RNA–Protein interactions for RNA: ENST00000602841.5

SCNM1-207, Transcript of sodium channel modifier 1, humanhuman

TSL 3

Gene SCNM1, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-207ENST00000602841 NISCHQ9Y2I1 1504 aa25.24■■□□□ 1.63
SCNM1-207ENST00000602841 ABCC9O60706 1549 aa22.93■■□□□ 1.26
SCNM1-207ENST00000602841 DNAJC5BQ9UF47 199 aa22.52■■□□□ 1.2
SCNM1-207ENST00000602841 CCDC180Q9P1Z9 1646 aa22.04■■□□□ 1.12
SCNM1-207ENST00000602841 DNAJC5Q9H3Z4 198 aa21.32■■□□□ 1
SCNM1-207ENST00000602841 RB1CC1Q8TDY2 1594 aa21.3■■□□□ 1
SCNM1-207ENST00000602841 PABPN1Q86U42 306 aaKnown RBP eCLIP21.27■■□□□ 1
SCNM1-207ENST00000602841 ZCCHC6Q5VYS8 1495 aaKnown RBP21.16■□□□□ 0.98
SCNM1-207ENST00000602841 NACADO15069 1562 aa20.94■□□□□ 0.94
SCNM1-207ENST00000602841 DCAF1Q9Y4B6 1507 aa20.91■□□□□ 0.94
SCNM1-207ENST00000602841 BICRAQ9NZM4 1560 aa20.8■□□□□ 0.92
SCNM1-207ENST00000602841 MYO15BQ96JP2 1530 aa20.77■□□□□ 0.92
SCNM1-207ENST00000602841 UNC13AQ9UPW8 1703 aa20.75■□□□□ 0.91
SCNM1-207ENST00000602841 CECR2Q9BXF3 1484 aa20.75■□□□□ 0.91
SCNM1-207ENST00000602841 DCAF8L2P0C7V8 631 aa20.74■□□□□ 0.91
SCNM1-207ENST00000602841 CC2D2AQ9P2K1 1620 aa20.61■□□□□ 0.89
SCNM1-207ENST00000602841 EIF4G1Q04637 1599 aaKnown RBP20.34■□□□□ 0.85
SCNM1-207ENST00000602841 SHROOM4Q9ULL8 1493 aa20.33■□□□□ 0.85
SCNM1-207ENST00000602841 SCRIBQ14160 1630 aa20.2■□□□□ 0.82
SCNM1-207ENST00000602841 CUX2O14529 1486 aa20.11■□□□□ 0.81
SCNM1-207ENST00000602841 TRIM41Q8WV44 630 aa19.95■□□□□ 0.78
SCNM1-207ENST00000602841 ERCC6Q03468 1493 aa19.81■□□□□ 0.76
SCNM1-207ENST00000602841 RSF1Q96T23 1441 aaPredicted RBP19.51■□□□□ 0.71
SCNM1-207ENST00000602841 MROH2BQ7Z745 1585 aa19.51■□□□□ 0.71
SCNM1-207ENST00000602841 BAZ1AQ9NRL2 1556 aaPredicted RBP19.44■□□□□ 0.7
SCNM1-207ENST00000602841 NESP48681 1621 aa19.43■□□□□ 0.7
SCNM1-207ENST00000602841 NCAPD3P42695 1498 aa19.42■□□□□ 0.7
SCNM1-207ENST00000602841 SMARCA4P51532 1647 aa19.4■□□□□ 0.7
SCNM1-207ENST00000602841 SUPT5HO00267 1087 aaKnown RBP19.37■□□□□ 0.69
SCNM1-207ENST00000602841 THOC2Q8NI27 1593 aaKnown RBP19.35■□□□□ 0.69
SCNM1-207ENST00000602841 WIZO95785 1651 aa19.27■□□□□ 0.68
SCNM1-207ENST00000602841 PEG3Q9GZU2 1588 aa19.26■□□□□ 0.67
SCNM1-207ENST00000602841 ATAD2BQ9ULI0 1458 aa19.22■□□□□ 0.67
SCNM1-207ENST00000602841 SMARCA2P51531 1590 aa19.15■□□□□ 0.66
SCNM1-207ENST00000602841 OSCARQ8IYS5 282 aa19.11■□□□□ 0.65
SCNM1-207ENST00000602841 HMGXB3Q12766 1538 aa19.1■□□□□ 0.65
SCNM1-207ENST00000602841 TOP2AP11388 1531 aaKnown RBP19.07■□□□□ 0.64
SCNM1-207ENST00000602841 LAMC3Q9Y6N6 1575 aa19.04■□□□□ 0.64
SCNM1-207ENST00000602841 KIF21AQ7Z4S6 1674 aa19.02■□□□□ 0.64
SCNM1-207ENST00000602841 PDS5BQ9NTI5 1447 aa19.02■□□□□ 0.64
SCNM1-207ENST00000602841 BAZ1BQ9UIG0 1483 aaKnown RBP18.97■□□□□ 0.63
SCNM1-207ENST00000602841 AEBP2Q6ZN18 517 aaPredicted RBP18.95■□□□□ 0.62
SCNM1-207ENST00000602841 CCDC88BA6NC98 1476 aa18.92■□□□□ 0.62
SCNM1-207ENST00000602841 MRC2Q9UBG0 1479 aa18.9■□□□□ 0.62
SCNM1-207ENST00000602841 WDR62O43379 1518 aa18.89■□□□□ 0.61
SCNM1-207ENST00000602841 RIMBP3CA6NJZ7 1639 aa18.88■□□□□ 0.61
SCNM1-207ENST00000602841 RIMBP3BA6NNM3 1639 aa18.88■□□□□ 0.61
SCNM1-207ENST00000602841 RIMBP3Q9UFD9 1639 aa18.88■□□□□ 0.61
SCNM1-207ENST00000602841 TRHP20396 242 aaPredicted RBP18.81■□□□□ 0.6
SCNM1-207ENST00000602841 CADPSQ9ULU8 1353 aa18.8■□□□□ 0.6
SCNM1-207ENST00000602841 ARHGEF11O15085 1522 aa18.75■□□□□ 0.59
SCNM1-207ENST00000602841 CYB5RLQ6IPT4 315 aa18.75■□□□□ 0.59
SCNM1-207ENST00000602841 CEP164Q9UPV0 1460 aa18.62■□□□□ 0.57
SCNM1-207ENST00000602841 CFTRP13569 1480 aa18.6■□□□□ 0.57
SCNM1-207ENST00000602841 FANCD2Q9BXW9 1451 aa18.55■□□□□ 0.56
SCNM1-207ENST00000602841 CHIC1Q5VXU3 224 aa18.55■□□□□ 0.56
SCNM1-207ENST00000602841 ARAP1Q96P48 1450 aa18.52■□□□□ 0.56
SCNM1-207ENST00000602841 URB2Q14146 1524 aaKnown RBP18.48■□□□□ 0.55
SCNM1-207ENST00000602841 ZNF608Q9ULD9 1512 aaPredicted RBP18.43■□□□□ 0.54
SCNM1-207ENST00000602841 ILDR1Q86SU0 546 aaPredicted RBP18.39■□□□□ 0.53
SCNM1-207ENST00000602841 ABCC8Q09428 1581 aa18.37■□□□□ 0.53
SCNM1-207ENST00000602841 PRDM2Q13029 1718 aa18.31■□□□□ 0.52
SCNM1-207ENST00000602841 IFT140Q96RY7 1462 aa18.31■□□□□ 0.52
SCNM1-207ENST00000602841 WRNQ14191 1432 aaPredicted RBP eCLIP18.29■□□□□ 0.52
SCNM1-207ENST00000602841 SYNJ1O43426 1573 aa18.25■□□□□ 0.51
SCNM1-207ENST00000602841 CUX1P39880 1505 aa18.23■□□□□ 0.51
SCNM1-207ENST00000602841 FBLN2P98095 1184 aa18.21■□□□□ 0.51
SCNM1-207ENST00000602841 TOP2BQ02880 1626 aa18.18■□□□□ 0.5
SCNM1-207ENST00000602841 CHD1O14646 1710 aa18.18■□□□□ 0.5
SCNM1-207ENST00000602841 EIF4G3O43432 1585 aaKnown RBP18.17■□□□□ 0.5
SCNM1-207ENST00000602841 BIVM-ERCC5R4GMW8 1640 aa18.16■□□□□ 0.5
SCNM1-207ENST00000602841 AQRO60306 1485 aaKnown RBP eCLIP18.15■□□□□ 0.5
SCNM1-207ENST00000602841 TOPBP1Q92547 1522 aa18.11■□□□□ 0.49
SCNM1-207ENST00000602841 DNMBPQ6XZF7 1577 aa18.08■□□□□ 0.49
SCNM1-207ENST00000602841 CLASP1Q7Z460 1538 aa18.03■□□□□ 0.48
SCNM1-207ENST00000602841 FGD5Q6ZNL6 1462 aa18.03■□□□□ 0.48
SCNM1-207ENST00000602841 SOGA1O94964 1423 aa18.03■□□□□ 0.48
SCNM1-207ENST00000602841 RUSC2Q8N2Y8 1516 aa18.03■□□□□ 0.48
SCNM1-207ENST00000602841 POLA1P09884 1462 aaPredicted RBP18.01■□□□□ 0.47
SCNM1-207ENST00000602841 TARBP1Q13395 1621 aaKnown RBP17.98■□□□□ 0.47
SCNM1-207ENST00000602841 RAD54L2Q9Y4B4 1467 aa17.96■□□□□ 0.47
SCNM1-207ENST00000602841 KDM4FA0A1W2PPD8 638 aa17.96■□□□□ 0.47
SCNM1-207ENST00000602841 GAPVD1Q14C86 1478 aa17.95■□□□□ 0.46
SCNM1-207ENST00000602841 CHMP7Q8WUX9 453 aaPredicted RBP17.91■□□□□ 0.46
SCNM1-207ENST00000602841 ABCA10Q8WWZ4 1543 aa17.9■□□□□ 0.46
SCNM1-207ENST00000602841 TDRD9Q8NDG6 1382 aaKnown RBP17.9■□□□□ 0.46
SCNM1-207ENST00000602841 SNAPC4Q5SXM2 1469 aa17.88■□□□□ 0.45
SCNM1-207ENST00000602841 FAM9AQ8IZU1 332 aaPredicted RBP17.88■□□□□ 0.45
SCNM1-207ENST00000602841 EEA1Q15075 1411 aa17.86■□□□□ 0.45
SCNM1-207ENST00000602841 WDR97A6NE52 1622 aa17.84■□□□□ 0.45
SCNM1-207ENST00000602841 CSRNP3Q8WYN3 585 aa17.84■□□□□ 0.45
SCNM1-207ENST00000602841 IGF1RP08069 1367 aa17.82■□□□□ 0.44
SCNM1-207ENST00000602841 KIF27Q86VH2 1401 aa17.81■□□□□ 0.44
SCNM1-207ENST00000602841 LOC105371045A0A1W2PR82 267 aa17.81■□□□□ 0.44
SCNM1-207ENST00000602841 MAGI1Q96QZ7 1491 aaPredicted RBP17.76■□□□□ 0.43
SCNM1-207ENST00000602841 ABCA5Q8WWZ7 1642 aa17.76■□□□□ 0.43
SCNM1-207ENST00000602841 PRXQ9BXM0 1461 aa17.75■□□□□ 0.43
SCNM1-207ENST00000602841 SYNJ2O15056 1496 aa17.74■□□□□ 0.43
SCNM1-207ENST00000602841 ERCC6L2Q5T890 1561 aa17.73■□□□□ 0.43
SCNM1-207ENST00000602841 KIF13AQ9H1H9 1805 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms