RNA–Protein interactions for RNA: ENST00000594264.1

USF2-206, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 2

Gene USF2, Length 2,742 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-206ENST00000594264 NISCHQ9Y2I1 1504 aa31.4■■■□□ 2.62
USF2-206ENST00000594264 SHROOM4Q9ULL8 1493 aa26.85■■□□□ 1.89
USF2-206ENST00000594264 CCDC180Q9P1Z9 1646 aa26.74■■□□□ 1.87
USF2-206ENST00000594264 DCAF8L2P0C7V8 631 aa26.63■■□□□ 1.85
USF2-206ENST00000594264 ZCCHC6Q5VYS8 1495 aaKnown RBP26.45■■□□□ 1.82
USF2-206ENST00000594264 SUPT5HO00267 1087 aaKnown RBP26.04■■□□□ 1.76
USF2-206ENST00000594264 ABCC9O60706 1549 aa25.63■■□□□ 1.69
USF2-206ENST00000594264 DCAF1Q9Y4B6 1507 aa25.54■■□□□ 1.68
USF2-206ENST00000594264 SCRIBQ14160 1630 aa25.33■■□□□ 1.65
USF2-206ENST00000594264 MYO15BQ96JP2 1530 aa24.94■■□□□ 1.58
USF2-206ENST00000594264 NACADO15069 1562 aa24.9■■□□□ 1.58
USF2-206ENST00000594264 CHIC1Q5VXU3 224 aa24.88■■□□□ 1.57
USF2-206ENST00000594264 RSF1Q96T23 1441 aaPredicted RBP24.74■■□□□ 1.55
USF2-206ENST00000594264 CECR2Q9BXF3 1484 aa24.72■■□□□ 1.55
USF2-206ENST00000594264 RB1CC1Q8TDY2 1594 aa24.67■■□□□ 1.54
USF2-206ENST00000594264 PABPN1Q86U42 306 aaKnown RBP eCLIP24.52■■□□□ 1.528e-7■□□□□ 11.1
USF2-206ENST00000594264 MROH2BQ7Z745 1585 aa24.51■■□□□ 1.51
USF2-206ENST00000594264 WIZO95785 1651 aa24.36■■□□□ 1.49
USF2-206ENST00000594264 UNC13AQ9UPW8 1703 aa24.35■■□□□ 1.49
USF2-206ENST00000594264 LOC105371045A0A1W2PR82 267 aa24.31■■□□□ 1.48
USF2-206ENST00000594264 EHMT2Q96KQ7 1210 aa24.17■■□□□ 1.46
USF2-206ENST00000594264 FAM9AQ8IZU1 332 aaPredicted RBP24.17■■□□□ 1.46
USF2-206ENST00000594264 TRIM41Q8WV44 630 aa24.13■■□□□ 1.45
USF2-206ENST00000594264 BAZ1AQ9NRL2 1556 aaPredicted RBP24.11■■□□□ 1.45
USF2-206ENST00000594264 BICRAQ9NZM4 1560 aa24.1■■□□□ 1.45
USF2-206ENST00000594264 SMARCA4P51532 1647 aa24.02■■□□□ 1.44
USF2-206ENST00000594264 TOP2AP11388 1531 aaKnown RBP23.82■■□□□ 1.4
USF2-206ENST00000594264 CCDC88BA6NC98 1476 aa23.82■■□□□ 1.4
USF2-206ENST00000594264 PCGF6Q9BYE7 350 aa23.74■■□□□ 1.39
USF2-206ENST00000594264 SMARCA2P51531 1590 aa23.73■■□□□ 1.39
USF2-206ENST00000594264 PELP1Q8IZL8 1130 aaKnown RBP23.73■■□□□ 1.39
USF2-206ENST00000594264 ABCC8Q09428 1581 aa23.72■■□□□ 1.39
USF2-206ENST00000594264 EIF4G1Q04637 1599 aaKnown RBP23.65■■□□□ 1.38
USF2-206ENST00000594264 ATAD2BQ9ULI0 1458 aa23.57■■□□□ 1.36
USF2-206ENST00000594264 BAZ1BQ9UIG0 1483 aaKnown RBP23.5■■□□□ 1.35
USF2-206ENST00000594264 PEG3Q9GZU2 1588 aa23.44■■□□□ 1.34
USF2-206ENST00000594264 PPARGC1BQ86YN6 1023 aaKnown RBP23.42■■□□□ 1.34
USF2-206ENST00000594264 SOGA1O94964 1423 aa23.39■■□□□ 1.33
USF2-206ENST00000594264 RUSC2Q8N2Y8 1516 aa23.34■■□□□ 1.33
USF2-206ENST00000594264 HRCP23327 699 aa23.26■■□□□ 1.31
USF2-206ENST00000594264 WRNQ14191 1432 aaPredicted RBP eCLIP23.25■■□□□ 1.31
USF2-206ENST00000594264 TTBK1Q5TCY1 1321 aaPredicted RBP23.21■■□□□ 1.31
USF2-206ENST00000594264 SYNJ1O43426 1573 aa23.18■■□□□ 1.3
USF2-206ENST00000594264 TRIM26Q12899 539 aaPredicted RBP23.17■■□□□ 1.3
USF2-206ENST00000594264 MYT1Q01538 1121 aa23.14■■□□□ 1.29
USF2-206ENST00000594264 UBTFP17480 764 aaKnown RBP23.12■■□□□ 1.29
USF2-206ENST00000594264 CSRNP3Q8WYN3 585 aa23.11■■□□□ 1.29
USF2-206ENST00000594264 NCAPD3P42695 1498 aa23.11■■□□□ 1.29
USF2-206ENST00000594264 RANGAP1P46060 587 aaPredicted RBP23.08■■□□□ 1.28
USF2-206ENST00000594264 HMGXB3Q12766 1538 aa23.01■■□□□ 1.27
USF2-206ENST00000594264 CEP162Q5TB80 1403 aa22.96■■□□□ 1.27
USF2-206ENST00000594264 CC2D2AQ9P2K1 1620 aa22.93■■□□□ 1.26
USF2-206ENST00000594264 DNAJC5BQ9UF47 199 aa22.85■■□□□ 1.25
USF2-206ENST00000594264 EEA1Q15075 1411 aa22.85■■□□□ 1.25
USF2-206ENST00000594264 TNIKQ9UKE5 1360 aa22.84■■□□□ 1.25
USF2-206ENST00000594264 CFTRP13569 1480 aa22.83■■□□□ 1.24
USF2-206ENST00000594264 GOLGA3Q08378 1498 aa22.83■■□□□ 1.24
USF2-206ENST00000594264 CUX1P39880 1505 aa22.82■■□□□ 1.24
USF2-206ENST00000594264 TOP2BQ02880 1626 aa22.81■■□□□ 1.24
USF2-206ENST00000594264 RAPGEF2Q9Y4G8 1499 aa22.8■■□□□ 1.24
USF2-206ENST00000594264 CEP164Q9UPV0 1460 aa22.73■■□□□ 1.23
USF2-206ENST00000594264 CADPSQ9ULU8 1353 aa22.72■■□□□ 1.23
USF2-206ENST00000594264 NESP48681 1621 aa22.7■■□□□ 1.22
USF2-206ENST00000594264 BIVM-ERCC5R4GMW8 1640 aa22.69■■□□□ 1.22
USF2-206ENST00000594264 CLIP1P30622 1438 aa22.63■■□□□ 1.21
USF2-206ENST00000594264 KIF21BO75037 1637 aa22.63■■□□□ 1.21
USF2-206ENST00000594264 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.62■■□□□ 1.21
USF2-206ENST00000594264 FANCD2Q9BXW9 1451 aa22.54■■□□□ 1.2
USF2-206ENST00000594264 CUX2O14529 1486 aa22.53■■□□□ 1.2
USF2-206ENST00000594264 KIF27Q86VH2 1401 aa22.53■■□□□ 1.2
USF2-206ENST00000594264 FGD5Q6ZNL6 1462 aa22.51■■□□□ 1.19
USF2-206ENST00000594264 PRXQ9BXM0 1461 aa22.49■■□□□ 1.19
USF2-206ENST00000594264 RAD54L2Q9Y4B4 1467 aa22.45■■□□□ 1.18
USF2-206ENST00000594264 PRDM2Q13029 1718 aa22.45■■□□□ 1.18
USF2-206ENST00000594264 CCER1Q8TC90 406 aaPredicted RBP22.41■■□□□ 1.18
USF2-206ENST00000594264 VPS8Q8N3P4 1428 aa22.4■■□□□ 1.18
USF2-206ENST00000594264 HNRNPUL2Q1KMD3 747 aaKnown RBP22.39■■□□□ 1.17
USF2-206ENST00000594264 IGF1RP08069 1367 aa22.39■■□□□ 1.17
USF2-206ENST00000594264 APLP2Q06481 763 aa22.37■■□□□ 1.17
USF2-206ENST00000594264 ERICH3Q5RHP9 1530 aa22.33■■□□□ 1.17
USF2-206ENST00000594264 P3H3Q8IVL6 736 aa22.32■■□□□ 1.16
USF2-206ENST00000594264 ARAP1Q96P48 1450 aa22.32■■□□□ 1.16
USF2-206ENST00000594264 TOPBP1Q92547 1522 aa22.31■■□□□ 1.16
USF2-206ENST00000594264 POLA1P09884 1462 aaPredicted RBP22.31■■□□□ 1.16
USF2-206ENST00000594264 CARMIL1Q5VZK9 1371 aa22.3■■□□□ 1.16
USF2-206ENST00000594264 KANK4Q5T7N3 995 aaPredicted RBP22.29■■□□□ 1.16
USF2-206ENST00000594264 URB2Q14146 1524 aaKnown RBP22.26■■□□□ 1.15
USF2-206ENST00000594264 ZEB1P37275 1124 aaPredicted RBP22.25■■□□□ 1.15
USF2-206ENST00000594264 SCAF1Q9H7N4 1312 aaKnown RBP22.25■■□□□ 1.15
USF2-206ENST00000594264 TDRD9Q8NDG6 1382 aaKnown RBP22.24■■□□□ 1.15
USF2-206ENST00000594264 DNMBPQ6XZF7 1577 aa22.24■■□□□ 1.15
USF2-206ENST00000594264 ARHGAP35Q9NRY4 1499 aa22.21■■□□□ 1.15
USF2-206ENST00000594264 ATP1B4Q9UN42 357 aaPredicted RBP22.18■■□□□ 1.14
USF2-206ENST00000594264 LAMC3Q9Y6N6 1575 aa22.17■■□□□ 1.14
USF2-206ENST00000594264 KIF21AQ7Z4S6 1674 aa22.15■■□□□ 1.14
USF2-206ENST00000594264 PDS5BQ9NTI5 1447 aa22.12■■□□□ 1.13
USF2-206ENST00000594264 ABCA10Q8WWZ4 1543 aa22.11■■□□□ 1.13
USF2-206ENST00000594264 ITGAEP38570 1179 aa22.08■■□□□ 1.13
USF2-206ENST00000594264 FHOD3Q2V2M9 1422 aa22.03■■□□□ 1.12
USF2-206ENST00000594264 GAPVD1Q14C86 1478 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms