RNA–Protein interactions for RNA: ENST00000597586.5

SMG9-205, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 697 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-205ENST00000597586 NISCHQ9Y2I1 1504 aa37.22■■■■□ 3.55
SMG9-205ENST00000597586 CCDC180Q9P1Z9 1646 aa32.95■■■□□ 2.86
SMG9-205ENST00000597586 ABCC9O60706 1549 aa31.88■■■□□ 2.69
SMG9-205ENST00000597586 ZCCHC6Q5VYS8 1495 aaKnown RBP31.11■■■□□ 2.57
SMG9-205ENST00000597586 NACADO15069 1562 aa30.88■■■□□ 2.53
SMG9-205ENST00000597586 DCAF8L2P0C7V8 631 aa30.88■■■□□ 2.53
SMG9-205ENST00000597586 RB1CC1Q8TDY2 1594 aa30.83■■■□□ 2.53
SMG9-205ENST00000597586 MYO15BQ96JP2 1530 aa30.83■■■□□ 2.53
SMG9-205ENST00000597586 DCAF1Q9Y4B6 1507 aa30.83■■■□□ 2.53
SMG9-205ENST00000597586 UNC13AQ9UPW8 1703 aa30.12■■■□□ 2.41
SMG9-205ENST00000597586 SCRIBQ14160 1630 aa30.08■■■□□ 2.41
SMG9-205ENST00000597586 BICRAQ9NZM4 1560 aa29.9■■■□□ 2.38
SMG9-205ENST00000597586 PABPN1Q86U42 306 aaKnown RBP eCLIP29.83■■■□□ 2.37
SMG9-205ENST00000597586 SHROOM4Q9ULL8 1493 aa29.63■■■□□ 2.33
SMG9-205ENST00000597586 EIF4G1Q04637 1599 aaKnown RBP29.08■■■□□ 2.25
SMG9-205ENST00000597586 DNAJC5BQ9UF47 199 aa28.99■■■□□ 2.23
SMG9-205ENST00000597586 CECR2Q9BXF3 1484 aa28.95■■■□□ 2.22
SMG9-205ENST00000597586 CC2D2AQ9P2K1 1620 aa28.86■■■□□ 2.21
SMG9-205ENST00000597586 BAZ1AQ9NRL2 1556 aaPredicted RBP28.84■■■□□ 2.21
SMG9-205ENST00000597586 SMARCA4P51532 1647 aa28.81■■■□□ 2.2
SMG9-205ENST00000597586 MROH2BQ7Z745 1585 aa28.7■■■□□ 2.18
SMG9-205ENST00000597586 ATAD2BQ9ULI0 1458 aa28.57■■■□□ 2.16
SMG9-205ENST00000597586 SMARCA2P51531 1590 aa28.54■■■□□ 2.16
SMG9-205ENST00000597586 PEG3Q9GZU2 1588 aa28.54■■■□□ 2.16
SMG9-205ENST00000597586 NCAPD3P42695 1498 aa28.49■■■□□ 2.15
SMG9-205ENST00000597586 RSF1Q96T23 1441 aaPredicted RBP28.49■■■□□ 2.15
SMG9-205ENST00000597586 HMGXB3Q12766 1538 aa28.41■■■□□ 2.14
SMG9-205ENST00000597586 WIZO95785 1651 aa28.39■■■□□ 2.14
SMG9-205ENST00000597586 BAZ1BQ9UIG0 1483 aaKnown RBP28.35■■■□□ 2.13
SMG9-205ENST00000597586 TOP2AP11388 1531 aaKnown RBP28.14■■■□□ 2.1
SMG9-205ENST00000597586 SUPT5HO00267 1087 aaKnown RBP27.98■■■□□ 2.07
SMG9-205ENST00000597586 CCDC88BA6NC98 1476 aa27.79■■■□□ 2.04
SMG9-205ENST00000597586 LAMC3Q9Y6N6 1575 aa27.69■■■□□ 2.02
SMG9-205ENST00000597586 NESP48681 1621 aa27.69■■■□□ 2.02
SMG9-205ENST00000597586 CADPSQ9ULU8 1353 aa27.68■■■□□ 2.02
SMG9-205ENST00000597586 CFTRP13569 1480 aa27.59■■■□□ 2.01
SMG9-205ENST00000597586 PDS5BQ9NTI5 1447 aa27.48■■□□□ 1.99
SMG9-205ENST00000597586 ERCC6Q03468 1493 aa27.44■■□□□ 1.98
SMG9-205ENST00000597586 PRDM2Q13029 1718 aa27.41■■□□□ 1.98
SMG9-205ENST00000597586 KIF21AQ7Z4S6 1674 aa27.38■■□□□ 1.97
SMG9-205ENST00000597586 FANCD2Q9BXW9 1451 aa27.37■■□□□ 1.97
SMG9-205ENST00000597586 CEP164Q9UPV0 1460 aa27.3■■□□□ 1.96
SMG9-205ENST00000597586 THOC2Q8NI27 1593 aaKnown RBP27.22■■□□□ 1.95
SMG9-205ENST00000597586 MRC2Q9UBG0 1479 aa27.19■■□□□ 1.94
SMG9-205ENST00000597586 WDR62O43379 1518 aa27.1■■□□□ 1.93
SMG9-205ENST00000597586 URB2Q14146 1524 aaKnown RBP27.07■■□□□ 1.92
SMG9-205ENST00000597586 CUX2O14529 1486 aa27.05■■□□□ 1.92
SMG9-205ENST00000597586 ABCC8Q09428 1581 aa26.98■■□□□ 1.91
SMG9-205ENST00000597586 DNMBPQ6XZF7 1577 aa26.98■■□□□ 1.91
SMG9-205ENST00000597586 TOPBP1Q92547 1522 aa26.97■■□□□ 1.91
SMG9-205ENST00000597586 CUX1P39880 1505 aa26.9■■□□□ 1.9
SMG9-205ENST00000597586 WRNQ14191 1432 aaPredicted RBP eCLIP26.85■■□□□ 1.89
SMG9-205ENST00000597586 SYNJ1O43426 1573 aa26.78■■□□□ 1.88
SMG9-205ENST00000597586 POLA1P09884 1462 aaPredicted RBP26.77■■□□□ 1.88
SMG9-205ENST00000597586 TOP2BQ02880 1626 aa26.76■■□□□ 1.87
SMG9-205ENST00000597586 BIVM-ERCC5R4GMW8 1640 aa26.76■■□□□ 1.87
SMG9-205ENST00000597586 FGD5Q6ZNL6 1462 aa26.75■■□□□ 1.87
SMG9-205ENST00000597586 IFT140Q96RY7 1462 aa26.71■■□□□ 1.87
SMG9-205ENST00000597586 TARBP1Q13395 1621 aaKnown RBP26.65■■□□□ 1.86
SMG9-205ENST00000597586 SOGA1O94964 1423 aa26.65■■□□□ 1.86
SMG9-205ENST00000597586 RAD54L2Q9Y4B4 1467 aa26.64■■□□□ 1.86
SMG9-205ENST00000597586 ZNF608Q9ULD9 1512 aaPredicted RBP26.55■■□□□ 1.84
SMG9-205ENST00000597586 WDR97A6NE52 1622 aa26.53■■□□□ 1.84
SMG9-205ENST00000597586 ABCA10Q8WWZ4 1543 aa26.52■■□□□ 1.84
SMG9-205ENST00000597586 EIF4G3O43432 1585 aaKnown RBP26.49■■□□□ 1.83
SMG9-205ENST00000597586 TDRD9Q8NDG6 1382 aaKnown RBP26.45■■□□□ 1.82
SMG9-205ENST00000597586 AQRO60306 1485 aaKnown RBP eCLIP26.44■■□□□ 1.82
SMG9-205ENST00000597586 TRIM41Q8WV44 630 aa26.43■■□□□ 1.82
SMG9-205ENST00000597586 ABCA5Q8WWZ7 1642 aa26.39■■□□□ 1.81
SMG9-205ENST00000597586 CHIC1Q5VXU3 224 aa26.35■■□□□ 1.81
SMG9-205ENST00000597586 GAPVD1Q14C86 1478 aa26.35■■□□□ 1.81
SMG9-205ENST00000597586 GRIN2BQ13224 1484 aa26.3■■□□□ 1.8
SMG9-205ENST00000597586 PBRM1Q86U86 1689 aa26.28■■□□□ 1.8
SMG9-205ENST00000597586 KIF27Q86VH2 1401 aa26.26■■□□□ 1.79
SMG9-205ENST00000597586 SNAPC4Q5SXM2 1469 aa26.23■■□□□ 1.79
SMG9-205ENST00000597586 ERICH3Q5RHP9 1530 aa26.21■■□□□ 1.79
SMG9-205ENST00000597586 MAGI1Q96QZ7 1491 aaPredicted RBP26.2■■□□□ 1.78
SMG9-205ENST00000597586 RUSC2Q8N2Y8 1516 aa26.13■■□□□ 1.77
SMG9-205ENST00000597586 ADAMTS12P58397 1594 aa26.12■■□□□ 1.77
SMG9-205ENST00000597586 IGF1RP08069 1367 aa26.1■■□□□ 1.77
SMG9-205ENST00000597586 SYNJ2O15056 1496 aa26.1■■□□□ 1.77
SMG9-205ENST00000597586 FHAD1B1AJZ9 1412 aa26.06■■□□□ 1.76
SMG9-205ENST00000597586 CHD1O14646 1710 aa26.05■■□□□ 1.76
SMG9-205ENST00000597586 CUL7Q14999 1698 aa26.03■■□□□ 1.76
SMG9-205ENST00000597586 FBLN2P98095 1184 aa26.02■■□□□ 1.76
SMG9-205ENST00000597586 CHMP7Q8WUX9 453 aaPredicted RBP26.02■■□□□ 1.76
SMG9-205ENST00000597586 EEA1Q15075 1411 aa26.01■■□□□ 1.75
SMG9-205ENST00000597586 OSCARQ8IYS5 282 aa26■■□□□ 1.75
SMG9-205ENST00000597586 GRIN2AQ12879 1464 aa25.98■■□□□ 1.75
SMG9-205ENST00000597586 CARMIL1Q5VZK9 1371 aa25.96■■□□□ 1.75
SMG9-205ENST00000597586 DNAJC5Q9H3Z4 198 aa25.95■■□□□ 1.74
SMG9-205ENST00000597586 CSRNP3Q8WYN3 585 aa25.88■■□□□ 1.73
SMG9-205ENST00000597586 PRXQ9BXM0 1461 aa25.86■■□□□ 1.73
SMG9-205ENST00000597586 FAM9AQ8IZU1 332 aaPredicted RBP25.86■■□□□ 1.73
SMG9-205ENST00000597586 RAPGEF2Q9Y4G8 1499 aa25.85■■□□□ 1.73
SMG9-205ENST00000597586 NUP160Q12769 1436 aa25.85■■□□□ 1.73
SMG9-205ENST00000597586 CEP170Q5SW79 1584 aa25.83■■□□□ 1.73
SMG9-205ENST00000597586 CLASP1Q7Z460 1538 aa25.82■■□□□ 1.72
SMG9-205ENST00000597586 KIF21BO75037 1637 aa25.72■■□□□ 1.71
SMG9-205ENST00000597586 KIAA0586Q9BVV6 1533 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms