RNA–Protein interactions for RNA: ENST00000596778.1

AC003973.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC003973.2, Length 1,394 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC003973.2-201ENST00000596778 AEBP2Q6ZN18 517 aaPredicted RBP18.03■□□□□ 0.48
AC003973.2-201ENST00000596778 CHIC1Q5VXU3 224 aa16.83■□□□□ 0.28
AC003973.2-201ENST00000596778 POTEDQ86YR6 584 aa16.12■□□□□ 0.17
AC003973.2-201ENST00000596778 NISCHQ9Y2I1 1504 aa16.03■□□□□ 0.16
AC003973.2-201ENST00000596778 SENP3Q9H4L4 574 aaPredicted RBP15.59■□□□□ 0.09
AC003973.2-201ENST00000596778 PHF23Q9BUL5 403 aaPredicted RBP15.22■□□□□ 0.03
AC003973.2-201ENST00000596778 FOXD1Q16676 465 aa14.7□□□□□ -0.06
AC003973.2-201ENST00000596778 CCDC180Q9P1Z9 1646 aa14.25□□□□□ -0.13
AC003973.2-201ENST00000596778 MSH5O43196 834 aa14.23□□□□□ -0.13
AC003973.2-201ENST00000596778 ABCC9O60706 1549 aa13.64□□□□□ -0.23
AC003973.2-201ENST00000596778 PIAS4Q8N2W9 510 aaPredicted RBP13.44□□□□□ -0.26
AC003973.2-201ENST00000596778 MYO15BQ96JP2 1530 aa13.43□□□□□ -0.26
AC003973.2-201ENST00000596778 ZCCHC6Q5VYS8 1495 aaKnown RBP13.4□□□□□ -0.26
AC003973.2-201ENST00000596778 DCAF1Q9Y4B6 1507 aa13.39□□□□□ -0.27
AC003973.2-201ENST00000596778 NACADO15069 1562 aa13.36□□□□□ -0.27
AC003973.2-201ENST00000596778 RB1CC1Q8TDY2 1594 aa13.31□□□□□ -0.28
AC003973.2-201ENST00000596778 DCAF8L2P0C7V8 631 aa13.11□□□□□ -0.31
AC003973.2-201ENST00000596778 CACNB1Q02641 598 aaPredicted RBP13.06□□□□□ -0.32
AC003973.2-201ENST00000596778 UNC13AQ9UPW8 1703 aa12.95□□□□□ -0.34
AC003973.2-201ENST00000596778 SHROOM4Q9ULL8 1493 aa12.92□□□□□ -0.34
AC003973.2-201ENST00000596778 BICRAQ9NZM4 1560 aa12.88□□□□□ -0.35
AC003973.2-201ENST00000596778 SCRIBQ14160 1630 aa12.86□□□□□ -0.35
AC003973.2-201ENST00000596778 PPP6R1Q9UPN7 881 aa12.75□□□□□ -0.37
AC003973.2-201ENST00000596778 PABPN1Q86U42 306 aaKnown RBP eCLIP12.72□□□□□ -0.37
AC003973.2-201ENST00000596778 ADRA2BP18089 450 aa12.65□□□□□ -0.38
AC003973.2-201ENST00000596778 EIF4G1Q04637 1599 aaKnown RBP12.52□□□□□ -0.41
AC003973.2-201ENST00000596778 BAZ1AQ9NRL2 1556 aaPredicted RBP12.43□□□□□ -0.42
AC003973.2-201ENST00000596778 CC2D2AQ9P2K1 1620 aa12.4□□□□□ -0.42
AC003973.2-201ENST00000596778 SMARCA4P51532 1647 aa12.4□□□□□ -0.42
AC003973.2-201ENST00000596778 CECR2Q9BXF3 1484 aa12.39□□□□□ -0.43
AC003973.2-201ENST00000596778 DNAJC5BQ9UF47 199 aa12.39□□□□□ -0.43
AC003973.2-201ENST00000596778 POTEHQ6S545 545 aa12.38□□□□□ -0.43
AC003973.2-201ENST00000596778 PEG3Q9GZU2 1588 aa12.37□□□□□ -0.43
AC003973.2-201ENST00000596778 SMARCA2P51531 1590 aa12.33□□□□□ -0.44
AC003973.2-201ENST00000596778 NCAPD3P42695 1498 aa12.33□□□□□ -0.44
AC003973.2-201ENST00000596778 ATAD2BQ9ULI0 1458 aa12.3□□□□□ -0.44
AC003973.2-201ENST00000596778 MROH2BQ7Z745 1585 aa12.3□□□□□ -0.44
AC003973.2-201ENST00000596778 HMGXB3Q12766 1538 aa12.29□□□□□ -0.44
AC003973.2-201ENST00000596778 PLPPR3Q6T4P5 718 aa12.24□□□□□ -0.45
AC003973.2-201ENST00000596778 RSF1Q96T23 1441 aaPredicted RBP12.24□□□□□ -0.45
AC003973.2-201ENST00000596778 BAZ1BQ9UIG0 1483 aaKnown RBP12.18□□□□□ -0.46
AC003973.2-201ENST00000596778 WIZO95785 1651 aa12.15□□□□□ -0.46
AC003973.2-201ENST00000596778 DMRT2Q9Y5R5 561 aa12.14□□□□□ -0.47
AC003973.2-201ENST00000596778 TOP2AP11388 1531 aaKnown RBP12.11□□□□□ -0.47
AC003973.2-201ENST00000596778 EHMT2Q96KQ7 1210 aa12.04□□□□□ -0.48
AC003973.2-201ENST00000596778 RNF39Q9H2S5 420 aa12.02□□□□□ -0.49
AC003973.2-201ENST00000596778 MAPK8IP2Q13387 824 aaPredicted RBP12.01□□□□□ -0.49
AC003973.2-201ENST00000596778 LAMC3Q9Y6N6 1575 aa11.97□□□□□ -0.49
AC003973.2-201ENST00000596778 CADPSQ9ULU8 1353 aa11.93□□□□□ -0.5
AC003973.2-201ENST00000596778 CCDC88BA6NC98 1476 aa11.92□□□□□ -0.5
AC003973.2-201ENST00000596778 CFTRP13569 1480 aa11.92□□□□□ -0.5
AC003973.2-201ENST00000596778 PDS5BQ9NTI5 1447 aa11.86□□□□□ -0.51
AC003973.2-201ENST00000596778 SUPT5HO00267 1087 aaKnown RBP11.85□□□□□ -0.51
AC003973.2-201ENST00000596778 NESP48681 1621 aa11.84□□□□□ -0.51
AC003973.2-201ENST00000596778 PRDM2Q13029 1718 aa11.82□□□□□ -0.52
AC003973.2-201ENST00000596778 DCAF8L1A6NGE4 600 aa11.8□□□□□ -0.52
AC003973.2-201ENST00000596778 C1QBPQ07021 282 aaKnown RBP11.78□□□□□ -0.52
AC003973.2-201ENST00000596778 ERCC6Q03468 1493 aa11.77□□□□□ -0.52
AC003973.2-201ENST00000596778 FANCD2Q9BXW9 1451 aa11.76□□□□□ -0.53
AC003973.2-201ENST00000596778 KIF21AQ7Z4S6 1674 aa11.75□□□□□ -0.53
AC003973.2-201ENST00000596778 CEP164Q9UPV0 1460 aa11.74□□□□□ -0.53
AC003973.2-201ENST00000596778 THOC2Q8NI27 1593 aaKnown RBP11.73□□□□□ -0.53
AC003973.2-201ENST00000596778 CUX2O14529 1486 aa11.72□□□□□ -0.53
AC003973.2-201ENST00000596778 MRC2Q9UBG0 1479 aa11.71□□□□□ -0.53
AC003973.2-201ENST00000596778 WDR62O43379 1518 aa11.7□□□□□ -0.54
AC003973.2-201ENST00000596778 ABCC8Q09428 1581 aa11.69□□□□□ -0.54
AC003973.2-201ENST00000596778 KCNA4P22459 653 aa11.67□□□□□ -0.54
AC003973.2-201ENST00000596778 URB2Q14146 1524 aaKnown RBP11.63□□□□□ -0.55
AC003973.2-201ENST00000596778 DNMBPQ6XZF7 1577 aa11.62□□□□□ -0.55
AC003973.2-201ENST00000596778 TOPBP1Q92547 1522 aa11.6□□□□□ -0.55
AC003973.2-201ENST00000596778 SCAF1Q9H7N4 1312 aaKnown RBP11.56□□□□□ -0.56
AC003973.2-201ENST00000596778 CUX1P39880 1505 aa11.54□□□□□ -0.56
AC003973.2-201ENST00000596778 WRNQ14191 1432 aaPredicted RBP eCLIP11.53□□□□□ -0.56
AC003973.2-201ENST00000596778 IFT140Q96RY7 1462 aa11.53□□□□□ -0.56
AC003973.2-201ENST00000596778 TOP2BQ02880 1626 aa11.52□□□□□ -0.56
AC003973.2-201ENST00000596778 BIVM-ERCC5R4GMW8 1640 aa11.52□□□□□ -0.56
AC003973.2-201ENST00000596778 WDR97A6NE52 1622 aa11.51□□□□□ -0.57
AC003973.2-201ENST00000596778 POLA1P09884 1462 aaPredicted RBP11.5□□□□□ -0.57
AC003973.2-201ENST00000596778 TARBP1Q13395 1621 aaKnown RBP11.48□□□□□ -0.57
AC003973.2-201ENST00000596778 FGD5Q6ZNL6 1462 aa11.48□□□□□ -0.57
AC003973.2-201ENST00000596778 SYNJ1O43426 1573 aa11.46□□□□□ -0.57
AC003973.2-201ENST00000596778 SOGA1O94964 1423 aa11.44□□□□□ -0.58
AC003973.2-201ENST00000596778 ABCA10Q8WWZ4 1543 aa11.44□□□□□ -0.58
AC003973.2-201ENST00000596778 CSRNP3Q8WYN3 585 aa11.4□□□□□ -0.59
AC003973.2-201ENST00000596778 RAD54L2Q9Y4B4 1467 aa11.39□□□□□ -0.59
AC003973.2-201ENST00000596778 EIF4G3O43432 1585 aaKnown RBP11.38□□□□□ -0.59
AC003973.2-201ENST00000596778 ZNF608Q9ULD9 1512 aaPredicted RBP11.37□□□□□ -0.59
AC003973.2-201ENST00000596778 ABCA5Q8WWZ7 1642 aa11.36□□□□□ -0.59
AC003973.2-201ENST00000596778 GRIN2BQ13224 1484 aa11.33□□□□□ -0.6
AC003973.2-201ENST00000596778 GAPVD1Q14C86 1478 aa11.33□□□□□ -0.6
AC003973.2-201ENST00000596778 SLC24A1O60721 1099 aa11.32□□□□□ -0.6
AC003973.2-201ENST00000596778 ERICH3Q5RHP9 1530 aa11.32□□□□□ -0.6
AC003973.2-201ENST00000596778 AQRO60306 1485 aaKnown RBP eCLIP11.32□□□□□ -0.6
AC003973.2-201ENST00000596778 MAGI1Q96QZ7 1491 aaPredicted RBP11.32□□□□□ -0.6
AC003973.2-201ENST00000596778 TDRD9Q8NDG6 1382 aaKnown RBP11.32□□□□□ -0.6
AC003973.2-201ENST00000596778 KIF27Q86VH2 1401 aa11.3□□□□□ -0.6
AC003973.2-201ENST00000596778 SLC4A1APQ9BWU0 796 aaKnown RBP11.28□□□□□ -0.6
AC003973.2-201ENST00000596778 PBRM1Q86U86 1689 aa11.28□□□□□ -0.6
AC003973.2-201ENST00000596778 TRIM41Q8WV44 630 aa11.28□□□□□ -0.6
AC003973.2-201ENST00000596778 SYNJ2O15056 1496 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms