RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 NISCHQ9Y2I1 1504 aa30.98■■■□□ 2.55
ZNF558-202ENST00000593891 ABCC9O60706 1549 aa29.84■■■□□ 2.37
ZNF558-202ENST00000593891 DNAJC5BQ9UF47 199 aa29.29■■■□□ 2.28
ZNF558-202ENST00000593891 CCDC180Q9P1Z9 1646 aa28.31■■■□□ 2.12
ZNF558-202ENST00000593891 DNAJC5Q9H3Z4 198 aa28.02■■■□□ 2.08
ZNF558-202ENST00000593891 RB1CC1Q8TDY2 1594 aa27.75■■■□□ 2.03
ZNF558-202ENST00000593891 PABPN1Q86U42 306 aaKnown RBP eCLIP27.65■■■□□ 2.02
ZNF558-202ENST00000593891 NACADO15069 1562 aa27.22■■□□□ 1.95
ZNF558-202ENST00000593891 CECR2Q9BXF3 1484 aa27.06■■□□□ 1.92
ZNF558-202ENST00000593891 DCAF8L2P0C7V8 631 aa27■■□□□ 1.91
ZNF558-202ENST00000593891 BICRAQ9NZM4 1560 aa26.9■■□□□ 1.9
ZNF558-202ENST00000593891 UNC13AQ9UPW8 1703 aa26.85■■□□□ 1.89
ZNF558-202ENST00000593891 CC2D2AQ9P2K1 1620 aa26.81■■□□□ 1.88
ZNF558-202ENST00000593891 SHROOM4Q9ULL8 1493 aa26.5■■□□□ 1.83
ZNF558-202ENST00000593891 EIF4G1Q04637 1599 aaKnown RBP26.41■■□□□ 1.82
ZNF558-202ENST00000593891 MYO15BQ96JP2 1530 aa26.37■■□□□ 1.81
ZNF558-202ENST00000593891 CUX2O14529 1486 aa26.32■■□□□ 1.8
ZNF558-202ENST00000593891 TRIM41Q8WV44 630 aa26.22■■□□□ 1.79
ZNF558-202ENST00000593891 ERCC6Q03468 1493 aa25.92■■□□□ 1.74
ZNF558-202ENST00000593891 SCRIBQ14160 1630 aa25.81■■□□□ 1.72
ZNF558-202ENST00000593891 DCAF1Q9Y4B6 1507 aa25.5■■□□□ 1.67
ZNF558-202ENST00000593891 ZCCHC6Q5VYS8 1495 aaKnown RBP25.34■■□□□ 1.65
ZNF558-202ENST00000593891 NCAPD3P42695 1498 aa25.2■■□□□ 1.62
ZNF558-202ENST00000593891 NESP48681 1621 aa25.19■■□□□ 1.62
ZNF558-202ENST00000593891 THOC2Q8NI27 1593 aaKnown RBP25.13■■□□□ 1.61
ZNF558-202ENST00000593891 AEBP2Q6ZN18 517 aaPredicted RBP25.12■■□□□ 1.61
ZNF558-202ENST00000593891 OSCARQ8IYS5 282 aa25.02■■□□□ 1.6
ZNF558-202ENST00000593891 SMARCA2P51531 1590 aa24.93■■□□□ 1.58
ZNF558-202ENST00000593891 ATAD2BQ9ULI0 1458 aa24.89■■□□□ 1.57
ZNF558-202ENST00000593891 PDS5BQ9NTI5 1447 aa24.82■■□□□ 1.56
ZNF558-202ENST00000593891 BAZ1AQ9NRL2 1556 aaPredicted RBP24.8■■□□□ 1.56
ZNF558-202ENST00000593891 HMGXB3Q12766 1538 aa24.79■■□□□ 1.56
ZNF558-202ENST00000593891 LAMC3Q9Y6N6 1575 aa24.78■■□□□ 1.56
ZNF558-202ENST00000593891 TRHP20396 242 aaPredicted RBP24.74■■□□□ 1.55
ZNF558-202ENST00000593891 KIF21AQ7Z4S6 1674 aa24.68■■□□□ 1.54
ZNF558-202ENST00000593891 RIMBP3CA6NJZ7 1639 aa24.61■■□□□ 1.53
ZNF558-202ENST00000593891 RIMBP3BA6NNM3 1639 aa24.61■■□□□ 1.53
ZNF558-202ENST00000593891 RIMBP3Q9UFD9 1639 aa24.61■■□□□ 1.53
ZNF558-202ENST00000593891 MRC2Q9UBG0 1479 aa24.61■■□□□ 1.53
ZNF558-202ENST00000593891 BAZ1BQ9UIG0 1483 aaKnown RBP24.58■■□□□ 1.53
ZNF558-202ENST00000593891 WDR62O43379 1518 aa24.53■■□□□ 1.52
ZNF558-202ENST00000593891 CYB5RLQ6IPT4 315 aa24.51■■□□□ 1.51
ZNF558-202ENST00000593891 ARHGEF11O15085 1522 aa24.45■■□□□ 1.51
ZNF558-202ENST00000593891 SMARCA4P51532 1647 aa24.42■■□□□ 1.5
ZNF558-202ENST00000593891 CADPSQ9ULU8 1353 aa24.4■■□□□ 1.5
ZNF558-202ENST00000593891 CEP164Q9UPV0 1460 aa24.23■■□□□ 1.47
ZNF558-202ENST00000593891 ILDR1Q86SU0 546 aaPredicted RBP24.2■■□□□ 1.46
ZNF558-202ENST00000593891 PEG3Q9GZU2 1588 aa24.2■■□□□ 1.46
ZNF558-202ENST00000593891 ARAP1Q96P48 1450 aa24.1■■□□□ 1.45
ZNF558-202ENST00000593891 FANCD2Q9BXW9 1451 aa24.08■■□□□ 1.45
ZNF558-202ENST00000593891 URB2Q14146 1524 aaKnown RBP23.92■■□□□ 1.42
ZNF558-202ENST00000593891 RSF1Q96T23 1441 aaPredicted RBP23.91■■□□□ 1.42
ZNF558-202ENST00000593891 ZNF608Q9ULD9 1512 aaPredicted RBP23.87■■□□□ 1.41
ZNF558-202ENST00000593891 MROH2BQ7Z745 1585 aa23.84■■□□□ 1.41
ZNF558-202ENST00000593891 IFT140Q96RY7 1462 aa23.82■■□□□ 1.4
ZNF558-202ENST00000593891 FBLN2P98095 1184 aa23.79■■□□□ 1.4
ZNF558-202ENST00000593891 CFTRP13569 1480 aa23.76■■□□□ 1.39
ZNF558-202ENST00000593891 CHD1O14646 1710 aa23.61■■□□□ 1.37
ZNF558-202ENST00000593891 EIF4G3O43432 1585 aaKnown RBP23.59■■□□□ 1.37
ZNF558-202ENST00000593891 AQRO60306 1485 aaKnown RBP eCLIP23.53■■□□□ 1.363e-8■□□□□ 11.2
ZNF558-202ENST00000593891 TOPBP1Q92547 1522 aa23.43■■□□□ 1.34
ZNF558-202ENST00000593891 WIZO95785 1651 aa23.42■■□□□ 1.34
ZNF558-202ENST00000593891 KDM4FA0A1W2PPD8 638 aa23.42■■□□□ 1.34
ZNF558-202ENST00000593891 CLASP1Q7Z460 1538 aa23.4■■□□□ 1.34
ZNF558-202ENST00000593891 CHMP7Q8WUX9 453 aaPredicted RBP23.38■■□□□ 1.33
ZNF558-202ENST00000593891 GAPVD1Q14C86 1478 aa23.37■■□□□ 1.33
ZNF558-202ENST00000593891 ABCC8Q09428 1581 aa23.35■■□□□ 1.33
ZNF558-202ENST00000593891 SYNJ1O43426 1573 aa23.31■■□□□ 1.32
ZNF558-202ENST00000593891 TARBP1Q13395 1621 aaKnown RBP23.25■■□□□ 1.31
ZNF558-202ENST00000593891 SNAPC4Q5SXM2 1469 aa23.21■■□□□ 1.31
ZNF558-202ENST00000593891 TDRD9Q8NDG6 1382 aaKnown RBP23.2■■□□□ 1.3
ZNF558-202ENST00000593891 DNMBPQ6XZF7 1577 aa23.18■■□□□ 1.3
ZNF558-202ENST00000593891 FBXO41Q8TF61 875 aa23.15■■□□□ 1.3
ZNF558-202ENST00000593891 PRDM2Q13029 1718 aa23.15■■□□□ 1.3
ZNF558-202ENST00000593891 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
ZNF558-202ENST00000593891 POLA1P09884 1462 aaPredicted RBP23.1■■□□□ 1.29
ZNF558-202ENST00000593891 TOP2AP11388 1531 aaKnown RBP23.08■■□□□ 1.29
ZNF558-202ENST00000593891 SOGA1O94964 1423 aa23.07■■□□□ 1.28
ZNF558-202ENST00000593891 SYNJ2O15056 1496 aa23.06■■□□□ 1.28
ZNF558-202ENST00000593891 RAD54L2Q9Y4B4 1467 aa23.06■■□□□ 1.28
ZNF558-202ENST00000593891 FAM69CQ0P6D2 419 aa23.06■■□□□ 1.28
ZNF558-202ENST00000593891 ERCC6L2Q5T890 1561 aa23.06■■□□□ 1.28
ZNF558-202ENST00000593891 KIF13AQ9H1H9 1805 aa23.01■■□□□ 1.27
ZNF558-202ENST00000593891 GRIN2BQ13224 1484 aa22.99■■□□□ 1.27
ZNF558-202ENST00000593891 WDR97A6NE52 1622 aa22.96■■□□□ 1.27
ZNF558-202ENST00000593891 HECW2Q9P2P5 1572 aa22.93■■□□□ 1.26
ZNF558-202ENST00000593891 LMTK3Q96Q04 1460 aa22.93■■□□□ 1.26
ZNF558-202ENST00000593891 KDM6BO15054 1643 aa22.93■■□□□ 1.26
ZNF558-202ENST00000593891 ABCC10Q5T3U5 1492 aa22.91■■□□□ 1.26
ZNF558-202ENST00000593891 CCDC88BA6NC98 1476 aa22.9■■□□□ 1.26
ZNF558-202ENST00000593891 NPM1P06748 294 aaKnown RBP eCLIP22.87■■□□□ 1.25
ZNF558-202ENST00000593891 ADGRL1O94910 1474 aa22.84■■□□□ 1.25
ZNF558-202ENST00000593891 SOCS7O14512 581 aa22.82■■□□□ 1.24
ZNF558-202ENST00000593891 CEP170Q5SW79 1584 aa22.78■■□□□ 1.24
ZNF558-202ENST00000593891 FGD5Q6ZNL6 1462 aa22.76■■□□□ 1.23
ZNF558-202ENST00000593891 DIP2BQ9P265 1576 aa22.7■■□□□ 1.22
ZNF558-202ENST00000593891 MAPKBP1O60336 1514 aa22.68■■□□□ 1.22
ZNF558-202ENST00000593891 GRIN2AQ12879 1464 aa22.66■■□□□ 1.22
ZNF558-202ENST00000593891 NUP160Q12769 1436 aa22.63■■□□□ 1.21
ZNF558-202ENST00000593891 ILDR2Q71H61 639 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms