RNA–Protein interactions for RNA: ENST00000594163.1

C19orf54-204, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 519 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-204ENST00000594163 NISCHQ9Y2I1 1504 aa16.61■□□□□ 0.25
C19orf54-204ENST00000594163 CHIC1Q5VXU3 224 aa15.71■□□□□ 0.11
C19orf54-204ENST00000594163 AEBP2Q6ZN18 517 aaPredicted RBP15.56■□□□□ 0.08
C19orf54-204ENST00000594163 CCDC180Q9P1Z9 1646 aa14.92□□□□□ -0.02
C19orf54-204ENST00000594163 ABCC9O60706 1549 aa14.88□□□□□ -0.03
C19orf54-204ENST00000594163 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
C19orf54-204ENST00000594163 DNAJC5Q9H3Z4 198 aa14.18□□□□□ -0.14
C19orf54-204ENST00000594163 RB1CC1Q8TDY2 1594 aa14.03□□□□□ -0.16
C19orf54-204ENST00000594163 NACADO15069 1562 aa13.96□□□□□ -0.17
C19orf54-204ENST00000594163 UNC13AQ9UPW8 1703 aa13.92□□□□□ -0.18
C19orf54-204ENST00000594163 PHF23Q9BUL5 403 aaPredicted RBP13.9□□□□□ -0.18
C19orf54-204ENST00000594163 ZCCHC6Q5VYS8 1495 aaKnown RBP13.83□□□□□ -0.2
C19orf54-204ENST00000594163 DCAF8L2P0C7V8 631 aa13.81□□□□□ -0.2
C19orf54-204ENST00000594163 MYO15BQ96JP2 1530 aa13.8□□□□□ -0.2
C19orf54-204ENST00000594163 PABPN1Q86U42 306 aaKnown RBP eCLIP13.78□□□□□ -0.2
C19orf54-204ENST00000594163 DCAF1Q9Y4B6 1507 aa13.72□□□□□ -0.21
C19orf54-204ENST00000594163 BICRAQ9NZM4 1560 aa13.68□□□□□ -0.22
C19orf54-204ENST00000594163 SCRIBQ14160 1630 aa13.6□□□□□ -0.23
C19orf54-204ENST00000594163 CECR2Q9BXF3 1484 aa13.47□□□□□ -0.25
C19orf54-204ENST00000594163 SHROOM4Q9ULL8 1493 aa13.41□□□□□ -0.26
C19orf54-204ENST00000594163 CC2D2AQ9P2K1 1620 aa13.35□□□□□ -0.27
C19orf54-204ENST00000594163 EIF4G1Q04637 1599 aaKnown RBP13.29□□□□□ -0.28
C19orf54-204ENST00000594163 SLC24A1O60721 1099 aa13.27□□□□□ -0.29
C19orf54-204ENST00000594163 TRIM41Q8WV44 630 aa13.23□□□□□ -0.29
C19orf54-204ENST00000594163 CUX2O14529 1486 aa13.09□□□□□ -0.31
C19orf54-204ENST00000594163 SENP3Q9H4L4 574 aaPredicted RBP13.08□□□□□ -0.32
C19orf54-204ENST00000594163 PLPPR3Q6T4P5 718 aa12.98□□□□□ -0.33
C19orf54-204ENST00000594163 SMARCA4P51532 1647 aa12.98□□□□□ -0.33
C19orf54-204ENST00000594163 MYT1Q01538 1121 aa12.88□□□□□ -0.35
C19orf54-204ENST00000594163 BAZ1AQ9NRL2 1556 aaPredicted RBP12.88□□□□□ -0.35
C19orf54-204ENST00000594163 ATAD2BQ9ULI0 1458 aa12.86□□□□□ -0.35
C19orf54-204ENST00000594163 ERCC6Q03468 1493 aa12.85□□□□□ -0.35
C19orf54-204ENST00000594163 SMARCA2P51531 1590 aa12.85□□□□□ -0.35
C19orf54-204ENST00000594163 NCAPD3P42695 1498 aa12.85□□□□□ -0.35
C19orf54-204ENST00000594163 HMGXB3Q12766 1538 aa12.83□□□□□ -0.35
C19orf54-204ENST00000594163 MROH2BQ7Z745 1585 aa12.83□□□□□ -0.36
C19orf54-204ENST00000594163 PEG3Q9GZU2 1588 aa12.82□□□□□ -0.36
C19orf54-204ENST00000594163 BAZ1BQ9UIG0 1483 aaKnown RBP12.76□□□□□ -0.37
C19orf54-204ENST00000594163 TTBK1Q5TCY1 1321 aaPredicted RBP12.75□□□□□ -0.37
C19orf54-204ENST00000594163 WIZO95785 1651 aa12.74□□□□□ -0.37
C19orf54-204ENST00000594163 NESP48681 1621 aa12.66□□□□□ -0.38
C19orf54-204ENST00000594163 PELP1Q8IZL8 1130 aaKnown RBP12.66□□□□□ -0.38
C19orf54-204ENST00000594163 KIF21AQ7Z4S6 1674 aa12.61□□□□□ -0.39
C19orf54-204ENST00000594163 LAMC3Q9Y6N6 1575 aa12.59□□□□□ -0.39
C19orf54-204ENST00000594163 RSF1Q96T23 1441 aaPredicted RBP12.58□□□□□ -0.4
C19orf54-204ENST00000594163 THOC2Q8NI27 1593 aaKnown RBP12.56□□□□□ -0.4
C19orf54-204ENST00000594163 TOP2AP11388 1531 aaKnown RBP12.54□□□□□ -0.4
C19orf54-204ENST00000594163 PRDM2Q13029 1718 aa12.48□□□□□ -0.41
C19orf54-204ENST00000594163 CADPSQ9ULU8 1353 aa12.44□□□□□ -0.42
C19orf54-204ENST00000594163 OSCARQ8IYS5 282 aa12.42□□□□□ -0.42
C19orf54-204ENST00000594163 PDS5BQ9NTI5 1447 aa12.42□□□□□ -0.42
C19orf54-204ENST00000594163 DAXXQ9UER7 740 aaPredicted RBP12.39□□□□□ -0.43
C19orf54-204ENST00000594163 CFTRP13569 1480 aa12.38□□□□□ -0.43
C19orf54-204ENST00000594163 WDR62O43379 1518 aa12.37□□□□□ -0.43
C19orf54-204ENST00000594163 TRHP20396 242 aaPredicted RBP12.37□□□□□ -0.43
C19orf54-204ENST00000594163 MRC2Q9UBG0 1479 aa12.36□□□□□ -0.43
C19orf54-204ENST00000594163 CCDC88BA6NC98 1476 aa12.35□□□□□ -0.43
C19orf54-204ENST00000594163 CEP164Q9UPV0 1460 aa12.35□□□□□ -0.43
C19orf54-204ENST00000594163 FANCD2Q9BXW9 1451 aa12.34□□□□□ -0.43
C19orf54-204ENST00000594163 RIMBP3CA6NJZ7 1639 aa12.33□□□□□ -0.43
C19orf54-204ENST00000594163 RIMBP3BA6NNM3 1639 aa12.33□□□□□ -0.43
C19orf54-204ENST00000594163 RIMBP3Q9UFD9 1639 aa12.33□□□□□ -0.43
C19orf54-204ENST00000594163 ILDR1Q86SU0 546 aaPredicted RBP12.31□□□□□ -0.44
C19orf54-204ENST00000594163 URB2Q14146 1524 aaKnown RBP12.27□□□□□ -0.44
C19orf54-204ENST00000594163 CYB5RLQ6IPT4 315 aa12.24□□□□□ -0.45
C19orf54-204ENST00000594163 ARHGEF11O15085 1522 aa12.21□□□□□ -0.46
C19orf54-204ENST00000594163 ERICH6Q7L0X2 663 aa12.2□□□□□ -0.46
C19orf54-204ENST00000594163 ADRA2BP18089 450 aa12.18□□□□□ -0.46
C19orf54-204ENST00000594163 TOPBP1Q92547 1522 aa12.16□□□□□ -0.46
C19orf54-204ENST00000594163 APLP2Q06481 763 aa12.16□□□□□ -0.46
C19orf54-204ENST00000594163 DNMBPQ6XZF7 1577 aa12.16□□□□□ -0.46
C19orf54-204ENST00000594163 SUPT5HO00267 1087 aaKnown RBP12.1□□□□□ -0.47
C19orf54-204ENST00000594163 FOXD1Q16676 465 aa12.1□□□□□ -0.47
C19orf54-204ENST00000594163 TARBP1Q13395 1621 aaKnown RBP12.1□□□□□ -0.47
C19orf54-204ENST00000594163 EIF4G3O43432 1585 aaKnown RBP12.09□□□□□ -0.47
C19orf54-204ENST00000594163 PPP6R1Q9UPN7 881 aa12.09□□□□□ -0.47
C19orf54-204ENST00000594163 ZNF608Q9ULD9 1512 aaPredicted RBP12.09□□□□□ -0.47
C19orf54-204ENST00000594163 ABCC8Q09428 1581 aa12.08□□□□□ -0.48
C19orf54-204ENST00000594163 IFT140Q96RY7 1462 aa12.08□□□□□ -0.48
C19orf54-204ENST00000594163 POLA1P09884 1462 aaPredicted RBP12.05□□□□□ -0.48
C19orf54-204ENST00000594163 CUX1P39880 1505 aa12.05□□□□□ -0.48
C19orf54-204ENST00000594163 ARAP1Q96P48 1450 aa12.04□□□□□ -0.48
C19orf54-204ENST00000594163 WDR97A6NE52 1622 aa12.04□□□□□ -0.48
C19orf54-204ENST00000594163 CHD1O14646 1710 aa12.03□□□□□ -0.48
C19orf54-204ENST00000594163 FGD5Q6ZNL6 1462 aa12.01□□□□□ -0.49
C19orf54-204ENST00000594163 RAD54L2Q9Y4B4 1467 aa12□□□□□ -0.49
C19orf54-204ENST00000594163 PRKCSHP14314 528 aaPredicted RBP11.98□□□□□ -0.49
C19orf54-204ENST00000594163 PBRM1Q86U86 1689 aa11.97□□□□□ -0.49
C19orf54-204ENST00000594163 AQRO60306 1485 aaKnown RBP eCLIP11.96□□□□□ -0.49
C19orf54-204ENST00000594163 BIVM-ERCC5R4GMW8 1640 aa11.96□□□□□ -0.5
C19orf54-204ENST00000594163 SYNJ1O43426 1573 aa11.94□□□□□ -0.5
C19orf54-204ENST00000594163 SOGA1O94964 1423 aa11.93□□□□□ -0.5
C19orf54-204ENST00000594163 TOP2BQ02880 1626 aa11.92□□□□□ -0.5
C19orf54-204ENST00000594163 ABCA5Q8WWZ7 1642 aa11.91□□□□□ -0.5
C19orf54-204ENST00000594163 TDRD9Q8NDG6 1382 aaKnown RBP11.9□□□□□ -0.5
C19orf54-204ENST00000594163 KCNA4P22459 653 aa11.88□□□□□ -0.51
C19orf54-204ENST00000594163 SNAPC4Q5SXM2 1469 aa11.88□□□□□ -0.51
C19orf54-204ENST00000594163 ABCA10Q8WWZ4 1543 aa11.86□□□□□ -0.51
C19orf54-204ENST00000594163 NCBP3Q53F19 620 aaKnown RBP11.86□□□□□ -0.51
C19orf54-204ENST00000594163 WRNQ14191 1432 aaPredicted RBP eCLIP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms