RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 NISCHQ9Y2I1 1504 aa51.33■■■■■ 5.81
LTBP4-224ENST00000599016 CCDC180Q9P1Z9 1646 aa45.32■■■■■ 4.85
LTBP4-224ENST00000599016 ABCC9O60706 1549 aa44.62■■■■■ 4.73
LTBP4-224ENST00000599016 ZCCHC6Q5VYS8 1495 aaKnown RBP42.94■■■■■ 4.46
LTBP4-224ENST00000599016 DNAJC5BQ9UF47 199 aa42.79■■■■■ 4.44
LTBP4-224ENST00000599016 DCAF8L2P0C7V8 631 aa42.6■■■■■ 4.41
LTBP4-224ENST00000599016 DCAF1Q9Y4B6 1507 aa42.52■■■■■ 4.4
LTBP4-224ENST00000599016 MYO15BQ96JP2 1530 aa42.37■■■■■ 4.37
LTBP4-224ENST00000599016 NACADO15069 1562 aa42.37■■■■■ 4.37
LTBP4-224ENST00000599016 RB1CC1Q8TDY2 1594 aa42.23■■■■■ 4.35
LTBP4-224ENST00000599016 PABPN1Q86U42 306 aaKnown RBP eCLIP41.57■■■■■ 4.25
LTBP4-224ENST00000599016 SCRIBQ14160 1630 aa41.4■■■■■ 4.22
LTBP4-224ENST00000599016 UNC13AQ9UPW8 1703 aa41.3■■■■■ 4.2
LTBP4-224ENST00000599016 SHROOM4Q9ULL8 1493 aa41.1■■■■■ 4.17
LTBP4-224ENST00000599016 BICRAQ9NZM4 1560 aa40.87■■■■■ 4.13
LTBP4-224ENST00000599016 CECR2Q9BXF3 1484 aa40.21■■■■■ 4.03
LTBP4-224ENST00000599016 CC2D2AQ9P2K1 1620 aa40.16■■■■■ 4.02
LTBP4-224ENST00000599016 EIF4G1Q04637 1599 aaKnown RBP39.86■■■■□ 3.97
LTBP4-224ENST00000599016 BAZ1AQ9NRL2 1556 aaPredicted RBP39.76■■■■□ 3.96
LTBP4-224ENST00000599016 SMARCA4P51532 1647 aa39.68■■■■□ 3.94
LTBP4-224ENST00000599016 DNAJC5Q9H3Z4 198 aa39.65■■■■□ 3.94
LTBP4-224ENST00000599016 MROH2BQ7Z745 1585 aa39.57■■■■□ 3.92
LTBP4-224ENST00000599016 RSF1Q96T23 1441 aaPredicted RBP39.42■■■■□ 3.9
LTBP4-224ENST00000599016 SMARCA2P51531 1590 aa39.25■■■■□ 3.87
LTBP4-224ENST00000599016 PEG3Q9GZU2 1588 aa39.24■■■■□ 3.87
LTBP4-224ENST00000599016 WIZO95785 1651 aa39.22■■■■□ 3.87
LTBP4-224ENST00000599016 ATAD2BQ9ULI0 1458 aa39.2■■■■□ 3.87
LTBP4-224ENST00000599016 SUPT5HO00267 1087 aaKnown RBP39.14■■■■□ 3.86
LTBP4-224ENST00000599016 NCAPD3P42695 1498 aa39.05■■■■□ 3.84
LTBP4-224ENST00000599016 HMGXB3Q12766 1538 aa38.97■■■■□ 3.83
LTBP4-224ENST00000599016 BAZ1BQ9UIG0 1483 aaKnown RBP38.97■■■■□ 3.83
LTBP4-224ENST00000599016 TOP2AP11388 1531 aaKnown RBP38.86■■■■□ 3.81
LTBP4-224ENST00000599016 CUX2O14529 1486 aa38.57■■■■□ 3.76
LTBP4-224ENST00000599016 ERCC6Q03468 1493 aa38.45■■■■□ 3.75
LTBP4-224ENST00000599016 CCDC88BA6NC98 1476 aa38.37■■■■□ 3.73
LTBP4-224ENST00000599016 NESP48681 1621 aa38.16■■■■□ 3.7
LTBP4-224ENST00000599016 CADPSQ9ULU8 1353 aa37.97■■■■□ 3.67
LTBP4-224ENST00000599016 LAMC3Q9Y6N6 1575 aa37.93■■■■□ 3.66
LTBP4-224ENST00000599016 CFTRP13569 1480 aa37.91■■■■□ 3.66
LTBP4-224ENST00000599016 PRDM2Q13029 1718 aa37.82■■■■□ 3.65
LTBP4-224ENST00000599016 THOC2Q8NI27 1593 aaKnown RBP37.74■■■■□ 3.63
LTBP4-224ENST00000599016 TRIM41Q8WV44 630 aa37.66■■■■□ 3.62
LTBP4-224ENST00000599016 PDS5BQ9NTI5 1447 aa37.64■■■■□ 3.62
LTBP4-224ENST00000599016 FANCD2Q9BXW9 1451 aa37.54■■■■□ 3.6
LTBP4-224ENST00000599016 KIF21AQ7Z4S6 1674 aa37.49■■■■□ 3.59
LTBP4-224ENST00000599016 CEP164Q9UPV0 1460 aa37.44■■■■□ 3.58
LTBP4-224ENST00000599016 ABCC8Q09428 1581 aa37.25■■■■□ 3.55
LTBP4-224ENST00000599016 MRC2Q9UBG0 1479 aa37.19■■■■□ 3.54
LTBP4-224ENST00000599016 WRNQ14191 1432 aaPredicted RBP eCLIP37.19■■■■□ 3.54
LTBP4-224ENST00000599016 DNMBPQ6XZF7 1577 aa37.1■■■■□ 3.53
LTBP4-224ENST00000599016 URB2Q14146 1524 aaKnown RBP37.09■■■■□ 3.53
LTBP4-224ENST00000599016 CUX1P39880 1505 aa37.07■■■■□ 3.53
LTBP4-224ENST00000599016 WDR62O43379 1518 aa37.04■■■■□ 3.52
LTBP4-224ENST00000599016 TOPBP1Q92547 1522 aa37.04■■■■□ 3.52
LTBP4-224ENST00000599016 SYNJ1O43426 1573 aa37.04■■■■□ 3.52
LTBP4-224ENST00000599016 TOP2BQ02880 1626 aa37.03■■■■□ 3.52
LTBP4-224ENST00000599016 BIVM-ERCC5R4GMW8 1640 aa37.03■■■■□ 3.52
LTBP4-224ENST00000599016 CHIC1Q5VXU3 224 aa37.02■■■■□ 3.52
LTBP4-224ENST00000599016 OSCARQ8IYS5 282 aa36.83■■■■□ 3.49
LTBP4-224ENST00000599016 FGD5Q6ZNL6 1462 aa36.82■■■■□ 3.49
LTBP4-224ENST00000599016 POLA1P09884 1462 aaPredicted RBP36.77■■■■□ 3.48
LTBP4-224ENST00000599016 SOGA1O94964 1423 aa36.67■■■■□ 3.46
LTBP4-224ENST00000599016 IFT140Q96RY7 1462 aa36.61■■■■□ 3.45
LTBP4-224ENST00000599016 RAD54L2Q9Y4B4 1467 aa36.6■■■■□ 3.45
LTBP4-224ENST00000599016 TARBP1Q13395 1621 aaKnown RBP36.57■■■■□ 3.44
LTBP4-224ENST00000599016 ABCA10Q8WWZ4 1543 aa36.51■■■■□ 3.44
LTBP4-224ENST00000599016 WDR97A6NE52 1622 aa36.51■■■■□ 3.43
LTBP4-224ENST00000599016 RIMBP3CA6NJZ7 1639 aa36.37■■■■□ 3.41
LTBP4-224ENST00000599016 RIMBP3BA6NNM3 1639 aa36.37■■■■□ 3.41
LTBP4-224ENST00000599016 RIMBP3Q9UFD9 1639 aa36.37■■■■□ 3.41
LTBP4-224ENST00000599016 KIF27Q86VH2 1401 aa36.35■■■■□ 3.41
LTBP4-224ENST00000599016 TDRD9Q8NDG6 1382 aaKnown RBP36.32■■■■□ 3.4
LTBP4-224ENST00000599016 ZNF608Q9ULD9 1512 aaPredicted RBP36.32■■■■□ 3.4
LTBP4-224ENST00000599016 ABCA5Q8WWZ7 1642 aa36.3■■■■□ 3.4
LTBP4-224ENST00000599016 EIF4G3O43432 1585 aaKnown RBP36.27■■■■□ 3.4
LTBP4-224ENST00000599016 EEA1Q15075 1411 aa36.26■■■■□ 3.4
LTBP4-224ENST00000599016 GAPVD1Q14C86 1478 aa36.26■■■■□ 3.4
LTBP4-224ENST00000599016 AQRO60306 1485 aaKnown RBP eCLIP36.25■■■■□ 3.394e-9■■■■■ 42.8
LTBP4-224ENST00000599016 RUSC2Q8N2Y8 1516 aa36.24■■■■□ 3.39
LTBP4-224ENST00000599016 ARHGEF11O15085 1522 aa36.2■■■■□ 3.39
LTBP4-224ENST00000599016 PBRM1Q86U86 1689 aa36.18■■■■□ 3.38
LTBP4-224ENST00000599016 FAM9AQ8IZU1 332 aaPredicted RBP36.15■■■■□ 3.38
LTBP4-224ENST00000599016 GRIN2BQ13224 1484 aa36.14■■■■□ 3.38
LTBP4-224ENST00000599016 CYB5RLQ6IPT4 315 aa36.13■■■■□ 3.37
LTBP4-224ENST00000599016 ERICH3Q5RHP9 1530 aa36.11■■■■□ 3.37
LTBP4-224ENST00000599016 CSRNP3Q8WYN3 585 aa36.06■■■■□ 3.36
LTBP4-224ENST00000599016 IGF1RP08069 1367 aa36.04■■■■□ 3.36
LTBP4-224ENST00000599016 CUL7Q14999 1698 aa36■■■■□ 3.35
LTBP4-224ENST00000599016 SNAPC4Q5SXM2 1469 aa35.95■■■■□ 3.35
LTBP4-224ENST00000599016 MAGI1Q96QZ7 1491 aaPredicted RBP35.95■■■■□ 3.35
LTBP4-224ENST00000599016 TRHP20396 242 aaPredicted RBP35.92■■■■□ 3.34
LTBP4-224ENST00000599016 CARMIL1Q5VZK9 1371 aa35.89■■■■□ 3.34
LTBP4-224ENST00000599016 ADAMTS12P58397 1594 aa35.89■■■■□ 3.34
LTBP4-224ENST00000599016 FHAD1B1AJZ9 1412 aa35.87■■■■□ 3.33
LTBP4-224ENST00000599016 ARAP1Q96P48 1450 aa35.85■■■■□ 3.33
LTBP4-224ENST00000599016 PRXQ9BXM0 1461 aa35.83■■■■□ 3.33
LTBP4-224ENST00000599016 KIF21BO75037 1637 aa35.81■■■■□ 3.32
LTBP4-224ENST00000599016 FBLN2P98095 1184 aa35.79■■■■□ 3.32
LTBP4-224ENST00000599016 SYNJ2O15056 1496 aa35.79■■■■□ 3.32
LTBP4-224ENST00000599016 RAPGEF2Q9Y4G8 1499 aa35.79■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms