RNA–Protein interactions for RNA: ENST00000596714.1

SMG9-204, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-204ENST00000596714 NISCHQ9Y2I1 1504 aa41.39■■■■■ 4.22
SMG9-204ENST00000596714 CCDC180Q9P1Z9 1646 aa36.71■■■■□ 3.47
SMG9-204ENST00000596714 ABCC9O60706 1549 aa35.64■■■■□ 3.3
SMG9-204ENST00000596714 DCAF8L2P0C7V8 631 aa34.55■■■■□ 3.12
SMG9-204ENST00000596714 ZCCHC6Q5VYS8 1495 aaKnown RBP34.52■■■■□ 3.12
SMG9-204ENST00000596714 NACADO15069 1562 aa34.47■■■■□ 3.11
SMG9-204ENST00000596714 RB1CC1Q8TDY2 1594 aa34.45■■■■□ 3.11
SMG9-204ENST00000596714 MYO15BQ96JP2 1530 aa34.34■■■■□ 3.09
SMG9-204ENST00000596714 DCAF1Q9Y4B6 1507 aa34.28■■■■□ 3.08
SMG9-204ENST00000596714 UNC13AQ9UPW8 1703 aa33.58■■■□□ 2.97
SMG9-204ENST00000596714 SCRIBQ14160 1630 aa33.5■■■□□ 2.95
SMG9-204ENST00000596714 PABPN1Q86U42 306 aaKnown RBP eCLIP33.34■■■□□ 2.93
SMG9-204ENST00000596714 BICRAQ9NZM4 1560 aa33.29■■■□□ 2.92
SMG9-204ENST00000596714 SHROOM4Q9ULL8 1493 aa33.09■■■□□ 2.89
SMG9-204ENST00000596714 EIF4G1Q04637 1599 aaKnown RBP32.45■■■□□ 2.79
SMG9-204ENST00000596714 DNAJC5BQ9UF47 199 aa32.37■■■□□ 2.77
SMG9-204ENST00000596714 CC2D2AQ9P2K1 1620 aa32.25■■■□□ 2.75
SMG9-204ENST00000596714 CECR2Q9BXF3 1484 aa32.16■■■□□ 2.74
SMG9-204ENST00000596714 BAZ1AQ9NRL2 1556 aaPredicted RBP32.11■■■□□ 2.73
SMG9-204ENST00000596714 SMARCA4P51532 1647 aa32.07■■■□□ 2.72
SMG9-204ENST00000596714 MROH2BQ7Z745 1585 aa31.86■■■□□ 2.69
SMG9-204ENST00000596714 SMARCA2P51531 1590 aa31.85■■■□□ 2.69
SMG9-204ENST00000596714 ATAD2BQ9ULI0 1458 aa31.81■■■□□ 2.68
SMG9-204ENST00000596714 NCAPD3P42695 1498 aa31.77■■■□□ 2.68
SMG9-204ENST00000596714 PEG3Q9GZU2 1588 aa31.74■■■□□ 2.67
SMG9-204ENST00000596714 HMGXB3Q12766 1538 aa31.65■■■□□ 2.66
SMG9-204ENST00000596714 RSF1Q96T23 1441 aaPredicted RBP31.62■■■□□ 2.65
SMG9-204ENST00000596714 BAZ1BQ9UIG0 1483 aaKnown RBP31.62■■■□□ 2.65
SMG9-204ENST00000596714 WIZO95785 1651 aa31.55■■■□□ 2.64
SMG9-204ENST00000596714 TOP2AP11388 1531 aaKnown RBP31.27■■■□□ 2.6
SMG9-204ENST00000596714 SUPT5HO00267 1087 aaKnown RBP31.07■■■□□ 2.56
SMG9-204ENST00000596714 LAMC3Q9Y6N6 1575 aa30.92■■■□□ 2.54
SMG9-204ENST00000596714 NESP48681 1621 aa30.88■■■□□ 2.53
SMG9-204ENST00000596714 CADPSQ9ULU8 1353 aa30.88■■■□□ 2.53
SMG9-204ENST00000596714 CCDC88BA6NC98 1476 aa30.88■■■□□ 2.53
SMG9-204ENST00000596714 ERCC6Q03468 1493 aa30.78■■■□□ 2.52
SMG9-204ENST00000596714 PDS5BQ9NTI5 1447 aa30.73■■■□□ 2.51
SMG9-204ENST00000596714 CFTRP13569 1480 aa30.73■■■□□ 2.51
SMG9-204ENST00000596714 KIF21AQ7Z4S6 1674 aa30.55■■■□□ 2.48
SMG9-204ENST00000596714 PRDM2Q13029 1718 aa30.54■■■□□ 2.48
SMG9-204ENST00000596714 FANCD2Q9BXW9 1451 aa30.52■■■□□ 2.48
SMG9-204ENST00000596714 CEP164Q9UPV0 1460 aa30.49■■■□□ 2.47
SMG9-204ENST00000596714 THOC2Q8NI27 1593 aaKnown RBP30.37■■■□□ 2.45
SMG9-204ENST00000596714 MRC2Q9UBG0 1479 aa30.37■■■□□ 2.45
SMG9-204ENST00000596714 CUX2O14529 1486 aa30.32■■■□□ 2.44
SMG9-204ENST00000596714 WDR62O43379 1518 aa30.23■■■□□ 2.43
SMG9-204ENST00000596714 URB2Q14146 1524 aaKnown RBP30.16■■■□□ 2.42
SMG9-204ENST00000596714 ABCC8Q09428 1581 aa30.14■■■□□ 2.42
SMG9-204ENST00000596714 DNMBPQ6XZF7 1577 aa30.05■■■□□ 2.4
SMG9-204ENST00000596714 TOPBP1Q92547 1522 aa30.05■■■□□ 2.4
SMG9-204ENST00000596714 CUX1P39880 1505 aa29.89■■■□□ 2.38
SMG9-204ENST00000596714 WRNQ14191 1432 aaPredicted RBP eCLIP29.86■■■□□ 2.37
SMG9-204ENST00000596714 IFT140Q96RY7 1462 aa29.83■■■□□ 2.37
SMG9-204ENST00000596714 POLA1P09884 1462 aaPredicted RBP29.8■■■□□ 2.36
SMG9-204ENST00000596714 FGD5Q6ZNL6 1462 aa29.78■■■□□ 2.36
SMG9-204ENST00000596714 TOP2BQ02880 1626 aa29.74■■■□□ 2.35
SMG9-204ENST00000596714 BIVM-ERCC5R4GMW8 1640 aa29.73■■■□□ 2.35
SMG9-204ENST00000596714 SOGA1O94964 1423 aa29.71■■■□□ 2.35
SMG9-204ENST00000596714 SYNJ1O43426 1573 aa29.71■■■□□ 2.35
SMG9-204ENST00000596714 TARBP1Q13395 1621 aaKnown RBP29.67■■■□□ 2.34
SMG9-204ENST00000596714 RAD54L2Q9Y4B4 1467 aa29.65■■■□□ 2.34
SMG9-204ENST00000596714 ZNF608Q9ULD9 1512 aaPredicted RBP29.6■■■□□ 2.33
SMG9-204ENST00000596714 WDR97A6NE52 1622 aa29.54■■■□□ 2.32
SMG9-204ENST00000596714 EIF4G3O43432 1585 aaKnown RBP29.54■■■□□ 2.32
SMG9-204ENST00000596714 ABCA10Q8WWZ4 1543 aa29.51■■■□□ 2.32
SMG9-204ENST00000596714 AQRO60306 1485 aaKnown RBP eCLIP29.49■■■□□ 2.31
SMG9-204ENST00000596714 TDRD9Q8NDG6 1382 aaKnown RBP29.49■■■□□ 2.31
SMG9-204ENST00000596714 GAPVD1Q14C86 1478 aa29.38■■■□□ 2.29
SMG9-204ENST00000596714 TRIM41Q8WV44 630 aa29.38■■■□□ 2.29
SMG9-204ENST00000596714 ABCA5Q8WWZ7 1642 aa29.35■■■□□ 2.29
SMG9-204ENST00000596714 GRIN2BQ13224 1484 aa29.35■■■□□ 2.29
SMG9-204ENST00000596714 PBRM1Q86U86 1689 aa29.29■■■□□ 2.28
SMG9-204ENST00000596714 SNAPC4Q5SXM2 1469 aa29.25■■■□□ 2.27
SMG9-204ENST00000596714 MAGI1Q96QZ7 1491 aaPredicted RBP29.25■■■□□ 2.27
SMG9-204ENST00000596714 KIF27Q86VH2 1401 aa29.25■■■□□ 2.27
SMG9-204ENST00000596714 ERICH3Q5RHP9 1530 aa29.19■■■□□ 2.26
SMG9-204ENST00000596714 FBLN2P98095 1184 aa29.16■■■□□ 2.26
SMG9-204ENST00000596714 OSCARQ8IYS5 282 aa29.14■■■□□ 2.26
SMG9-204ENST00000596714 CHMP7Q8WUX9 453 aaPredicted RBP29.13■■■□□ 2.25
SMG9-204ENST00000596714 SYNJ2O15056 1496 aa29.12■■■□□ 2.25
SMG9-204ENST00000596714 CHIC1Q5VXU3 224 aa29.11■■■□□ 2.25
SMG9-204ENST00000596714 CHD1O14646 1710 aa29.11■■■□□ 2.25
SMG9-204ENST00000596714 ADAMTS12P58397 1594 aa29.07■■■□□ 2.24
SMG9-204ENST00000596714 FHAD1B1AJZ9 1412 aa29.06■■■□□ 2.24
SMG9-204ENST00000596714 DNAJC5Q9H3Z4 198 aa29.04■■■□□ 2.24
SMG9-204ENST00000596714 IGF1RP08069 1367 aa29.01■■■□□ 2.24
SMG9-204ENST00000596714 CUL7Q14999 1698 aa28.99■■■□□ 2.23
SMG9-204ENST00000596714 GRIN2AQ12879 1464 aa28.96■■■□□ 2.23
SMG9-204ENST00000596714 RUSC2Q8N2Y8 1516 aa28.93■■■□□ 2.22
SMG9-204ENST00000596714 CARMIL1Q5VZK9 1371 aa28.89■■■□□ 2.22
SMG9-204ENST00000596714 EEA1Q15075 1411 aa28.88■■■□□ 2.21
SMG9-204ENST00000596714 NUP160Q12769 1436 aa28.79■■■□□ 2.2
SMG9-204ENST00000596714 CLASP1Q7Z460 1538 aa28.78■■■□□ 2.2
SMG9-204ENST00000596714 CSRNP3Q8WYN3 585 aa28.77■■■□□ 2.2
SMG9-204ENST00000596714 RAPGEF2Q9Y4G8 1499 aa28.77■■■□□ 2.2
SMG9-204ENST00000596714 CEP170Q5SW79 1584 aa28.76■■■□□ 2.19
SMG9-204ENST00000596714 FAM9AQ8IZU1 332 aaPredicted RBP28.71■■■□□ 2.19
SMG9-204ENST00000596714 PRXQ9BXM0 1461 aa28.68■■■□□ 2.18
SMG9-204ENST00000596714 KIAA0586Q9BVV6 1533 aa28.62■■■□□ 2.17
SMG9-204ENST00000596714 ARHGEF11O15085 1522 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms