RNA–Protein interactions for RNA: ENST00000594513.1

ARHGEF1-209, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 325 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-209ENST00000594513 NISCHQ9Y2I1 1504 aa27.55■■■□□ 2
ARHGEF1-209ENST00000594513 CCDC180Q9P1Z9 1646 aa24.29■■□□□ 1.48
ARHGEF1-209ENST00000594513 ABCC9O60706 1549 aa23.69■■□□□ 1.38
ARHGEF1-209ENST00000594513 DCAF8L2P0C7V8 631 aa23.12■■□□□ 1.29
ARHGEF1-209ENST00000594513 ZCCHC6Q5VYS8 1495 aaKnown RBP22.99■■□□□ 1.27
ARHGEF1-209ENST00000594513 NACADO15069 1562 aa22.8■■□□□ 1.24
ARHGEF1-209ENST00000594513 RB1CC1Q8TDY2 1594 aa22.79■■□□□ 1.24
ARHGEF1-209ENST00000594513 AEBP2Q6ZN18 517 aaPredicted RBP22.74■■□□□ 1.23
ARHGEF1-209ENST00000594513 DCAF1Q9Y4B6 1507 aa22.72■■□□□ 1.23
ARHGEF1-209ENST00000594513 MYO15BQ96JP2 1530 aa22.68■■□□□ 1.22
ARHGEF1-209ENST00000594513 SCRIBQ14160 1630 aa22.34■■□□□ 1.17
ARHGEF1-209ENST00000594513 UNC13AQ9UPW8 1703 aa22.29■■□□□ 1.16
ARHGEF1-209ENST00000594513 PABPN1Q86U42 306 aaKnown RBP eCLIP22.25■■□□□ 1.15
ARHGEF1-209ENST00000594513 SHROOM4Q9ULL8 1493 aa22.13■■□□□ 1.13
ARHGEF1-209ENST00000594513 BICRAQ9NZM4 1560 aa22.12■■□□□ 1.13
ARHGEF1-209ENST00000594513 DNAJC5BQ9UF47 199 aa21.54■■□□□ 1.04
ARHGEF1-209ENST00000594513 EIF4G1Q04637 1599 aaKnown RBP21.51■■□□□ 1.03
ARHGEF1-209ENST00000594513 CECR2Q9BXF3 1484 aa21.51■■□□□ 1.03
ARHGEF1-209ENST00000594513 CHIC1Q5VXU3 224 aa21.49■■□□□ 1.03
ARHGEF1-209ENST00000594513 CC2D2AQ9P2K1 1620 aa21.38■■□□□ 1.01
ARHGEF1-209ENST00000594513 SMARCA4P51532 1647 aa21.32■■□□□ 1
ARHGEF1-209ENST00000594513 BAZ1AQ9NRL2 1556 aaPredicted RBP21.31■■□□□ 1
ARHGEF1-209ENST00000594513 MROH2BQ7Z745 1585 aa21.28■■□□□ 1
ARHGEF1-209ENST00000594513 ATAD2BQ9ULI0 1458 aa21.15■□□□□ 0.98
ARHGEF1-209ENST00000594513 RSF1Q96T23 1441 aaPredicted RBP21.12■□□□□ 0.97
ARHGEF1-209ENST00000594513 SMARCA2P51531 1590 aa21.1■□□□□ 0.97
ARHGEF1-209ENST00000594513 WIZO95785 1651 aa21.08■□□□□ 0.96
ARHGEF1-209ENST00000594513 NCAPD3P42695 1498 aa21.06■□□□□ 0.96
ARHGEF1-209ENST00000594513 PEG3Q9GZU2 1588 aa21.03■□□□□ 0.96
ARHGEF1-209ENST00000594513 BAZ1BQ9UIG0 1483 aaKnown RBP21.01■□□□□ 0.95
ARHGEF1-209ENST00000594513 HMGXB3Q12766 1538 aa20.95■□□□□ 0.94
ARHGEF1-209ENST00000594513 SUPT5HO00267 1087 aaKnown RBP20.95■□□□□ 0.94
ARHGEF1-209ENST00000594513 TOP2AP11388 1531 aaKnown RBP20.81■□□□□ 0.92
ARHGEF1-209ENST00000594513 CCDC88BA6NC98 1476 aa20.62■□□□□ 0.89
ARHGEF1-209ENST00000594513 NESP48681 1621 aa20.58■□□□□ 0.89
ARHGEF1-209ENST00000594513 CADPSQ9ULU8 1353 aa20.5■□□□□ 0.87
ARHGEF1-209ENST00000594513 LAMC3Q9Y6N6 1575 aa20.45■□□□□ 0.86
ARHGEF1-209ENST00000594513 CFTRP13569 1480 aa20.41■□□□□ 0.86
ARHGEF1-209ENST00000594513 ERCC6Q03468 1493 aa20.37■□□□□ 0.85
ARHGEF1-209ENST00000594513 PDS5BQ9NTI5 1447 aa20.35■□□□□ 0.85
ARHGEF1-209ENST00000594513 KIF21AQ7Z4S6 1674 aa20.29■□□□□ 0.84
ARHGEF1-209ENST00000594513 FANCD2Q9BXW9 1451 aa20.28■□□□□ 0.84
ARHGEF1-209ENST00000594513 PRDM2Q13029 1718 aa20.22■□□□□ 0.83
ARHGEF1-209ENST00000594513 CEP164Q9UPV0 1460 aa20.22■□□□□ 0.83
ARHGEF1-209ENST00000594513 THOC2Q8NI27 1593 aaKnown RBP20.12■□□□□ 0.81
ARHGEF1-209ENST00000594513 MRC2Q9UBG0 1479 aa20.12■□□□□ 0.81
ARHGEF1-209ENST00000594513 URB2Q14146 1524 aaKnown RBP20.07■□□□□ 0.8
ARHGEF1-209ENST00000594513 WDR62O43379 1518 aa20.02■□□□□ 0.79
ARHGEF1-209ENST00000594513 ABCC8Q09428 1581 aa19.99■□□□□ 0.79
ARHGEF1-209ENST00000594513 TOPBP1Q92547 1522 aa19.98■□□□□ 0.79
ARHGEF1-209ENST00000594513 CUX2O14529 1486 aa19.97■□□□□ 0.79
ARHGEF1-209ENST00000594513 DNMBPQ6XZF7 1577 aa19.95■□□□□ 0.78
ARHGEF1-209ENST00000594513 CUX1P39880 1505 aa19.95■□□□□ 0.78
ARHGEF1-209ENST00000594513 WRNQ14191 1432 aaPredicted RBP eCLIP19.92■□□□□ 0.78
ARHGEF1-209ENST00000594513 SYNJ1O43426 1573 aa19.86■□□□□ 0.77
ARHGEF1-209ENST00000594513 FGD5Q6ZNL6 1462 aa19.84■□□□□ 0.77
ARHGEF1-209ENST00000594513 POLA1P09884 1462 aaPredicted RBP19.83■□□□□ 0.76
ARHGEF1-209ENST00000594513 RAD54L2Q9Y4B4 1467 aa19.8■□□□□ 0.76
ARHGEF1-209ENST00000594513 TOP2BQ02880 1626 aa19.8■□□□□ 0.76
ARHGEF1-209ENST00000594513 SOGA1O94964 1423 aa19.78■□□□□ 0.76
ARHGEF1-209ENST00000594513 BIVM-ERCC5R4GMW8 1640 aa19.78■□□□□ 0.76
ARHGEF1-209ENST00000594513 IFT140Q96RY7 1462 aa19.76■□□□□ 0.75
ARHGEF1-209ENST00000594513 ZNF608Q9ULD9 1512 aaPredicted RBP19.72■□□□□ 0.75
ARHGEF1-209ENST00000594513 TARBP1Q13395 1621 aaKnown RBP19.71■□□□□ 0.75
ARHGEF1-209ENST00000594513 TRIM41Q8WV44 630 aa19.7■□□□□ 0.74
ARHGEF1-209ENST00000594513 TDRD9Q8NDG6 1382 aaKnown RBP19.68■□□□□ 0.74
ARHGEF1-209ENST00000594513 AQRO60306 1485 aaKnown RBP eCLIP19.66■□□□□ 0.74
ARHGEF1-209ENST00000594513 ABCA10Q8WWZ4 1543 aa19.61■□□□□ 0.73
ARHGEF1-209ENST00000594513 EIF4G3O43432 1585 aaKnown RBP19.6■□□□□ 0.73
ARHGEF1-209ENST00000594513 WDR97A6NE52 1622 aa19.59■□□□□ 0.73
ARHGEF1-209ENST00000594513 GAPVD1Q14C86 1478 aa19.54■□□□□ 0.72
ARHGEF1-209ENST00000594513 ABCA5Q8WWZ7 1642 aa19.51■□□□□ 0.71
ARHGEF1-209ENST00000594513 GRIN2BQ13224 1484 aa19.48■□□□□ 0.71
ARHGEF1-209ENST00000594513 KIF27Q86VH2 1401 aa19.46■□□□□ 0.71
ARHGEF1-209ENST00000594513 SNAPC4Q5SXM2 1469 aa19.46■□□□□ 0.71
ARHGEF1-209ENST00000594513 PBRM1Q86U86 1689 aa19.46■□□□□ 0.71
ARHGEF1-209ENST00000594513 RUSC2Q8N2Y8 1516 aa19.46■□□□□ 0.71
ARHGEF1-209ENST00000594513 FBLN2P98095 1184 aa19.44■□□□□ 0.7
ARHGEF1-209ENST00000594513 FAM9AQ8IZU1 332 aaPredicted RBP19.39■□□□□ 0.69
ARHGEF1-209ENST00000594513 MAGI1Q96QZ7 1491 aaPredicted RBP19.37■□□□□ 0.69
ARHGEF1-209ENST00000594513 IGF1RP08069 1367 aa19.37■□□□□ 0.69
ARHGEF1-209ENST00000594513 ERICH3Q5RHP9 1530 aa19.36■□□□□ 0.69
ARHGEF1-209ENST00000594513 CHMP7Q8WUX9 453 aaPredicted RBP19.36■□□□□ 0.69
ARHGEF1-209ENST00000594513 ADAMTS12P58397 1594 aa19.32■□□□□ 0.68
ARHGEF1-209ENST00000594513 CHD1O14646 1710 aa19.31■□□□□ 0.68
ARHGEF1-209ENST00000594513 SYNJ2O15056 1496 aa19.31■□□□□ 0.68
ARHGEF1-209ENST00000594513 FHAD1B1AJZ9 1412 aa19.3■□□□□ 0.68
ARHGEF1-209ENST00000594513 OSCARQ8IYS5 282 aa19.28■□□□□ 0.68
ARHGEF1-209ENST00000594513 CARMIL1Q5VZK9 1371 aa19.28■□□□□ 0.68
ARHGEF1-209ENST00000594513 CSRNP3Q8WYN3 585 aa19.25■□□□□ 0.67
ARHGEF1-209ENST00000594513 SENP3Q9H4L4 574 aaPredicted RBP19.25■□□□□ 0.67
ARHGEF1-209ENST00000594513 CUL7Q14999 1698 aa19.24■□□□□ 0.67
ARHGEF1-209ENST00000594513 GRIN2AQ12879 1464 aa19.22■□□□□ 0.67
ARHGEF1-209ENST00000594513 EEA1Q15075 1411 aa19.22■□□□□ 0.67
ARHGEF1-209ENST00000594513 EHMT2Q96KQ7 1210 aa19.21■□□□□ 0.67
ARHGEF1-209ENST00000594513 RAPGEF2Q9Y4G8 1499 aa19.16■□□□□ 0.66
ARHGEF1-209ENST00000594513 PRXQ9BXM0 1461 aa19.15■□□□□ 0.66
ARHGEF1-209ENST00000594513 CEP170Q5SW79 1584 aa19.14■□□□□ 0.65
ARHGEF1-209ENST00000594513 NUP160Q12769 1436 aa19.11■□□□□ 0.65
ARHGEF1-209ENST00000594513 DNAJC5Q9H3Z4 198 aa19.11■□□□□ 0.65
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