RNA–Protein interactions for RNA: ENST00000599305.1

CEACAM3-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

TSL 4

Gene CEACAM3, Length 588 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-206ENST00000599305 NISCHQ9Y2I1 1504 aa17.12■□□□□ 0.33
CEACAM3-206ENST00000599305 AEBP2Q6ZN18 517 aaPredicted RBP16.23■□□□□ 0.19
CEACAM3-206ENST00000599305 CHIC1Q5VXU3 224 aa15.58■□□□□ 0.08
CEACAM3-206ENST00000599305 CCDC180Q9P1Z9 1646 aa15.02□□□□□ -0.01
CEACAM3-206ENST00000599305 ABCC9O60706 1549 aa14.72□□□□□ -0.05
CEACAM3-206ENST00000599305 DCAF8L2P0C7V8 631 aa14.41□□□□□ -0.1
CEACAM3-206ENST00000599305 ZCCHC6Q5VYS8 1495 aaKnown RBP14.26□□□□□ -0.13
CEACAM3-206ENST00000599305 NACADO15069 1562 aa14.17□□□□□ -0.14
CEACAM3-206ENST00000599305 RB1CC1Q8TDY2 1594 aa14.13□□□□□ -0.15
CEACAM3-206ENST00000599305 MYO15BQ96JP2 1530 aa14.13□□□□□ -0.15
CEACAM3-206ENST00000599305 DCAF1Q9Y4B6 1507 aa14.12□□□□□ -0.15
CEACAM3-206ENST00000599305 PABPN1Q86U42 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
CEACAM3-206ENST00000599305 SENP3Q9H4L4 574 aaPredicted RBP13.87□□□□□ -0.19
CEACAM3-206ENST00000599305 SCRIBQ14160 1630 aa13.81□□□□□ -0.2
CEACAM3-206ENST00000599305 UNC13AQ9UPW8 1703 aa13.75□□□□□ -0.21
CEACAM3-206ENST00000599305 BICRAQ9NZM4 1560 aa13.73□□□□□ -0.21
CEACAM3-206ENST00000599305 SHROOM4Q9ULL8 1493 aa13.73□□□□□ -0.21
CEACAM3-206ENST00000599305 PHF23Q9BUL5 403 aaPredicted RBP13.67□□□□□ -0.22
CEACAM3-206ENST00000599305 DNAJC5BQ9UF47 199 aa13.49□□□□□ -0.25
CEACAM3-206ENST00000599305 CECR2Q9BXF3 1484 aa13.38□□□□□ -0.27
CEACAM3-206ENST00000599305 EIF4G1Q04637 1599 aaKnown RBP13.34□□□□□ -0.27
CEACAM3-206ENST00000599305 CC2D2AQ9P2K1 1620 aa13.26□□□□□ -0.29
CEACAM3-206ENST00000599305 MROH2BQ7Z745 1585 aa13.22□□□□□ -0.29
CEACAM3-206ENST00000599305 BAZ1AQ9NRL2 1556 aaPredicted RBP13.22□□□□□ -0.29
CEACAM3-206ENST00000599305 SMARCA4P51532 1647 aa13.21□□□□□ -0.3
CEACAM3-206ENST00000599305 ATAD2BQ9ULI0 1458 aa13.16□□□□□ -0.3
CEACAM3-206ENST00000599305 RSF1Q96T23 1441 aaPredicted RBP13.15□□□□□ -0.3
CEACAM3-206ENST00000599305 NCAPD3P42695 1498 aa13.13□□□□□ -0.31
CEACAM3-206ENST00000599305 SMARCA2P51531 1590 aa13.09□□□□□ -0.31
CEACAM3-206ENST00000599305 PEG3Q9GZU2 1588 aa13.06□□□□□ -0.32
CEACAM3-206ENST00000599305 WIZO95785 1651 aa13.04□□□□□ -0.32
CEACAM3-206ENST00000599305 BAZ1BQ9UIG0 1483 aaKnown RBP13.04□□□□□ -0.32
CEACAM3-206ENST00000599305 SUPT5HO00267 1087 aaKnown RBP13.03□□□□□ -0.32
CEACAM3-206ENST00000599305 HMGXB3Q12766 1538 aa12.99□□□□□ -0.33
CEACAM3-206ENST00000599305 TOP2AP11388 1531 aaKnown RBP12.89□□□□□ -0.35
CEACAM3-206ENST00000599305 FOXD1Q16676 465 aa12.88□□□□□ -0.35
CEACAM3-206ENST00000599305 CCDC88BA6NC98 1476 aa12.83□□□□□ -0.36
CEACAM3-206ENST00000599305 NESP48681 1621 aa12.79□□□□□ -0.36
CEACAM3-206ENST00000599305 CADPSQ9ULU8 1353 aa12.79□□□□□ -0.36
CEACAM3-206ENST00000599305 CFTRP13569 1480 aa12.71□□□□□ -0.38
CEACAM3-206ENST00000599305 LAMC3Q9Y6N6 1575 aa12.68□□□□□ -0.38
CEACAM3-206ENST00000599305 PDS5BQ9NTI5 1447 aa12.67□□□□□ -0.38
CEACAM3-206ENST00000599305 ERCC6Q03468 1493 aa12.65□□□□□ -0.38
CEACAM3-206ENST00000599305 FANCD2Q9BXW9 1451 aa12.6□□□□□ -0.39
CEACAM3-206ENST00000599305 CEP164Q9UPV0 1460 aa12.54□□□□□ -0.4
CEACAM3-206ENST00000599305 KIF21AQ7Z4S6 1674 aa12.51□□□□□ -0.41
CEACAM3-206ENST00000599305 PLPPR3Q6T4P5 718 aa12.51□□□□□ -0.41
CEACAM3-206ENST00000599305 MRC2Q9UBG0 1479 aa12.5□□□□□ -0.41
CEACAM3-206ENST00000599305 URB2Q14146 1524 aaKnown RBP12.47□□□□□ -0.41
CEACAM3-206ENST00000599305 THOC2Q8NI27 1593 aaKnown RBP12.45□□□□□ -0.42
CEACAM3-206ENST00000599305 PRDM2Q13029 1718 aa12.43□□□□□ -0.42
CEACAM3-206ENST00000599305 CUX2O14529 1486 aa12.42□□□□□ -0.42
CEACAM3-206ENST00000599305 WDR62O43379 1518 aa12.42□□□□□ -0.42
CEACAM3-206ENST00000599305 TOPBP1Q92547 1522 aa12.41□□□□□ -0.42
CEACAM3-206ENST00000599305 ABCC8Q09428 1581 aa12.39□□□□□ -0.43
CEACAM3-206ENST00000599305 WRNQ14191 1432 aaPredicted RBP eCLIP12.37□□□□□ -0.43
CEACAM3-206ENST00000599305 CUX1P39880 1505 aa12.37□□□□□ -0.43
CEACAM3-206ENST00000599305 DNMBPQ6XZF7 1577 aa12.36□□□□□ -0.43
CEACAM3-206ENST00000599305 SOGA1O94964 1423 aa12.32□□□□□ -0.44
CEACAM3-206ENST00000599305 POLA1P09884 1462 aaPredicted RBP12.32□□□□□ -0.44
CEACAM3-206ENST00000599305 FGD5Q6ZNL6 1462 aa12.31□□□□□ -0.44
CEACAM3-206ENST00000599305 RAD54L2Q9Y4B4 1467 aa12.31□□□□□ -0.44
CEACAM3-206ENST00000599305 IFT140Q96RY7 1462 aa12.29□□□□□ -0.44
CEACAM3-206ENST00000599305 SYNJ1O43426 1573 aa12.29□□□□□ -0.44
CEACAM3-206ENST00000599305 TRIM41Q8WV44 630 aa12.27□□□□□ -0.45
CEACAM3-206ENST00000599305 TDRD9Q8NDG6 1382 aaKnown RBP12.27□□□□□ -0.45
CEACAM3-206ENST00000599305 TOP2BQ02880 1626 aa12.26□□□□□ -0.45
CEACAM3-206ENST00000599305 MYT1Q01538 1121 aa12.26□□□□□ -0.45
CEACAM3-206ENST00000599305 ZNF608Q9ULD9 1512 aaPredicted RBP12.26□□□□□ -0.45
CEACAM3-206ENST00000599305 AQRO60306 1485 aaKnown RBP eCLIP12.24□□□□□ -0.45
CEACAM3-206ENST00000599305 TARBP1Q13395 1621 aaKnown RBP12.22□□□□□ -0.45
CEACAM3-206ENST00000599305 BIVM-ERCC5R4GMW8 1640 aa12.22□□□□□ -0.45
CEACAM3-206ENST00000599305 ABCA10Q8WWZ4 1543 aa12.19□□□□□ -0.46
CEACAM3-206ENST00000599305 PELP1Q8IZL8 1130 aaKnown RBP12.15□□□□□ -0.46
CEACAM3-206ENST00000599305 GAPVD1Q14C86 1478 aa12.14□□□□□ -0.47
CEACAM3-206ENST00000599305 EIF4G3O43432 1585 aaKnown RBP12.11□□□□□ -0.47
CEACAM3-206ENST00000599305 GRIN2BQ13224 1484 aa12.11□□□□□ -0.47
CEACAM3-206ENST00000599305 FBLN2P98095 1184 aa12.11□□□□□ -0.47
CEACAM3-206ENST00000599305 PPP6R1Q9UPN7 881 aa12.11□□□□□ -0.47
CEACAM3-206ENST00000599305 KIF27Q86VH2 1401 aa12.11□□□□□ -0.47
CEACAM3-206ENST00000599305 IGF1RP08069 1367 aa12.1□□□□□ -0.47
CEACAM3-206ENST00000599305 RUSC2Q8N2Y8 1516 aa12.09□□□□□ -0.47
CEACAM3-206ENST00000599305 WDR97A6NE52 1622 aa12.08□□□□□ -0.48
CEACAM3-206ENST00000599305 ADRA2BP18089 450 aa12.08□□□□□ -0.48
CEACAM3-206ENST00000599305 CHMP7Q8WUX9 453 aaPredicted RBP12.08□□□□□ -0.48
CEACAM3-206ENST00000599305 PIAS4Q8N2W9 510 aaPredicted RBP12.07□□□□□ -0.48
CEACAM3-206ENST00000599305 ABCA5Q8WWZ7 1642 aa12.07□□□□□ -0.48
CEACAM3-206ENST00000599305 SNAPC4Q5SXM2 1469 aa12.07□□□□□ -0.48
CEACAM3-206ENST00000599305 OSCARQ8IYS5 282 aa12.06□□□□□ -0.48
CEACAM3-206ENST00000599305 FAM9AQ8IZU1 332 aaPredicted RBP12.05□□□□□ -0.48
CEACAM3-206ENST00000599305 MSH5O43196 834 aa12.04□□□□□ -0.48
CEACAM3-206ENST00000599305 MAGI1Q96QZ7 1491 aaPredicted RBP12.03□□□□□ -0.48
CEACAM3-206ENST00000599305 CSRNP3Q8WYN3 585 aa12.02□□□□□ -0.49
CEACAM3-206ENST00000599305 TTBK1Q5TCY1 1321 aaPredicted RBP12.02□□□□□ -0.49
CEACAM3-206ENST00000599305 FHAD1B1AJZ9 1412 aa12.02□□□□□ -0.49
CEACAM3-206ENST00000599305 ERICH3Q5RHP9 1530 aa12.01□□□□□ -0.49
CEACAM3-206ENST00000599305 CARMIL1Q5VZK9 1371 aa12.01□□□□□ -0.49
CEACAM3-206ENST00000599305 SYNJ2O15056 1496 aa12□□□□□ -0.49
CEACAM3-206ENST00000599305 DNAJC5Q9H3Z4 198 aa11.99□□□□□ -0.49
CEACAM3-206ENST00000599305 PBRM1Q86U86 1689 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms