RNA–Protein interactions for RNA: ENST00000601169.1

NPAS1-206, Transcript of neuronal PAS domain protein 1, humanhuman

TSL 3

Gene NPAS1, Length 612 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-206ENST00000601169 NISCHQ9Y2I1 1504 aa39.57■■■■□ 3.93
NPAS1-206ENST00000601169 CCDC180Q9P1Z9 1646 aa34.95■■■■□ 3.19
NPAS1-206ENST00000601169 ABCC9O60706 1549 aa33.83■■■■□ 3.01
NPAS1-206ENST00000601169 ZCCHC6Q5VYS8 1495 aaKnown RBP33.06■■■□□ 2.88
NPAS1-206ENST00000601169 DCAF8L2P0C7V8 631 aa32.92■■■□□ 2.86
NPAS1-206ENST00000601169 NACADO15069 1562 aa32.75■■■□□ 2.83
NPAS1-206ENST00000601169 DCAF1Q9Y4B6 1507 aa32.72■■■□□ 2.83
NPAS1-206ENST00000601169 RB1CC1Q8TDY2 1594 aa32.68■■■□□ 2.82
NPAS1-206ENST00000601169 MYO15BQ96JP2 1530 aa32.67■■■□□ 2.82
NPAS1-206ENST00000601169 UNC13AQ9UPW8 1703 aa32.03■■■□□ 2.72
NPAS1-206ENST00000601169 SCRIBQ14160 1630 aa32■■■□□ 2.71
NPAS1-206ENST00000601169 BICRAQ9NZM4 1560 aa31.73■■■□□ 2.67
NPAS1-206ENST00000601169 PABPN1Q86U42 306 aaKnown RBP eCLIP31.7■■■□□ 2.67
NPAS1-206ENST00000601169 SHROOM4Q9ULL8 1493 aa31.61■■■□□ 2.65
NPAS1-206ENST00000601169 EIF4G1Q04637 1599 aaKnown RBP30.83■■■□□ 2.53
NPAS1-206ENST00000601169 CECR2Q9BXF3 1484 aa30.82■■■□□ 2.53
NPAS1-206ENST00000601169 DNAJC5BQ9UF47 199 aa30.66■■■□□ 2.5
NPAS1-206ENST00000601169 BAZ1AQ9NRL2 1556 aaPredicted RBP30.62■■■□□ 2.49
NPAS1-206ENST00000601169 SMARCA4P51532 1647 aa30.62■■■□□ 2.49
NPAS1-206ENST00000601169 CC2D2AQ9P2K1 1620 aa30.61■■■□□ 2.49
NPAS1-206ENST00000601169 MROH2BQ7Z745 1585 aa30.54■■■□□ 2.48
NPAS1-206ENST00000601169 RSF1Q96T23 1441 aaPredicted RBP30.34■■■□□ 2.45
NPAS1-206ENST00000601169 ATAD2BQ9ULI0 1458 aa30.33■■■□□ 2.45
NPAS1-206ENST00000601169 SMARCA2P51531 1590 aa30.28■■■□□ 2.44
NPAS1-206ENST00000601169 PEG3Q9GZU2 1588 aa30.28■■■□□ 2.44
NPAS1-206ENST00000601169 WIZO95785 1651 aa30.26■■■□□ 2.43
NPAS1-206ENST00000601169 NCAPD3P42695 1498 aa30.22■■■□□ 2.43
NPAS1-206ENST00000601169 HMGXB3Q12766 1538 aa30.11■■■□□ 2.41
NPAS1-206ENST00000601169 BAZ1BQ9UIG0 1483 aaKnown RBP30.1■■■□□ 2.41
NPAS1-206ENST00000601169 SUPT5HO00267 1087 aaKnown RBP29.95■■■□□ 2.39
NPAS1-206ENST00000601169 TOP2AP11388 1531 aaKnown RBP29.91■■■□□ 2.38
NPAS1-206ENST00000601169 CCDC88BA6NC98 1476 aa29.58■■■□□ 2.33
NPAS1-206ENST00000601169 NESP48681 1621 aa29.42■■■□□ 2.3
NPAS1-206ENST00000601169 CADPSQ9ULU8 1353 aa29.38■■■□□ 2.29
NPAS1-206ENST00000601169 LAMC3Q9Y6N6 1575 aa29.35■■■□□ 2.29
NPAS1-206ENST00000601169 CFTRP13569 1480 aa29.29■■■□□ 2.28
NPAS1-206ENST00000601169 PRDM2Q13029 1718 aa29.14■■■□□ 2.25
NPAS1-206ENST00000601169 PDS5BQ9NTI5 1447 aa29.12■■■□□ 2.25
NPAS1-206ENST00000601169 KIF21AQ7Z4S6 1674 aa29.09■■■□□ 2.25
NPAS1-206ENST00000601169 ERCC6Q03468 1493 aa29.08■■■□□ 2.25
NPAS1-206ENST00000601169 FANCD2Q9BXW9 1451 aa29.05■■■□□ 2.24
NPAS1-206ENST00000601169 CEP164Q9UPV0 1460 aa28.96■■■□□ 2.23
NPAS1-206ENST00000601169 THOC2Q8NI27 1593 aaKnown RBP28.85■■■□□ 2.21
NPAS1-206ENST00000601169 MRC2Q9UBG0 1479 aa28.82■■■□□ 2.2
NPAS1-206ENST00000601169 URB2Q14146 1524 aaKnown RBP28.75■■■□□ 2.19
NPAS1-206ENST00000601169 WDR62O43379 1518 aa28.72■■■□□ 2.19
NPAS1-206ENST00000601169 ABCC8Q09428 1581 aa28.67■■■□□ 2.18
NPAS1-206ENST00000601169 TOPBP1Q92547 1522 aa28.64■■■□□ 2.18
NPAS1-206ENST00000601169 DNMBPQ6XZF7 1577 aa28.64■■■□□ 2.18
NPAS1-206ENST00000601169 CUX1P39880 1505 aa28.62■■■□□ 2.17
NPAS1-206ENST00000601169 WRNQ14191 1432 aaPredicted RBP eCLIP28.58■■■□□ 2.17
NPAS1-206ENST00000601169 CUX2O14529 1486 aa28.58■■■□□ 2.17
NPAS1-206ENST00000601169 SYNJ1O43426 1573 aa28.53■■■□□ 2.16
NPAS1-206ENST00000601169 TOP2BQ02880 1626 aa28.47■■■□□ 2.15
NPAS1-206ENST00000601169 BIVM-ERCC5R4GMW8 1640 aa28.47■■■□□ 2.15
NPAS1-206ENST00000601169 FGD5Q6ZNL6 1462 aa28.44■■■□□ 2.14
NPAS1-206ENST00000601169 POLA1P09884 1462 aaPredicted RBP28.43■■■□□ 2.14
NPAS1-206ENST00000601169 RAD54L2Q9Y4B4 1467 aa28.34■■■□□ 2.13
NPAS1-206ENST00000601169 IFT140Q96RY7 1462 aa28.33■■■□□ 2.13
NPAS1-206ENST00000601169 SOGA1O94964 1423 aa28.32■■■□□ 2.12
NPAS1-206ENST00000601169 TARBP1Q13395 1621 aaKnown RBP28.31■■■□□ 2.12
NPAS1-206ENST00000601169 TRIM41Q8WV44 630 aa28.23■■■□□ 2.11
NPAS1-206ENST00000601169 ZNF608Q9ULD9 1512 aaPredicted RBP28.22■■■□□ 2.11
NPAS1-206ENST00000601169 CHIC1Q5VXU3 224 aa28.21■■■□□ 2.11
NPAS1-206ENST00000601169 WDR97A6NE52 1622 aa28.19■■■□□ 2.1
NPAS1-206ENST00000601169 ABCA10Q8WWZ4 1543 aa28.17■■■□□ 2.1
NPAS1-206ENST00000601169 TDRD9Q8NDG6 1382 aaKnown RBP28.12■■■□□ 2.09
NPAS1-206ENST00000601169 EIF4G3O43432 1585 aaKnown RBP28.11■■■□□ 2.09
NPAS1-206ENST00000601169 AQRO60306 1485 aaKnown RBP eCLIP28.1■■■□□ 2.09
NPAS1-206ENST00000601169 ABCA5Q8WWZ7 1642 aa28.03■■■□□ 2.08
NPAS1-206ENST00000601169 GAPVD1Q14C86 1478 aa28■■■□□ 2.07
NPAS1-206ENST00000601169 PBRM1Q86U86 1689 aa27.94■■■□□ 2.06
NPAS1-206ENST00000601169 KIF27Q86VH2 1401 aa27.92■■■□□ 2.06
NPAS1-206ENST00000601169 GRIN2BQ13224 1484 aa27.91■■■□□ 2.06
NPAS1-206ENST00000601169 RUSC2Q8N2Y8 1516 aa27.9■■■□□ 2.06
NPAS1-206ENST00000601169 SNAPC4Q5SXM2 1469 aa27.85■■■□□ 2.05
NPAS1-206ENST00000601169 ERICH3Q5RHP9 1530 aa27.82■■■□□ 2.04
NPAS1-206ENST00000601169 MAGI1Q96QZ7 1491 aaPredicted RBP27.78■■■□□ 2.04
NPAS1-206ENST00000601169 IGF1RP08069 1367 aa27.78■■■□□ 2.04
NPAS1-206ENST00000601169 ADAMTS12P58397 1594 aa27.73■■■□□ 2.03
NPAS1-206ENST00000601169 FAM9AQ8IZU1 332 aaPredicted RBP27.69■■■□□ 2.02
NPAS1-206ENST00000601169 CHD1O14646 1710 aa27.69■■■□□ 2.02
NPAS1-206ENST00000601169 SYNJ2O15056 1496 aa27.68■■■□□ 2.02
NPAS1-206ENST00000601169 FHAD1B1AJZ9 1412 aa27.67■■■□□ 2.02
NPAS1-206ENST00000601169 FBLN2P98095 1184 aa27.67■■■□□ 2.02
NPAS1-206ENST00000601169 EEA1Q15075 1411 aa27.67■■■□□ 2.02
NPAS1-206ENST00000601169 CUL7Q14999 1698 aa27.66■■■□□ 2.02
NPAS1-206ENST00000601169 CHMP7Q8WUX9 453 aaPredicted RBP27.64■■■□□ 2.02
NPAS1-206ENST00000601169 CARMIL1Q5VZK9 1371 aa27.62■■■□□ 2.01
NPAS1-206ENST00000601169 CSRNP3Q8WYN3 585 aa27.62■■■□□ 2.01
NPAS1-206ENST00000601169 GRIN2AQ12879 1464 aa27.57■■■□□ 2
NPAS1-206ENST00000601169 PRXQ9BXM0 1461 aa27.53■■■□□ 2
NPAS1-206ENST00000601169 RAPGEF2Q9Y4G8 1499 aa27.51■■□□□ 1.99
NPAS1-206ENST00000601169 OSCARQ8IYS5 282 aa27.5■■□□□ 1.99
NPAS1-206ENST00000601169 CEP170Q5SW79 1584 aa27.44■■□□□ 1.98
NPAS1-206ENST00000601169 NUP160Q12769 1436 aa27.42■■□□□ 1.98
NPAS1-206ENST00000601169 KIF21BO75037 1637 aa27.39■■□□□ 1.98
NPAS1-206ENST00000601169 CLASP1Q7Z460 1538 aa27.36■■□□□ 1.97
NPAS1-206ENST00000601169 EHMT2Q96KQ7 1210 aa27.33■■□□□ 1.97
NPAS1-206ENST00000601169 KIAA0586Q9BVV6 1533 aa27.26■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms