RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 NISCHQ9Y2I1 1504 aa35.61■■■■□ 3.29
DDX49-204ENST00000595858 CCDC180Q9P1Z9 1646 aa31.43■■■□□ 2.62
DDX49-204ENST00000595858 ABCC9O60706 1549 aa30.5■■■□□ 2.47
DDX49-204ENST00000595858 ZCCHC6Q5VYS8 1495 aaKnown RBP29.72■■■□□ 2.35
DDX49-204ENST00000595858 DCAF8L2P0C7V8 631 aa29.7■■■□□ 2.34
DDX49-204ENST00000595858 NACADO15069 1562 aa29.51■■■□□ 2.31
DDX49-204ENST00000595858 DCAF1Q9Y4B6 1507 aa29.46■■■□□ 2.31
DDX49-204ENST00000595858 MYO15BQ96JP2 1530 aa29.45■■■□□ 2.3
DDX49-204ENST00000595858 RB1CC1Q8TDY2 1594 aa29.45■■■□□ 2.3
DDX49-204ENST00000595858 UNC13AQ9UPW8 1703 aa28.75■■■□□ 2.19
DDX49-204ENST00000595858 SCRIBQ14160 1630 aa28.75■■■□□ 2.19
DDX49-204ENST00000595858 PABPN1Q86U42 306 aaKnown RBP eCLIP28.61■■■□□ 2.17
DDX49-204ENST00000595858 BICRAQ9NZM4 1560 aa28.55■■■□□ 2.16
DDX49-204ENST00000595858 SHROOM4Q9ULL8 1493 aa28.4■■■□□ 2.14
DDX49-204ENST00000595858 EIF4G1Q04637 1599 aaKnown RBP27.77■■■□□ 2.04
DDX49-204ENST00000595858 CECR2Q9BXF3 1484 aa27.73■■■□□ 2.03
DDX49-204ENST00000595858 DNAJC5BQ9UF47 199 aa27.72■■■□□ 2.03
DDX49-204ENST00000595858 CC2D2AQ9P2K1 1620 aa27.57■■■□□ 2
DDX49-204ENST00000595858 BAZ1AQ9NRL2 1556 aaPredicted RBP27.56■■■□□ 2
DDX49-204ENST00000595858 SMARCA4P51532 1647 aa27.53■■■□□ 2
DDX49-204ENST00000595858 MROH2BQ7Z745 1585 aa27.46■■□□□ 1.99
DDX49-204ENST00000595858 ATAD2BQ9ULI0 1458 aa27.33■■□□□ 1.97
DDX49-204ENST00000595858 RSF1Q96T23 1441 aaPredicted RBP27.29■■□□□ 1.96
DDX49-204ENST00000595858 SMARCA2P51531 1590 aa27.28■■□□□ 1.96
DDX49-204ENST00000595858 NCAPD3P42695 1498 aa27.26■■□□□ 1.95
DDX49-204ENST00000595858 PEG3Q9GZU2 1588 aa27.25■■□□□ 1.95
DDX49-204ENST00000595858 WIZO95785 1651 aa27.16■■□□□ 1.94
DDX49-204ENST00000595858 HMGXB3Q12766 1538 aa27.11■■□□□ 1.93
DDX49-204ENST00000595858 BAZ1BQ9UIG0 1483 aaKnown RBP27.1■■□□□ 1.93
DDX49-204ENST00000595858 SUPT5HO00267 1087 aaKnown RBP26.93■■□□□ 1.9
DDX49-204ENST00000595858 TOP2AP11388 1531 aaKnown RBP26.89■■□□□ 1.89
DDX49-204ENST00000595858 CCDC88BA6NC98 1476 aa26.61■■□□□ 1.85
DDX49-204ENST00000595858 CADPSQ9ULU8 1353 aa26.5■■□□□ 1.83
DDX49-204ENST00000595858 NESP48681 1621 aa26.5■■□□□ 1.83
DDX49-204ENST00000595858 LAMC3Q9Y6N6 1575 aa26.44■■□□□ 1.82
DDX49-204ENST00000595858 CFTRP13569 1480 aa26.4■■□□□ 1.82
DDX49-204ENST00000595858 PDS5BQ9NTI5 1447 aa26.29■■□□□ 1.8
DDX49-204ENST00000595858 ERCC6Q03468 1493 aa26.24■■□□□ 1.79
DDX49-204ENST00000595858 FANCD2Q9BXW9 1451 aa26.17■■□□□ 1.78
DDX49-204ENST00000595858 PRDM2Q13029 1718 aa26.14■■□□□ 1.77
DDX49-204ENST00000595858 KIF21AQ7Z4S6 1674 aa26.13■■□□□ 1.77
DDX49-204ENST00000595858 CEP164Q9UPV0 1460 aa26.09■■□□□ 1.77
DDX49-204ENST00000595858 MRC2Q9UBG0 1479 aa25.97■■□□□ 1.75
DDX49-204ENST00000595858 THOC2Q8NI27 1593 aaKnown RBP25.96■■□□□ 1.75
DDX49-204ENST00000595858 URB2Q14146 1524 aaKnown RBP25.88■■□□□ 1.73
DDX49-204ENST00000595858 WDR62O43379 1518 aa25.86■■□□□ 1.73
DDX49-204ENST00000595858 CUX2O14529 1486 aa25.82■■□□□ 1.72
DDX49-204ENST00000595858 ABCC8Q09428 1581 aa25.81■■□□□ 1.72
DDX49-204ENST00000595858 TOPBP1Q92547 1522 aa25.79■■□□□ 1.72
DDX49-204ENST00000595858 DNMBPQ6XZF7 1577 aa25.76■■□□□ 1.71
DDX49-204ENST00000595858 CUX1P39880 1505 aa25.73■■□□□ 1.71
DDX49-204ENST00000595858 WRNQ14191 1432 aaPredicted RBP eCLIP25.72■■□□□ 1.71
DDX49-204ENST00000595858 SYNJ1O43426 1573 aa25.6■■□□□ 1.69
DDX49-204ENST00000595858 POLA1P09884 1462 aaPredicted RBP25.6■■□□□ 1.69
DDX49-204ENST00000595858 FGD5Q6ZNL6 1462 aa25.59■■□□□ 1.69
DDX49-204ENST00000595858 TOP2BQ02880 1626 aa25.58■■□□□ 1.69
DDX49-204ENST00000595858 BIVM-ERCC5R4GMW8 1640 aa25.56■■□□□ 1.68
DDX49-204ENST00000595858 IFT140Q96RY7 1462 aa25.53■■□□□ 1.68
DDX49-204ENST00000595858 SOGA1O94964 1423 aa25.53■■□□□ 1.68
DDX49-204ENST00000595858 RAD54L2Q9Y4B4 1467 aa25.5■■□□□ 1.67
DDX49-204ENST00000595858 TARBP1Q13395 1621 aaKnown RBP25.46■■□□□ 1.67
DDX49-204ENST00000595858 ZNF608Q9ULD9 1512 aaPredicted RBP25.41■■□□□ 1.66
DDX49-204ENST00000595858 TRIM41Q8WV44 630 aa25.4■■□□□ 1.66
DDX49-204ENST00000595858 ABCA10Q8WWZ4 1543 aa25.36■■□□□ 1.65
DDX49-204ENST00000595858 TDRD9Q8NDG6 1382 aaKnown RBP25.35■■□□□ 1.65
DDX49-204ENST00000595858 CHIC1Q5VXU3 224 aa25.34■■□□□ 1.65
DDX49-204ENST00000595858 AQRO60306 1485 aaKnown RBP eCLIP25.33■■□□□ 1.65
DDX49-204ENST00000595858 WDR97A6NE52 1622 aa25.3■■□□□ 1.64
DDX49-204ENST00000595858 EIF4G3O43432 1585 aaKnown RBP25.27■■□□□ 1.64
DDX49-204ENST00000595858 GAPVD1Q14C86 1478 aa25.22■■□□□ 1.63
DDX49-204ENST00000595858 ABCA5Q8WWZ7 1642 aa25.19■■□□□ 1.62
DDX49-204ENST00000595858 GRIN2BQ13224 1484 aa25.16■■□□□ 1.62
DDX49-204ENST00000595858 KIF27Q86VH2 1401 aa25.15■■□□□ 1.62
DDX49-204ENST00000595858 PBRM1Q86U86 1689 aa25.07■■□□□ 1.6
DDX49-204ENST00000595858 SNAPC4Q5SXM2 1469 aa25.07■■□□□ 1.6
DDX49-204ENST00000595858 RUSC2Q8N2Y8 1516 aa25.05■■□□□ 1.6
DDX49-204ENST00000595858 ERICH3Q5RHP9 1530 aa25.05■■□□□ 1.6
DDX49-204ENST00000595858 MAGI1Q96QZ7 1491 aaPredicted RBP25.04■■□□□ 1.6
DDX49-204ENST00000595858 IGF1RP08069 1367 aa25.04■■□□□ 1.6
DDX49-204ENST00000595858 FBLN2P98095 1184 aa24.98■■□□□ 1.59
DDX49-204ENST00000595858 CHMP7Q8WUX9 453 aaPredicted RBP24.96■■□□□ 1.59
DDX49-204ENST00000595858 SYNJ2O15056 1496 aa24.95■■□□□ 1.58
DDX49-204ENST00000595858 FHAD1B1AJZ9 1412 aa24.95■■□□□ 1.58
DDX49-204ENST00000595858 ADAMTS12P58397 1594 aa24.92■■□□□ 1.58
DDX49-204ENST00000595858 EEA1Q15075 1411 aa24.9■■□□□ 1.58
DDX49-204ENST00000595858 CARMIL1Q5VZK9 1371 aa24.89■■□□□ 1.57
DDX49-204ENST00000595858 OSCARQ8IYS5 282 aa24.88■■□□□ 1.57
DDX49-204ENST00000595858 FAM9AQ8IZU1 332 aaPredicted RBP24.88■■□□□ 1.57
DDX49-204ENST00000595858 CSRNP3Q8WYN3 585 aa24.87■■□□□ 1.57
DDX49-204ENST00000595858 CHD1O14646 1710 aa24.87■■□□□ 1.57
DDX49-204ENST00000595858 CUL7Q14999 1698 aa24.86■■□□□ 1.57
DDX49-204ENST00000595858 GRIN2AQ12879 1464 aa24.83■■□□□ 1.57
DDX49-204ENST00000595858 PRXQ9BXM0 1461 aa24.76■■□□□ 1.55
DDX49-204ENST00000595858 RAPGEF2Q9Y4G8 1499 aa24.76■■□□□ 1.55
DDX49-204ENST00000595858 NUP160Q12769 1436 aa24.71■■□□□ 1.55
DDX49-204ENST00000595858 CEP170Q5SW79 1584 aa24.68■■□□□ 1.54
DDX49-204ENST00000595858 DNAJC5Q9H3Z4 198 aa24.67■■□□□ 1.54
DDX49-204ENST00000595858 CLASP1Q7Z460 1538 aa24.63■■□□□ 1.53
DDX49-204ENST00000595858 KIF21BO75037 1637 aa24.58■■□□□ 1.53
DDX49-204ENST00000595858 KIAA0586Q9BVV6 1533 aa24.58■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms