RNA–Protein interactions for RNA: ENST00000595566.1

LINC01872-202, Transcript of long intergenic non-protein coding RNA 1872, humanhuman

TSL 3

Gene LINC01872, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01872-202ENST00000595566 NISCHQ9Y2I1 1504 aa18.81■□□□□ 0.6
LINC01872-202ENST00000595566 ABCC9O60706 1549 aa18.37■□□□□ 0.53
LINC01872-202ENST00000595566 DNAJC5BQ9UF47 199 aa18.18■□□□□ 0.5
LINC01872-202ENST00000595566 DNAJC5Q9H3Z4 198 aa17.39■□□□□ 0.37
LINC01872-202ENST00000595566 CCDC180Q9P1Z9 1646 aa17.24■□□□□ 0.35
LINC01872-202ENST00000595566 PABPN1Q86U42 306 aaKnown RBP eCLIP17.01■□□□□ 0.31
LINC01872-202ENST00000595566 RB1CC1Q8TDY2 1594 aa16.95■□□□□ 0.3
LINC01872-202ENST00000595566 CECR2Q9BXF3 1484 aa16.63■□□□□ 0.25
LINC01872-202ENST00000595566 NACADO15069 1562 aa16.58■□□□□ 0.24
LINC01872-202ENST00000595566 UNC13AQ9UPW8 1703 aa16.56■□□□□ 0.24
LINC01872-202ENST00000595566 BICRAQ9NZM4 1560 aa16.51■□□□□ 0.23
LINC01872-202ENST00000595566 CC2D2AQ9P2K1 1620 aa16.49■□□□□ 0.23
LINC01872-202ENST00000595566 DCAF8L2P0C7V8 631 aa16.48■□□□□ 0.23
LINC01872-202ENST00000595566 TRIM41Q8WV44 630 aa16.29■□□□□ 0.2
LINC01872-202ENST00000595566 EIF4G1Q04637 1599 aaKnown RBP16.2■□□□□ 0.18
LINC01872-202ENST00000595566 CUX2O14529 1486 aa16.16■□□□□ 0.18
LINC01872-202ENST00000595566 SHROOM4Q9ULL8 1493 aa16.1■□□□□ 0.17
LINC01872-202ENST00000595566 MYO15BQ96JP2 1530 aa15.97■□□□□ 0.15
LINC01872-202ENST00000595566 ERCC6Q03468 1493 aa15.91■□□□□ 0.14
LINC01872-202ENST00000595566 SCRIBQ14160 1630 aa15.76■□□□□ 0.11
LINC01872-202ENST00000595566 AEBP2Q6ZN18 517 aaPredicted RBP15.56■□□□□ 0.08
LINC01872-202ENST00000595566 NESP48681 1621 aa15.49■□□□□ 0.07
LINC01872-202ENST00000595566 THOC2Q8NI27 1593 aaKnown RBP15.46■□□□□ 0.07
LINC01872-202ENST00000595566 DCAF1Q9Y4B6 1507 aa15.41■□□□□ 0.06
LINC01872-202ENST00000595566 ZCCHC6Q5VYS8 1495 aaKnown RBP15.35■□□□□ 0.05
LINC01872-202ENST00000595566 OSCARQ8IYS5 282 aa15.35■□□□□ 0.05
LINC01872-202ENST00000595566 NCAPD3P42695 1498 aa15.34■□□□□ 0.05
LINC01872-202ENST00000595566 SMARCA2P51531 1590 aa15.32■□□□□ 0.04
LINC01872-202ENST00000595566 TRHP20396 242 aaPredicted RBP15.27■□□□□ 0.04
LINC01872-202ENST00000595566 BAZ1AQ9NRL2 1556 aaPredicted RBP15.27■□□□□ 0.03
LINC01872-202ENST00000595566 RIMBP3CA6NJZ7 1639 aa15.21■□□□□ 0.02
LINC01872-202ENST00000595566 RIMBP3BA6NNM3 1639 aa15.21■□□□□ 0.02
LINC01872-202ENST00000595566 RIMBP3Q9UFD9 1639 aa15.21■□□□□ 0.02
LINC01872-202ENST00000595566 KIF21AQ7Z4S6 1674 aa15.2■□□□□ 0.02
LINC01872-202ENST00000595566 ATAD2BQ9ULI0 1458 aa15.18■□□□□ 0.02
LINC01872-202ENST00000595566 LAMC3Q9Y6N6 1575 aa15.14■□□□□ 0.01
LINC01872-202ENST00000595566 PDS5BQ9NTI5 1447 aa15.12■□□□□ 0.01
LINC01872-202ENST00000595566 CYB5RLQ6IPT4 315 aa15.1■□□□□ 0.01
LINC01872-202ENST00000595566 ILDR1Q86SU0 546 aaPredicted RBP15.1■□□□□ 0.01
LINC01872-202ENST00000595566 HMGXB3Q12766 1538 aa15.1■□□□□ 0.01
LINC01872-202ENST00000595566 ARHGEF11O15085 1522 aa15.06■□□□□ 0
LINC01872-202ENST00000595566 MRC2Q9UBG0 1479 aa15.05■□□□□ -0
LINC01872-202ENST00000595566 WDR62O43379 1518 aa15.02■□□□□ -0
LINC01872-202ENST00000595566 BAZ1BQ9UIG0 1483 aaKnown RBP14.97□□□□□ -0.01
LINC01872-202ENST00000595566 SMARCA4P51532 1647 aa14.88□□□□□ -0.03
LINC01872-202ENST00000595566 CADPSQ9ULU8 1353 aa14.86□□□□□ -0.03
LINC01872-202ENST00000595566 ARAP1Q96P48 1450 aa14.85□□□□□ -0.03
LINC01872-202ENST00000595566 CEP164Q9UPV0 1460 aa14.78□□□□□ -0.04
LINC01872-202ENST00000595566 PEG3Q9GZU2 1588 aa14.7□□□□□ -0.06
LINC01872-202ENST00000595566 FANCD2Q9BXW9 1451 aa14.69□□□□□ -0.06
LINC01872-202ENST00000595566 ZNF608Q9ULD9 1512 aaPredicted RBP14.65□□□□□ -0.06
LINC01872-202ENST00000595566 URB2Q14146 1524 aaKnown RBP14.63□□□□□ -0.07
LINC01872-202ENST00000595566 RSF1Q96T23 1441 aaPredicted RBP14.61□□□□□ -0.07
LINC01872-202ENST00000595566 FBLN2P98095 1184 aa14.57□□□□□ -0.08
LINC01872-202ENST00000595566 CHD1O14646 1710 aa14.54□□□□□ -0.08
LINC01872-202ENST00000595566 IFT140Q96RY7 1462 aa14.52□□□□□ -0.08
LINC01872-202ENST00000595566 MROH2BQ7Z745 1585 aa14.51□□□□□ -0.09
LINC01872-202ENST00000595566 KDM4FA0A1W2PPD8 638 aa14.49□□□□□ -0.09
LINC01872-202ENST00000595566 CFTRP13569 1480 aa14.46□□□□□ -0.09
LINC01872-202ENST00000595566 EIF4G3O43432 1585 aaKnown RBP14.46□□□□□ -0.09
LINC01872-202ENST00000595566 AQRO60306 1485 aaKnown RBP eCLIP14.4□□□□□ -0.1
LINC01872-202ENST00000595566 CLASP1Q7Z460 1538 aa14.35□□□□□ -0.11
LINC01872-202ENST00000595566 GAPVD1Q14C86 1478 aa14.32□□□□□ -0.12
LINC01872-202ENST00000595566 FBXO41Q8TF61 875 aa14.3□□□□□ -0.12
LINC01872-202ENST00000595566 TOPBP1Q92547 1522 aa14.29□□□□□ -0.12
LINC01872-202ENST00000595566 WIZO95785 1651 aa14.29□□□□□ -0.12
LINC01872-202ENST00000595566 CHMP7Q8WUX9 453 aaPredicted RBP14.25□□□□□ -0.13
LINC01872-202ENST00000595566 SYNJ1O43426 1573 aa14.25□□□□□ -0.13
LINC01872-202ENST00000595566 LMTK3Q96Q04 1460 aa14.25□□□□□ -0.13
LINC01872-202ENST00000595566 ERCC6L2Q5T890 1561 aa14.24□□□□□ -0.13
LINC01872-202ENST00000595566 KIF13AQ9H1H9 1805 aa14.23□□□□□ -0.13
LINC01872-202ENST00000595566 TARBP1Q13395 1621 aaKnown RBP14.22□□□□□ -0.13
LINC01872-202ENST00000595566 HECW2Q9P2P5 1572 aa14.21□□□□□ -0.14
LINC01872-202ENST00000595566 SNAPC4Q5SXM2 1469 aa14.19□□□□□ -0.14
LINC01872-202ENST00000595566 SOCS7O14512 581 aa14.17□□□□□ -0.14
LINC01872-202ENST00000595566 TDRD9Q8NDG6 1382 aaKnown RBP14.17□□□□□ -0.14
LINC01872-202ENST00000595566 ABCC8Q09428 1581 aa14.15□□□□□ -0.14
LINC01872-202ENST00000595566 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
LINC01872-202ENST00000595566 FAM69CQ0P6D2 419 aa14.14□□□□□ -0.15
LINC01872-202ENST00000595566 ILDR2Q71H61 639 aa14.13□□□□□ -0.15
LINC01872-202ENST00000595566 DNMBPQ6XZF7 1577 aa14.12□□□□□ -0.15
LINC01872-202ENST00000595566 KDM6BO15054 1643 aa14.11□□□□□ -0.15
LINC01872-202ENST00000595566 RAD54L2Q9Y4B4 1467 aa14.1□□□□□ -0.15
LINC01872-202ENST00000595566 ADGRL1O94910 1474 aa14.08□□□□□ -0.16
LINC01872-202ENST00000595566 POLA1P09884 1462 aaPredicted RBP14.08□□□□□ -0.16
LINC01872-202ENST00000595566 MAGI1Q96QZ7 1491 aaPredicted RBP14.07□□□□□ -0.16
LINC01872-202ENST00000595566 SYNJ2O15056 1496 aa14.06□□□□□ -0.16
LINC01872-202ENST00000595566 SOGA1O94964 1423 aa14.03□□□□□ -0.16
LINC01872-202ENST00000595566 ABCC10Q5T3U5 1492 aa14.03□□□□□ -0.16
LINC01872-202ENST00000595566 TOP2AP11388 1531 aaKnown RBP13.99□□□□□ -0.17
LINC01872-202ENST00000595566 GRIN2BQ13224 1484 aa13.99□□□□□ -0.17
LINC01872-202ENST00000595566 DISP3Q9P2K9 1392 aa13.98□□□□□ -0.17
LINC01872-202ENST00000595566 TSPOAP1O95153 1857 aa13.95□□□□□ -0.18
LINC01872-202ENST00000595566 CEP170Q5SW79 1584 aa13.95□□□□□ -0.18
LINC01872-202ENST00000595566 DIP2BQ9P265 1576 aa13.95□□□□□ -0.18
LINC01872-202ENST00000595566 WDR97A6NE52 1622 aa13.93□□□□□ -0.18
LINC01872-202ENST00000595566 NPM1P06748 294 aaKnown RBP eCLIP13.92□□□□□ -0.18
LINC01872-202ENST00000595566 CCDC88BA6NC98 1476 aa13.9□□□□□ -0.18
LINC01872-202ENST00000595566 MAPKBP1O60336 1514 aa13.87□□□□□ -0.19
LINC01872-202ENST00000595566 FGD5Q6ZNL6 1462 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms