RNA–Protein interactions for RNA: ENST00000599714.1

ZNF544-214, Transcript of zinc finger protein 544, humanhuman

TSL 2

Gene ZNF544, Length 218 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-214ENST00000599714 NISCHQ9Y2I1 1504 aa19.31■□□□□ 0.68
ZNF544-214ENST00000599714 CCDC180Q9P1Z9 1646 aa17.17■□□□□ 0.34
ZNF544-214ENST00000599714 ABCC9O60706 1549 aa16.65■□□□□ 0.26
ZNF544-214ENST00000599714 NACADO15069 1562 aa16.16■□□□□ 0.18
ZNF544-214ENST00000599714 RB1CC1Q8TDY2 1594 aa16.14■□□□□ 0.17
ZNF544-214ENST00000599714 MYO15BQ96JP2 1530 aa16.14■□□□□ 0.17
ZNF544-214ENST00000599714 DCAF8L2P0C7V8 631 aa16.09■□□□□ 0.17
ZNF544-214ENST00000599714 ZCCHC6Q5VYS8 1495 aaKnown RBP16.09■□□□□ 0.17
ZNF544-214ENST00000599714 DCAF1Q9Y4B6 1507 aa16.06■□□□□ 0.16
ZNF544-214ENST00000599714 UNC13AQ9UPW8 1703 aa15.63■□□□□ 0.09
ZNF544-214ENST00000599714 SHROOM4Q9ULL8 1493 aa15.59■□□□□ 0.09
ZNF544-214ENST00000599714 SCRIBQ14160 1630 aa15.57■□□□□ 0.08
ZNF544-214ENST00000599714 PABPN1Q86U42 306 aaKnown RBP eCLIP15.56■□□□□ 0.08
ZNF544-214ENST00000599714 BICRAQ9NZM4 1560 aa15.54■□□□□ 0.08
ZNF544-214ENST00000599714 AEBP2Q6ZN18 517 aaPredicted RBP15.2■□□□□ 0.02
ZNF544-214ENST00000599714 EIF4G1Q04637 1599 aaKnown RBP15.18■□□□□ 0.02
ZNF544-214ENST00000599714 DNAJC5BQ9UF47 199 aa15.17■□□□□ 0.02
ZNF544-214ENST00000599714 CC2D2AQ9P2K1 1620 aa15.07■□□□□ 0
ZNF544-214ENST00000599714 CECR2Q9BXF3 1484 aa15.01□□□□□ -0.01
ZNF544-214ENST00000599714 BAZ1AQ9NRL2 1556 aaPredicted RBP15□□□□□ -0.01
ZNF544-214ENST00000599714 SMARCA4P51532 1647 aa14.94□□□□□ -0.02
ZNF544-214ENST00000599714 SMARCA2P51531 1590 aa14.92□□□□□ -0.02
ZNF544-214ENST00000599714 NCAPD3P42695 1498 aa14.9□□□□□ -0.02
ZNF544-214ENST00000599714 ATAD2BQ9ULI0 1458 aa14.87□□□□□ -0.03
ZNF544-214ENST00000599714 PEG3Q9GZU2 1588 aa14.85□□□□□ -0.03
ZNF544-214ENST00000599714 HMGXB3Q12766 1538 aa14.82□□□□□ -0.04
ZNF544-214ENST00000599714 MROH2BQ7Z745 1585 aa14.82□□□□□ -0.04
ZNF544-214ENST00000599714 BAZ1BQ9UIG0 1483 aaKnown RBP14.77□□□□□ -0.04
ZNF544-214ENST00000599714 RSF1Q96T23 1441 aaPredicted RBP14.73□□□□□ -0.05
ZNF544-214ENST00000599714 WIZO95785 1651 aa14.65□□□□□ -0.06
ZNF544-214ENST00000599714 TOP2AP11388 1531 aaKnown RBP14.57□□□□□ -0.08
ZNF544-214ENST00000599714 LAMC3Q9Y6N6 1575 aa14.5□□□□□ -0.09
ZNF544-214ENST00000599714 CADPSQ9ULU8 1353 aa14.47□□□□□ -0.09
ZNF544-214ENST00000599714 PDS5BQ9NTI5 1447 aa14.44□□□□□ -0.1
ZNF544-214ENST00000599714 ERCC6Q03468 1493 aa14.43□□□□□ -0.1
ZNF544-214ENST00000599714 NESP48681 1621 aa14.39□□□□□ -0.11
ZNF544-214ENST00000599714 CFTRP13569 1480 aa14.38□□□□□ -0.11
ZNF544-214ENST00000599714 SUPT5HO00267 1087 aaKnown RBP14.38□□□□□ -0.11
ZNF544-214ENST00000599714 CCDC88BA6NC98 1476 aa14.38□□□□□ -0.11
ZNF544-214ENST00000599714 CUX2O14529 1486 aa14.28□□□□□ -0.12
ZNF544-214ENST00000599714 FANCD2Q9BXW9 1451 aa14.27□□□□□ -0.12
ZNF544-214ENST00000599714 CHIC1Q5VXU3 224 aa14.27□□□□□ -0.13
ZNF544-214ENST00000599714 CEP164Q9UPV0 1460 aa14.26□□□□□ -0.13
ZNF544-214ENST00000599714 PRDM2Q13029 1718 aa14.23□□□□□ -0.13
ZNF544-214ENST00000599714 KIF21AQ7Z4S6 1674 aa14.23□□□□□ -0.13
ZNF544-214ENST00000599714 MRC2Q9UBG0 1479 aa14.22□□□□□ -0.13
ZNF544-214ENST00000599714 THOC2Q8NI27 1593 aaKnown RBP14.19□□□□□ -0.14
ZNF544-214ENST00000599714 ABCC8Q09428 1581 aa14.16□□□□□ -0.14
ZNF544-214ENST00000599714 WDR62O43379 1518 aa14.15□□□□□ -0.14
ZNF544-214ENST00000599714 URB2Q14146 1524 aaKnown RBP14.07□□□□□ -0.16
ZNF544-214ENST00000599714 DNMBPQ6XZF7 1577 aa14.04□□□□□ -0.16
ZNF544-214ENST00000599714 TOPBP1Q92547 1522 aa14.03□□□□□ -0.16
ZNF544-214ENST00000599714 IFT140Q96RY7 1462 aa13.99□□□□□ -0.17
ZNF544-214ENST00000599714 WRNQ14191 1432 aaPredicted RBP eCLIP13.91□□□□□ -0.18
ZNF544-214ENST00000599714 CUX1P39880 1505 aa13.91□□□□□ -0.18
ZNF544-214ENST00000599714 POLA1P09884 1462 aaPredicted RBP13.91□□□□□ -0.18
ZNF544-214ENST00000599714 SOGA1O94964 1423 aa13.9□□□□□ -0.19
ZNF544-214ENST00000599714 FGD5Q6ZNL6 1462 aa13.87□□□□□ -0.19
ZNF544-214ENST00000599714 WDR97A6NE52 1622 aa13.87□□□□□ -0.19
ZNF544-214ENST00000599714 TOP2BQ02880 1626 aa13.86□□□□□ -0.19
ZNF544-214ENST00000599714 TARBP1Q13395 1621 aaKnown RBP13.85□□□□□ -0.19
ZNF544-214ENST00000599714 BIVM-ERCC5R4GMW8 1640 aa13.83□□□□□ -0.2
ZNF544-214ENST00000599714 RAD54L2Q9Y4B4 1467 aa13.8□□□□□ -0.2
ZNF544-214ENST00000599714 ABCA10Q8WWZ4 1543 aa13.8□□□□□ -0.2
ZNF544-214ENST00000599714 ZNF608Q9ULD9 1512 aaPredicted RBP13.8□□□□□ -0.2
ZNF544-214ENST00000599714 SYNJ1O43426 1573 aa13.79□□□□□ -0.2
ZNF544-214ENST00000599714 EIF4G3O43432 1585 aaKnown RBP13.77□□□□□ -0.21
ZNF544-214ENST00000599714 AQRO60306 1485 aaKnown RBP eCLIP13.76□□□□□ -0.21
ZNF544-214ENST00000599714 TDRD9Q8NDG6 1382 aaKnown RBP13.76□□□□□ -0.21
ZNF544-214ENST00000599714 DNAJC5Q9H3Z4 198 aa13.75□□□□□ -0.21
ZNF544-214ENST00000599714 GRIN2BQ13224 1484 aa13.74□□□□□ -0.21
ZNF544-214ENST00000599714 GAPVD1Q14C86 1478 aa13.73□□□□□ -0.21
ZNF544-214ENST00000599714 OSCARQ8IYS5 282 aa13.72□□□□□ -0.21
ZNF544-214ENST00000599714 MAGI1Q96QZ7 1491 aaPredicted RBP13.71□□□□□ -0.21
ZNF544-214ENST00000599714 ABCA5Q8WWZ7 1642 aa13.68□□□□□ -0.22
ZNF544-214ENST00000599714 CHMP7Q8WUX9 453 aaPredicted RBP13.66□□□□□ -0.22
ZNF544-214ENST00000599714 TRIM41Q8WV44 630 aa13.66□□□□□ -0.22
ZNF544-214ENST00000599714 KIF27Q86VH2 1401 aa13.65□□□□□ -0.22
ZNF544-214ENST00000599714 ERICH3Q5RHP9 1530 aa13.65□□□□□ -0.22
ZNF544-214ENST00000599714 SYNJ2O15056 1496 aa13.64□□□□□ -0.23
ZNF544-214ENST00000599714 SNAPC4Q5SXM2 1469 aa13.64□□□□□ -0.23
ZNF544-214ENST00000599714 FBLN2P98095 1184 aa13.63□□□□□ -0.23
ZNF544-214ENST00000599714 PBRM1Q86U86 1689 aa13.63□□□□□ -0.23
ZNF544-214ENST00000599714 FHAD1B1AJZ9 1412 aa13.6□□□□□ -0.23
ZNF544-214ENST00000599714 CHD1O14646 1710 aa13.56□□□□□ -0.24
ZNF544-214ENST00000599714 IGF1RP08069 1367 aa13.55□□□□□ -0.24
ZNF544-214ENST00000599714 ADAMTS12P58397 1594 aa13.54□□□□□ -0.24
ZNF544-214ENST00000599714 GRIN2AQ12879 1464 aa13.53□□□□□ -0.24
ZNF544-214ENST00000599714 CUL7Q14999 1698 aa13.53□□□□□ -0.24
ZNF544-214ENST00000599714 EEA1Q15075 1411 aa13.49□□□□□ -0.25
ZNF544-214ENST00000599714 CARMIL1Q5VZK9 1371 aa13.48□□□□□ -0.25
ZNF544-214ENST00000599714 NUP160Q12769 1436 aa13.47□□□□□ -0.25
ZNF544-214ENST00000599714 CLASP1Q7Z460 1538 aa13.46□□□□□ -0.25
ZNF544-214ENST00000599714 RAPGEF2Q9Y4G8 1499 aa13.42□□□□□ -0.26
ZNF544-214ENST00000599714 ARHGEF11O15085 1522 aa13.41□□□□□ -0.26
ZNF544-214ENST00000599714 CSRNP3Q8WYN3 585 aa13.41□□□□□ -0.26
ZNF544-214ENST00000599714 CEP170Q5SW79 1584 aa13.41□□□□□ -0.26
ZNF544-214ENST00000599714 RUSC2Q8N2Y8 1516 aa13.39□□□□□ -0.27
ZNF544-214ENST00000599714 KIAA0586Q9BVV6 1533 aa13.39□□□□□ -0.27
ZNF544-214ENST00000599714 JPH4Q96JJ6 628 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms