RNA–Protein interactions for RNA: ENST00000597403.5

FKRP-215, Transcript of fukutin related protein, humanhuman

TSL 3

Gene FKRP, Length 322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-215ENST00000597403 NISCHQ9Y2I1 1504 aa17.61■□□□□ 0.41
FKRP-215ENST00000597403 CCDC180Q9P1Z9 1646 aa15.37■□□□□ 0.05
FKRP-215ENST00000597403 ABCC9O60706 1549 aa15.12■□□□□ 0.01
FKRP-215ENST00000597403 DCAF8L2P0C7V8 631 aa14.91□□□□□ -0.02
FKRP-215ENST00000597403 ZCCHC6Q5VYS8 1495 aaKnown RBP14.66□□□□□ -0.06
FKRP-215ENST00000597403 NACADO15069 1562 aa14.51□□□□□ -0.09
FKRP-215ENST00000597403 RB1CC1Q8TDY2 1594 aa14.47□□□□□ -0.09
FKRP-215ENST00000597403 DCAF1Q9Y4B6 1507 aa14.46□□□□□ -0.09
FKRP-215ENST00000597403 MYO15BQ96JP2 1530 aa14.43□□□□□ -0.1
FKRP-215ENST00000597403 PABPN1Q86U42 306 aaKnown RBP eCLIP14.3□□□□□ -0.12
FKRP-215ENST00000597403 SHROOM4Q9ULL8 1493 aa14.25□□□□□ -0.13
FKRP-215ENST00000597403 SCRIBQ14160 1630 aa14.21□□□□□ -0.13
FKRP-215ENST00000597403 BICRAQ9NZM4 1560 aa14.08□□□□□ -0.16
FKRP-215ENST00000597403 UNC13AQ9UPW8 1703 aa14.07□□□□□ -0.16
FKRP-215ENST00000597403 DNAJC5BQ9UF47 199 aa13.86□□□□□ -0.19
FKRP-215ENST00000597403 CECR2Q9BXF3 1484 aa13.8□□□□□ -0.2
FKRP-215ENST00000597403 EIF4G1Q04637 1599 aaKnown RBP13.68□□□□□ -0.22
FKRP-215ENST00000597403 MROH2BQ7Z745 1585 aa13.62□□□□□ -0.23
FKRP-215ENST00000597403 CC2D2AQ9P2K1 1620 aa13.59□□□□□ -0.23
FKRP-215ENST00000597403 BAZ1AQ9NRL2 1556 aaPredicted RBP13.57□□□□□ -0.24
FKRP-215ENST00000597403 RSF1Q96T23 1441 aaPredicted RBP13.56□□□□□ -0.24
FKRP-215ENST00000597403 SMARCA4P51532 1647 aa13.56□□□□□ -0.24
FKRP-215ENST00000597403 SUPT5HO00267 1087 aaKnown RBP13.55□□□□□ -0.24
FKRP-215ENST00000597403 ATAD2BQ9ULI0 1458 aa13.52□□□□□ -0.25
FKRP-215ENST00000597403 NCAPD3P42695 1498 aa13.47□□□□□ -0.25
FKRP-215ENST00000597403 WIZO95785 1651 aa13.44□□□□□ -0.26
FKRP-215ENST00000597403 SMARCA2P51531 1590 aa13.41□□□□□ -0.26
FKRP-215ENST00000597403 BAZ1BQ9UIG0 1483 aaKnown RBP13.39□□□□□ -0.27
FKRP-215ENST00000597403 PEG3Q9GZU2 1588 aa13.37□□□□□ -0.27
FKRP-215ENST00000597403 HMGXB3Q12766 1538 aa13.3□□□□□ -0.28
FKRP-215ENST00000597403 TOP2AP11388 1531 aaKnown RBP13.26□□□□□ -0.29
FKRP-215ENST00000597403 CCDC88BA6NC98 1476 aa13.22□□□□□ -0.29
FKRP-215ENST00000597403 NESP48681 1621 aa13.15□□□□□ -0.3
FKRP-215ENST00000597403 CADPSQ9ULU8 1353 aa13.13□□□□□ -0.31
FKRP-215ENST00000597403 CFTRP13569 1480 aa13.04□□□□□ -0.32
FKRP-215ENST00000597403 LAMC3Q9Y6N6 1575 aa12.98□□□□□ -0.33
FKRP-215ENST00000597403 PDS5BQ9NTI5 1447 aa12.98□□□□□ -0.33
FKRP-215ENST00000597403 ERCC6Q03468 1493 aa12.97□□□□□ -0.33
FKRP-215ENST00000597403 FANCD2Q9BXW9 1451 aa12.95□□□□□ -0.34
FKRP-215ENST00000597403 CEP164Q9UPV0 1460 aa12.87□□□□□ -0.35
FKRP-215ENST00000597403 KIF21AQ7Z4S6 1674 aa12.84□□□□□ -0.35
FKRP-215ENST00000597403 MRC2Q9UBG0 1479 aa12.81□□□□□ -0.36
FKRP-215ENST00000597403 URB2Q14146 1524 aaKnown RBP12.81□□□□□ -0.36
FKRP-215ENST00000597403 ABCC8Q09428 1581 aa12.78□□□□□ -0.36
FKRP-215ENST00000597403 WRNQ14191 1432 aaPredicted RBP eCLIP12.75□□□□□ -0.37
FKRP-215ENST00000597403 TOPBP1Q92547 1522 aa12.75□□□□□ -0.37
FKRP-215ENST00000597403 THOC2Q8NI27 1593 aaKnown RBP12.74□□□□□ -0.37
FKRP-215ENST00000597403 CUX1P39880 1505 aa12.74□□□□□ -0.37
FKRP-215ENST00000597403 PRDM2Q13029 1718 aa12.72□□□□□ -0.37
FKRP-215ENST00000597403 CHIC1Q5VXU3 224 aa12.72□□□□□ -0.37
FKRP-215ENST00000597403 TRIM41Q8WV44 630 aa12.72□□□□□ -0.37
FKRP-215ENST00000597403 WDR62O43379 1518 aa12.72□□□□□ -0.37
FKRP-215ENST00000597403 RAD54L2Q9Y4B4 1467 aa12.69□□□□□ -0.38
FKRP-215ENST00000597403 DNMBPQ6XZF7 1577 aa12.69□□□□□ -0.38
FKRP-215ENST00000597403 SOGA1O94964 1423 aa12.68□□□□□ -0.38
FKRP-215ENST00000597403 CUX2O14529 1486 aa12.67□□□□□ -0.38
FKRP-215ENST00000597403 FGD5Q6ZNL6 1462 aa12.66□□□□□ -0.38
FKRP-215ENST00000597403 SYNJ1O43426 1573 aa12.66□□□□□ -0.38
FKRP-215ENST00000597403 POLA1P09884 1462 aaPredicted RBP12.65□□□□□ -0.38
FKRP-215ENST00000597403 TDRD9Q8NDG6 1382 aaKnown RBP12.63□□□□□ -0.39
FKRP-215ENST00000597403 ZNF608Q9ULD9 1512 aaPredicted RBP12.61□□□□□ -0.39
FKRP-215ENST00000597403 AQRO60306 1485 aaKnown RBP eCLIP12.6□□□□□ -0.39
FKRP-215ENST00000597403 TOP2BQ02880 1626 aa12.6□□□□□ -0.39
FKRP-215ENST00000597403 IFT140Q96RY7 1462 aa12.59□□□□□ -0.39
FKRP-215ENST00000597403 BIVM-ERCC5R4GMW8 1640 aa12.56□□□□□ -0.4
FKRP-215ENST00000597403 FAM9AQ8IZU1 332 aaPredicted RBP12.55□□□□□ -0.4
FKRP-215ENST00000597403 TARBP1Q13395 1621 aaKnown RBP12.54□□□□□ -0.4
FKRP-215ENST00000597403 RUSC2Q8N2Y8 1516 aa12.52□□□□□ -0.4
FKRP-215ENST00000597403 ABCA10Q8WWZ4 1543 aa12.52□□□□□ -0.41
FKRP-215ENST00000597403 FBLN2P98095 1184 aa12.49□□□□□ -0.41
FKRP-215ENST00000597403 GAPVD1Q14C86 1478 aa12.48□□□□□ -0.41
FKRP-215ENST00000597403 IGF1RP08069 1367 aa12.47□□□□□ -0.41
FKRP-215ENST00000597403 KIF27Q86VH2 1401 aa12.46□□□□□ -0.41
FKRP-215ENST00000597403 GRIN2BQ13224 1484 aa12.43□□□□□ -0.42
FKRP-215ENST00000597403 CHMP7Q8WUX9 453 aaPredicted RBP12.43□□□□□ -0.42
FKRP-215ENST00000597403 CSRNP3Q8WYN3 585 aa12.43□□□□□ -0.42
FKRP-215ENST00000597403 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
FKRP-215ENST00000597403 EIF4G3O43432 1585 aaKnown RBP12.43□□□□□ -0.42
FKRP-215ENST00000597403 SNAPC4Q5SXM2 1469 aa12.4□□□□□ -0.42
FKRP-215ENST00000597403 WDR97A6NE52 1622 aa12.4□□□□□ -0.42
FKRP-215ENST00000597403 ABCA5Q8WWZ7 1642 aa12.38□□□□□ -0.43
FKRP-215ENST00000597403 CARMIL1Q5VZK9 1371 aa12.38□□□□□ -0.43
FKRP-215ENST00000597403 OSCARQ8IYS5 282 aa12.36□□□□□ -0.43
FKRP-215ENST00000597403 ERICH3Q5RHP9 1530 aa12.33□□□□□ -0.44
FKRP-215ENST00000597403 FHAD1B1AJZ9 1412 aa12.33□□□□□ -0.44
FKRP-215ENST00000597403 MAGI1Q96QZ7 1491 aaPredicted RBP12.33□□□□□ -0.44
FKRP-215ENST00000597403 LOC105371045A0A1W2PR82 267 aa12.31□□□□□ -0.44
FKRP-215ENST00000597403 SYNJ2O15056 1496 aa12.31□□□□□ -0.44
FKRP-215ENST00000597403 PBRM1Q86U86 1689 aa12.29□□□□□ -0.44
FKRP-215ENST00000597403 EEA1Q15075 1411 aa12.28□□□□□ -0.44
FKRP-215ENST00000597403 GRIN2AQ12879 1464 aa12.27□□□□□ -0.45
FKRP-215ENST00000597403 PRXQ9BXM0 1461 aa12.27□□□□□ -0.45
FKRP-215ENST00000597403 RAPGEF2Q9Y4G8 1499 aa12.27□□□□□ -0.45
FKRP-215ENST00000597403 UBTFP17480 764 aaKnown RBP12.26□□□□□ -0.45
FKRP-215ENST00000597403 ADAMTS12P58397 1594 aa12.26□□□□□ -0.45
FKRP-215ENST00000597403 RANGAP1P46060 587 aaPredicted RBP12.25□□□□□ -0.45
FKRP-215ENST00000597403 JPH4Q96JJ6 628 aa12.23□□□□□ -0.45
FKRP-215ENST00000597403 DNAJC5Q9H3Z4 198 aa12.23□□□□□ -0.45
FKRP-215ENST00000597403 NUP160Q12769 1436 aa12.2□□□□□ -0.46
FKRP-215ENST00000597403 CHD1O14646 1710 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms