RNA–Protein interactions for RNA: ENST00000599333.1

CLEC4M-212, Transcript of C-type lectin domain family 4 member M, humanhuman

TSL 1 (best)

Gene CLEC4M, Length 1,472 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLEC4M-212ENST00000599333 NISCHQ9Y2I1 1504 aa22.92■■□□□ 1.26
CLEC4M-212ENST00000599333 CCDC180Q9P1Z9 1646 aa19.75■□□□□ 0.75
CLEC4M-212ENST00000599333 ZCCHC6Q5VYS8 1495 aaKnown RBP19.31■□□□□ 0.68
CLEC4M-212ENST00000599333 DCAF1Q9Y4B6 1507 aa18.99■□□□□ 0.63
CLEC4M-212ENST00000599333 SHROOM4Q9ULL8 1493 aa18.89■□□□□ 0.61
CLEC4M-212ENST00000599333 DCAF8L2P0C7V8 631 aa18.87■□□□□ 0.61
CLEC4M-212ENST00000599333 MYO15BQ96JP2 1530 aa18.65■□□□□ 0.58
CLEC4M-212ENST00000599333 ABCC9O60706 1549 aa18.49■□□□□ 0.55
CLEC4M-212ENST00000599333 NACADO15069 1562 aa18.41■□□□□ 0.54
CLEC4M-212ENST00000599333 SUPT5HO00267 1087 aaKnown RBP18.37■□□□□ 0.53
CLEC4M-212ENST00000599333 SCRIBQ14160 1630 aa18.21■□□□□ 0.51
CLEC4M-212ENST00000599333 RB1CC1Q8TDY2 1594 aa18.16■□□□□ 0.5
CLEC4M-212ENST00000599333 RSF1Q96T23 1441 aaPredicted RBP17.94■□□□□ 0.46
CLEC4M-212ENST00000599333 CECR2Q9BXF3 1484 aa17.79■□□□□ 0.44
CLEC4M-212ENST00000599333 CHIC1Q5VXU3 224 aa17.79■□□□□ 0.44
CLEC4M-212ENST00000599333 MROH2BQ7Z745 1585 aa17.7■□□□□ 0.42
CLEC4M-212ENST00000599333 BAZ1AQ9NRL2 1556 aaPredicted RBP17.66■□□□□ 0.42
CLEC4M-212ENST00000599333 UNC13AQ9UPW8 1703 aa17.63■□□□□ 0.41
CLEC4M-212ENST00000599333 BICRAQ9NZM4 1560 aa17.59■□□□□ 0.41
CLEC4M-212ENST00000599333 PABPN1Q86U42 306 aaKnown RBP eCLIP17.56■□□□□ 0.4
CLEC4M-212ENST00000599333 WIZO95785 1651 aa17.5■□□□□ 0.39
CLEC4M-212ENST00000599333 SMARCA4P51532 1647 aa17.5■□□□□ 0.39
CLEC4M-212ENST00000599333 TOP2AP11388 1531 aaKnown RBP17.4■□□□□ 0.38
CLEC4M-212ENST00000599333 PEG3Q9GZU2 1588 aa17.31■□□□□ 0.36
CLEC4M-212ENST00000599333 TRIM41Q8WV44 630 aa17.28■□□□□ 0.36
CLEC4M-212ENST00000599333 CCDC88BA6NC98 1476 aa17.26■□□□□ 0.35
CLEC4M-212ENST00000599333 ATAD2BQ9ULI0 1458 aa17.22■□□□□ 0.35
CLEC4M-212ENST00000599333 SMARCA2P51531 1590 aa17.22■□□□□ 0.35
CLEC4M-212ENST00000599333 EIF4G1Q04637 1599 aaKnown RBP17.17■□□□□ 0.34
CLEC4M-212ENST00000599333 BAZ1BQ9UIG0 1483 aaKnown RBP17.11■□□□□ 0.33
CLEC4M-212ENST00000599333 LOC105371045A0A1W2PR82 267 aa17.08■□□□□ 0.32
CLEC4M-212ENST00000599333 NCAPD3P42695 1498 aa17.05■□□□□ 0.32
CLEC4M-212ENST00000599333 HMGXB3Q12766 1538 aa16.98■□□□□ 0.31
CLEC4M-212ENST00000599333 FAM9AQ8IZU1 332 aaPredicted RBP16.93■□□□□ 0.3
CLEC4M-212ENST00000599333 ABCC8Q09428 1581 aa16.91■□□□□ 0.3
CLEC4M-212ENST00000599333 WRNQ14191 1432 aaPredicted RBP eCLIP16.86■□□□□ 0.29
CLEC4M-212ENST00000599333 EEA1Q15075 1411 aa16.81■□□□□ 0.28
CLEC4M-212ENST00000599333 SOGA1O94964 1423 aa16.74■□□□□ 0.27
CLEC4M-212ENST00000599333 CFTRP13569 1480 aa16.73■□□□□ 0.27
CLEC4M-212ENST00000599333 CSRNP3Q8WYN3 585 aa16.72■□□□□ 0.27
CLEC4M-212ENST00000599333 CC2D2AQ9P2K1 1620 aa16.7■□□□□ 0.26
CLEC4M-212ENST00000599333 SYNJ1O43426 1573 aa16.7■□□□□ 0.26
CLEC4M-212ENST00000599333 DNAJC5BQ9UF47 199 aa16.67■□□□□ 0.26
CLEC4M-212ENST00000599333 CADPSQ9ULU8 1353 aa16.65■□□□□ 0.26
CLEC4M-212ENST00000599333 EHMT2Q96KQ7 1210 aa16.64■□□□□ 0.25
CLEC4M-212ENST00000599333 RUSC2Q8N2Y8 1516 aa16.63■□□□□ 0.25
CLEC4M-212ENST00000599333 TOP2BQ02880 1626 aa16.62■□□□□ 0.25
CLEC4M-212ENST00000599333 TNIKQ9UKE5 1360 aa16.6■□□□□ 0.25
CLEC4M-212ENST00000599333 PCGF6Q9BYE7 350 aa16.6■□□□□ 0.25
CLEC4M-212ENST00000599333 TRIM26Q12899 539 aaPredicted RBP16.58■□□□□ 0.24
CLEC4M-212ENST00000599333 BIVM-ERCC5R4GMW8 1640 aa16.56■□□□□ 0.24
CLEC4M-212ENST00000599333 GOLGA3Q08378 1498 aa16.55■□□□□ 0.24
CLEC4M-212ENST00000599333 CUX1P39880 1505 aa16.53■□□□□ 0.24
CLEC4M-212ENST00000599333 CEP164Q9UPV0 1460 aa16.52■□□□□ 0.24
CLEC4M-212ENST00000599333 UBTFP17480 764 aaKnown RBP16.49■□□□□ 0.23
CLEC4M-212ENST00000599333 CEP162Q5TB80 1403 aa16.48■□□□□ 0.23
CLEC4M-212ENST00000599333 KIF21BO75037 1637 aa16.47■□□□□ 0.23
CLEC4M-212ENST00000599333 PRDM2Q13029 1718 aa16.44■□□□□ 0.22
CLEC4M-212ENST00000599333 KIF27Q86VH2 1401 aa16.42■□□□□ 0.22
CLEC4M-212ENST00000599333 FANCD2Q9BXW9 1451 aa16.41■□□□□ 0.22
CLEC4M-212ENST00000599333 HRCP23327 699 aa16.4■□□□□ 0.22
CLEC4M-212ENST00000599333 PRXQ9BXM0 1461 aa16.39■□□□□ 0.21
CLEC4M-212ENST00000599333 RAPGEF2Q9Y4G8 1499 aa16.36■□□□□ 0.21
CLEC4M-212ENST00000599333 ERICH3Q5RHP9 1530 aa16.35■□□□□ 0.21
CLEC4M-212ENST00000599333 LAMC3Q9Y6N6 1575 aa16.34■□□□□ 0.21
CLEC4M-212ENST00000599333 NESP48681 1621 aa16.31■□□□□ 0.2
CLEC4M-212ENST00000599333 FGD5Q6ZNL6 1462 aa16.31■□□□□ 0.2
CLEC4M-212ENST00000599333 CLIP1P30622 1438 aa16.3■□□□□ 0.2
CLEC4M-212ENST00000599333 DNMBPQ6XZF7 1577 aa16.28■□□□□ 0.2
CLEC4M-212ENST00000599333 CUX2O14529 1486 aa16.28■□□□□ 0.2
CLEC4M-212ENST00000599333 PDS5BQ9NTI5 1447 aa16.28■□□□□ 0.2
CLEC4M-212ENST00000599333 IGF1RP08069 1367 aa16.28■□□□□ 0.2
CLEC4M-212ENST00000599333 TOPBP1Q92547 1522 aa16.25■□□□□ 0.19
CLEC4M-212ENST00000599333 PPARGC1BQ86YN6 1023 aaKnown RBP16.22■□□□□ 0.19
CLEC4M-212ENST00000599333 VPS8Q8N3P4 1428 aa16.2■□□□□ 0.18
CLEC4M-212ENST00000599333 ABCA10Q8WWZ4 1543 aa16.2■□□□□ 0.18
CLEC4M-212ENST00000599333 POLA1P09884 1462 aaPredicted RBP16.19■□□□□ 0.18
CLEC4M-212ENST00000599333 CARMIL1Q5VZK9 1371 aa16.19■□□□□ 0.18
CLEC4M-212ENST00000599333 URB2Q14146 1524 aaKnown RBP16.17■□□□□ 0.18
CLEC4M-212ENST00000599333 RAD54L2Q9Y4B4 1467 aa16.15■□□□□ 0.18
CLEC4M-212ENST00000599333 ZEB1P37275 1124 aaPredicted RBP16.1■□□□□ 0.17
CLEC4M-212ENST00000599333 APLP2Q06481 763 aa16.09■□□□□ 0.17
CLEC4M-212ENST00000599333 ARAP1Q96P48 1450 aa16.08■□□□□ 0.16
CLEC4M-212ENST00000599333 RANGAP1P46060 587 aaPredicted RBP16.08■□□□□ 0.16
CLEC4M-212ENST00000599333 ARHGAP35Q9NRY4 1499 aa16.03■□□□□ 0.16
CLEC4M-212ENST00000599333 MRC2Q9UBG0 1479 aa16.02■□□□□ 0.16
CLEC4M-212ENST00000599333 KIF21AQ7Z4S6 1674 aa16■□□□□ 0.15
CLEC4M-212ENST00000599333 TDRD9Q8NDG6 1382 aaKnown RBP16■□□□□ 0.15
CLEC4M-212ENST00000599333 TTBK1Q5TCY1 1321 aaPredicted RBP16■□□□□ 0.15
CLEC4M-212ENST00000599333 GAPVD1Q14C86 1478 aa15.99■□□□□ 0.15
CLEC4M-212ENST00000599333 CUL7Q14999 1698 aa15.99■□□□□ 0.15
CLEC4M-212ENST00000599333 WDR97A6NE52 1622 aa15.99■□□□□ 0.15
CLEC4M-212ENST00000599333 ABCA5Q8WWZ7 1642 aa15.96■□□□□ 0.15
CLEC4M-212ENST00000599333 TARBP1Q13395 1621 aaKnown RBP15.94■□□□□ 0.14
CLEC4M-212ENST00000599333 IFT140Q96RY7 1462 aa15.89■□□□□ 0.13
CLEC4M-212ENST00000599333 WDR62O43379 1518 aa15.89■□□□□ 0.13
CLEC4M-212ENST00000599333 FHAD1B1AJZ9 1412 aa15.89■□□□□ 0.13
CLEC4M-212ENST00000599333 MAP3K1Q13233 1512 aa15.88■□□□□ 0.13
CLEC4M-212ENST00000599333 EFCAB5A4FU69 1503 aa15.87■□□□□ 0.13
CLEC4M-212ENST00000599333 KANK4Q5T7N3 995 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms