75
FOCAD-213ENST00000604254 RAD54L2Q9Y4B4 1467 aa10.34□□□□□ -0.75
FOCAD-213ENST00000604254 SOGA1O94964 1423 aa10.33□□□□□ -0.76
FOCAD-213ENST00000604254 BIVM-ERCC5R4GMW8 1640 aa10.33□□□□□ -0.76
FOCAD-213ENST00000604254 CHD1O14646 1710 aa10.33□□□□□ -0.76
FOCAD-213ENST00000604254 NPM3O75607 178 aaKnown RBP10.33□□□□□ -0.76
FOCAD-213ENST00000604254 CYB5RLQ6IPT4 315 aa10.33□□□□□ -0.76
FOCAD-213ENST00000604254 PBRM1Q86U86 1689 aa10.31□□□□□ -0.76
FOCAD-213ENST00000604254 AQRO60306 1485 aaKnown RBP eCLIP10.31□□□□□ -0.76
FOCAD-213ENST00000604254 TOP2BQ02880 1626 aa10.31□□□□□ -0.76
FOCAD-213ENST00000604254 SYNJ1O43426 1573 aa10.31□□□□□ -0.76
FOCAD-213ENST00000604254 TRHP20396 242 aaPredicted RBP10.3□□□□□ -0.76
FOCAD-213ENST00000604254 WRNQ14191 1432 aaPredicted RBP eCLIP10.29□□□□□ -0.76
FOCAD-213ENST00000604254 DMRT2Q9Y5R5 561 aa10.28□□□□□ -0.76
FOCAD-213ENST00000604254 TDRD9Q8NDG6 1382 aaKnown RBP10.27□□□□□ -0.76
FOCAD-213ENST00000604254 ABCA5Q8WWZ7 1642 aa10.27□□□□□ -0.77
FOCAD-213ENST00000604254 SNAPC4Q5SXM2 1469 aa10.27□□□□□ -0.77
FOCAD-213ENST00000604254 ABCA10Q8WWZ4 1543 aa10.27□□□□□ -0.77
FOCAD-213ENST00000604254 GRIN2BQ13224 1484 aa10.25□□□□□ -0.77
FOCAD-213ENST00000604254 MAGI1Q96QZ7 1491 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms