RNA–Protein interactions for RNA: ENST00000602230.1

BRD4-211, Transcript of bromodomain containing 4, humanhuman

TSL 3

Gene BRD4, Length 751 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-211ENST00000602230 NISCHQ9Y2I1 1504 aa31.5■■■□□ 2.63
BRD4-211ENST00000602230 CCDC180Q9P1Z9 1646 aa27.93■■■□□ 2.06
BRD4-211ENST00000602230 ABCC9O60706 1549 aa27.17■■□□□ 1.94
BRD4-211ENST00000602230 DCAF8L2P0C7V8 631 aa26.34■■□□□ 1.81
BRD4-211ENST00000602230 ZCCHC6Q5VYS8 1495 aaKnown RBP26.25■■□□□ 1.79
BRD4-211ENST00000602230 NACADO15069 1562 aa26.24■■□□□ 1.79
BRD4-211ENST00000602230 RB1CC1Q8TDY2 1594 aa26.23■■□□□ 1.79
BRD4-211ENST00000602230 MYO15BQ96JP2 1530 aa26.13■■□□□ 1.77
BRD4-211ENST00000602230 DCAF1Q9Y4B6 1507 aa26.08■■□□□ 1.77
BRD4-211ENST00000602230 UNC13AQ9UPW8 1703 aa25.6■■□□□ 1.69
BRD4-211ENST00000602230 SCRIBQ14160 1630 aa25.49■■□□□ 1.67
BRD4-211ENST00000602230 PABPN1Q86U42 306 aaKnown RBP eCLIP25.45■■□□□ 1.66
BRD4-211ENST00000602230 BICRAQ9NZM4 1560 aa25.39■■□□□ 1.65
BRD4-211ENST00000602230 SHROOM4Q9ULL8 1493 aa25.17■■□□□ 1.62
BRD4-211ENST00000602230 DNAJC5BQ9UF47 199 aa24.79■■□□□ 1.56
BRD4-211ENST00000602230 EIF4G1Q04637 1599 aaKnown RBP24.72■■□□□ 1.55
BRD4-211ENST00000602230 CC2D2AQ9P2K1 1620 aa24.59■■□□□ 1.53
BRD4-211ENST00000602230 CECR2Q9BXF3 1484 aa24.51■■□□□ 1.51
BRD4-211ENST00000602230 BAZ1AQ9NRL2 1556 aaPredicted RBP24.42■■□□□ 1.5
BRD4-211ENST00000602230 SMARCA4P51532 1647 aa24.4■■□□□ 1.5
BRD4-211ENST00000602230 MROH2BQ7Z745 1585 aa24.27■■□□□ 1.48
BRD4-211ENST00000602230 ATAD2BQ9ULI0 1458 aa24.24■■□□□ 1.47
BRD4-211ENST00000602230 SMARCA2P51531 1590 aa24.24■■□□□ 1.47
BRD4-211ENST00000602230 NCAPD3P42695 1498 aa24.21■■□□□ 1.47
BRD4-211ENST00000602230 PEG3Q9GZU2 1588 aa24.16■■□□□ 1.46
BRD4-211ENST00000602230 HMGXB3Q12766 1538 aa24.09■■□□□ 1.45
BRD4-211ENST00000602230 RSF1Q96T23 1441 aaPredicted RBP24.07■■□□□ 1.44
BRD4-211ENST00000602230 BAZ1BQ9UIG0 1483 aaKnown RBP24.06■■□□□ 1.44
BRD4-211ENST00000602230 WIZO95785 1651 aa24.02■■□□□ 1.44
BRD4-211ENST00000602230 TOP2AP11388 1531 aaKnown RBP23.78■■□□□ 1.4
BRD4-211ENST00000602230 SUPT5HO00267 1087 aaKnown RBP23.64■■□□□ 1.37
BRD4-211ENST00000602230 NESP48681 1621 aa23.55■■□□□ 1.36
BRD4-211ENST00000602230 LAMC3Q9Y6N6 1575 aa23.55■■□□□ 1.36
BRD4-211ENST00000602230 CADPSQ9ULU8 1353 aa23.53■■□□□ 1.36
BRD4-211ENST00000602230 CCDC88BA6NC98 1476 aa23.51■■□□□ 1.35
BRD4-211ENST00000602230 ERCC6Q03468 1493 aa23.44■■□□□ 1.34
BRD4-211ENST00000602230 PDS5BQ9NTI5 1447 aa23.42■■□□□ 1.34
BRD4-211ENST00000602230 CFTRP13569 1480 aa23.41■■□□□ 1.34
BRD4-211ENST00000602230 KIF21AQ7Z4S6 1674 aa23.28■■□□□ 1.32
BRD4-211ENST00000602230 FANCD2Q9BXW9 1451 aa23.24■■□□□ 1.31
BRD4-211ENST00000602230 PRDM2Q13029 1718 aa23.24■■□□□ 1.31
BRD4-211ENST00000602230 CEP164Q9UPV0 1460 aa23.2■■□□□ 1.3
BRD4-211ENST00000602230 THOC2Q8NI27 1593 aaKnown RBP23.14■■□□□ 1.3
BRD4-211ENST00000602230 MRC2Q9UBG0 1479 aa23.13■■□□□ 1.29
BRD4-211ENST00000602230 CUX2O14529 1486 aa23.11■■□□□ 1.29
BRD4-211ENST00000602230 WDR62O43379 1518 aa23.03■■□□□ 1.28
BRD4-211ENST00000602230 URB2Q14146 1524 aaKnown RBP22.98■■□□□ 1.27
BRD4-211ENST00000602230 ABCC8Q09428 1581 aa22.93■■□□□ 1.26
BRD4-211ENST00000602230 TOPBP1Q92547 1522 aa22.88■■□□□ 1.25
BRD4-211ENST00000602230 DNMBPQ6XZF7 1577 aa22.87■■□□□ 1.25
BRD4-211ENST00000602230 CUX1P39880 1505 aa22.76■■□□□ 1.23
BRD4-211ENST00000602230 WRNQ14191 1432 aaPredicted RBP eCLIP22.71■■□□□ 1.23
BRD4-211ENST00000602230 IFT140Q96RY7 1462 aa22.71■■□□□ 1.23
BRD4-211ENST00000602230 POLA1P09884 1462 aaPredicted RBP22.69■■□□□ 1.22
BRD4-211ENST00000602230 FGD5Q6ZNL6 1462 aa22.66■■□□□ 1.22
BRD4-211ENST00000602230 SOGA1O94964 1423 aa22.65■■□□□ 1.22
BRD4-211ENST00000602230 TOP2BQ02880 1626 aa22.62■■□□□ 1.21
BRD4-211ENST00000602230 DNAJC5Q9H3Z4 198 aa22.61■■□□□ 1.21
BRD4-211ENST00000602230 TARBP1Q13395 1621 aaKnown RBP22.6■■□□□ 1.21
BRD4-211ENST00000602230 BIVM-ERCC5R4GMW8 1640 aa22.6■■□□□ 1.21
BRD4-211ENST00000602230 SYNJ1O43426 1573 aa22.6■■□□□ 1.21
BRD4-211ENST00000602230 RAD54L2Q9Y4B4 1467 aa22.6■■□□□ 1.21
BRD4-211ENST00000602230 ZNF608Q9ULD9 1512 aaPredicted RBP22.57■■□□□ 1.2
BRD4-211ENST00000602230 TDRD9Q8NDG6 1382 aaKnown RBP22.49■■□□□ 1.19
BRD4-211ENST00000602230 AQRO60306 1485 aaKnown RBP eCLIP22.48■■□□□ 1.191e-11■■■■□ 24.1
BRD4-211ENST00000602230 EIF4G3O43432 1585 aaKnown RBP22.47■■□□□ 1.19
BRD4-211ENST00000602230 WDR97A6NE52 1622 aa22.46■■□□□ 1.19
BRD4-211ENST00000602230 ABCA10Q8WWZ4 1543 aa22.46■■□□□ 1.19
BRD4-211ENST00000602230 GAPVD1Q14C86 1478 aa22.37■■□□□ 1.17
BRD4-211ENST00000602230 GRIN2BQ13224 1484 aa22.34■■□□□ 1.17
BRD4-211ENST00000602230 TRIM41Q8WV44 630 aa22.34■■□□□ 1.17
BRD4-211ENST00000602230 ABCA5Q8WWZ7 1642 aa22.33■■□□□ 1.17
BRD4-211ENST00000602230 PBRM1Q86U86 1689 aa22.29■■□□□ 1.16
BRD4-211ENST00000602230 SNAPC4Q5SXM2 1469 aa22.27■■□□□ 1.16
BRD4-211ENST00000602230 MAGI1Q96QZ7 1491 aaPredicted RBP22.27■■□□□ 1.16
BRD4-211ENST00000602230 OSCARQ8IYS5 282 aa22.25■■□□□ 1.15
BRD4-211ENST00000602230 KIF27Q86VH2 1401 aa22.24■■□□□ 1.15
BRD4-211ENST00000602230 FBLN2P98095 1184 aa22.24■■□□□ 1.15
BRD4-211ENST00000602230 CHMP7Q8WUX9 453 aaPredicted RBP22.21■■□□□ 1.15
BRD4-211ENST00000602230 ERICH3Q5RHP9 1530 aa22.21■■□□□ 1.15
BRD4-211ENST00000602230 CHD1O14646 1710 aa22.17■■□□□ 1.14
BRD4-211ENST00000602230 SYNJ2O15056 1496 aa22.17■■□□□ 1.14
BRD4-211ENST00000602230 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
BRD4-211ENST00000602230 FHAD1B1AJZ9 1412 aa22.12■■□□□ 1.13
BRD4-211ENST00000602230 IGF1RP08069 1367 aa22.12■■□□□ 1.13
BRD4-211ENST00000602230 ADAMTS12P58397 1594 aa22.11■■□□□ 1.13
BRD4-211ENST00000602230 RUSC2Q8N2Y8 1516 aa22.05■■□□□ 1.12
BRD4-211ENST00000602230 GRIN2AQ12879 1464 aa22.04■■□□□ 1.12
BRD4-211ENST00000602230 CUL7Q14999 1698 aa22.04■■□□□ 1.12
BRD4-211ENST00000602230 CARMIL1Q5VZK9 1371 aa22■■□□□ 1.11
BRD4-211ENST00000602230 NUP160Q12769 1436 aa21.93■■□□□ 1.1
BRD4-211ENST00000602230 EEA1Q15075 1411 aa21.93■■□□□ 1.1
BRD4-211ENST00000602230 CLASP1Q7Z460 1538 aa21.93■■□□□ 1.1
BRD4-211ENST00000602230 CEP170Q5SW79 1584 aa21.91■■□□□ 1.1
BRD4-211ENST00000602230 CSRNP3Q8WYN3 585 aa21.9■■□□□ 1.1
BRD4-211ENST00000602230 RAPGEF2Q9Y4G8 1499 aa21.88■■□□□ 1.09
BRD4-211ENST00000602230 FAM9AQ8IZU1 332 aaPredicted RBP21.86■■□□□ 1.09
BRD4-211ENST00000602230 PRXQ9BXM0 1461 aa21.82■■□□□ 1.08
BRD4-211ENST00000602230 ARHGEF11O15085 1522 aa21.81■■□□□ 1.08
BRD4-211ENST00000602230 RIMBP3CA6NJZ7 1639 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms