RNA–Protein interactions for RNA: ENST00000593568.1

LINC01515-202, Transcript of long intergenic non-protein coding RNA 1515, humanhuman

TSL 5

Gene LINC01515, Length 1,032 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01515-202ENST00000593568 AEBP2Q6ZN18 517 aaPredicted RBP27.7■■■□□ 2.02
LINC01515-202ENST00000593568 CHIC1Q5VXU3 224 aa26.77■■□□□ 1.88
LINC01515-202ENST00000593568 NISCHQ9Y2I1 1504 aa24.85■■□□□ 1.57
LINC01515-202ENST00000593568 SENP3Q9H4L4 574 aaPredicted RBP23.65■■□□□ 1.38
LINC01515-202ENST00000593568 PHF23Q9BUL5 403 aaPredicted RBP23.45■■□□□ 1.34
LINC01515-202ENST00000593568 ABCC9O60706 1549 aa23.21■■□□□ 1.31
LINC01515-202ENST00000593568 CCDC180Q9P1Z9 1646 aa22.54■■□□□ 1.2
LINC01515-202ENST00000593568 DNAJC5BQ9UF47 199 aa22.38■■□□□ 1.17
LINC01515-202ENST00000593568 FOXD1Q16676 465 aa21.92■■□□□ 1.1
LINC01515-202ENST00000593568 RB1CC1Q8TDY2 1594 aa21.74■■□□□ 1.07
LINC01515-202ENST00000593568 PLPPR3Q6T4P5 718 aa21.62■■□□□ 1.05
LINC01515-202ENST00000593568 PABPN1Q86U42 306 aaKnown RBP eCLIP21.54■■□□□ 1.04
LINC01515-202ENST00000593568 NACADO15069 1562 aa21.42■■□□□ 1.02
LINC01515-202ENST00000593568 UNC13AQ9UPW8 1703 aa21.41■■□□□ 1.02
LINC01515-202ENST00000593568 DCAF8L2P0C7V8 631 aa21.3■■□□□ 1
LINC01515-202ENST00000593568 BICRAQ9NZM4 1560 aa21.23■□□□□ 0.99
LINC01515-202ENST00000593568 CC2D2AQ9P2K1 1620 aa20.93■□□□□ 0.94
LINC01515-202ENST00000593568 CECR2Q9BXF3 1484 aa20.92■□□□□ 0.94
LINC01515-202ENST00000593568 DNAJC5Q9H3Z4 198 aa20.88■□□□□ 0.93
LINC01515-202ENST00000593568 MYO15BQ96JP2 1530 aa20.87■□□□□ 0.93
LINC01515-202ENST00000593568 PPP6R1Q9UPN7 881 aa20.79■□□□□ 0.92
LINC01515-202ENST00000593568 ADRA2BP18089 450 aa20.77■□□□□ 0.92
LINC01515-202ENST00000593568 EIF4G1Q04637 1599 aaKnown RBP20.7■□□□□ 0.9
LINC01515-202ENST00000593568 SHROOM4Q9ULL8 1493 aa20.67■□□□□ 0.9
LINC01515-202ENST00000593568 PIAS4Q8N2W9 510 aaPredicted RBP20.63■□□□□ 0.89
LINC01515-202ENST00000593568 SCRIBQ14160 1630 aa20.58■□□□□ 0.89
LINC01515-202ENST00000593568 ZCCHC6Q5VYS8 1495 aaKnown RBP20.44■□□□□ 0.86
LINC01515-202ENST00000593568 MSH5O43196 834 aa20.42■□□□□ 0.86
LINC01515-202ENST00000593568 DCAF1Q9Y4B6 1507 aa20.41■□□□□ 0.86
LINC01515-202ENST00000593568 CUX2O14529 1486 aa20.13■□□□□ 0.81
LINC01515-202ENST00000593568 ERCC6Q03468 1493 aa20.01■□□□□ 0.79
LINC01515-202ENST00000593568 NESP48681 1621 aa19.8■□□□□ 0.76
LINC01515-202ENST00000593568 NCAPD3P42695 1498 aa19.79■□□□□ 0.76
LINC01515-202ENST00000593568 TRIM41Q8WV44 630 aa19.77■□□□□ 0.76
LINC01515-202ENST00000593568 ATAD2BQ9ULI0 1458 aa19.68■□□□□ 0.74
LINC01515-202ENST00000593568 THOC2Q8NI27 1593 aaKnown RBP19.67■□□□□ 0.74
LINC01515-202ENST00000593568 HMGXB3Q12766 1538 aa19.58■□□□□ 0.73
LINC01515-202ENST00000593568 SMARCA2P51531 1590 aa19.55■□□□□ 0.72
LINC01515-202ENST00000593568 SMARCA4P51532 1647 aa19.54■□□□□ 0.72
LINC01515-202ENST00000593568 KIF21AQ7Z4S6 1674 aa19.53■□□□□ 0.72
LINC01515-202ENST00000593568 LAMC3Q9Y6N6 1575 aa19.44■□□□□ 0.7
LINC01515-202ENST00000593568 BAZ1BQ9UIG0 1483 aaKnown RBP19.44■□□□□ 0.7
LINC01515-202ENST00000593568 PDS5BQ9NTI5 1447 aa19.33■□□□□ 0.68
LINC01515-202ENST00000593568 PEG3Q9GZU2 1588 aa19.29■□□□□ 0.68
LINC01515-202ENST00000593568 BAZ1AQ9NRL2 1556 aaPredicted RBP19.29■□□□□ 0.68
LINC01515-202ENST00000593568 MRC2Q9UBG0 1479 aa19.23■□□□□ 0.67
LINC01515-202ENST00000593568 WDR62O43379 1518 aa19.22■□□□□ 0.67
LINC01515-202ENST00000593568 MROH2BQ7Z745 1585 aa19.2■□□□□ 0.66
LINC01515-202ENST00000593568 CADPSQ9ULU8 1353 aa19.17■□□□□ 0.66
LINC01515-202ENST00000593568 OSCARQ8IYS5 282 aa19.15■□□□□ 0.66
LINC01515-202ENST00000593568 POTEDQ86YR6 584 aa19.13■□□□□ 0.65
LINC01515-202ENST00000593568 SCAF1Q9H7N4 1312 aaKnown RBP19.11■□□□□ 0.65
LINC01515-202ENST00000593568 RIMBP3CA6NJZ7 1639 aa19.05■□□□□ 0.64
LINC01515-202ENST00000593568 RIMBP3BA6NNM3 1639 aa19.05■□□□□ 0.64
LINC01515-202ENST00000593568 RIMBP3Q9UFD9 1639 aa19.05■□□□□ 0.64
LINC01515-202ENST00000593568 CEP164Q9UPV0 1460 aa19.03■□□□□ 0.64
LINC01515-202ENST00000593568 FANCD2Q9BXW9 1451 aa18.98■□□□□ 0.63
LINC01515-202ENST00000593568 PPP4R3CPQ6ZMV5 832 aa18.98■□□□□ 0.63
LINC01515-202ENST00000593568 WIZO95785 1651 aa18.98■□□□□ 0.63
LINC01515-202ENST00000593568 MAPK8IP2Q13387 824 aaPredicted RBP18.93■□□□□ 0.62
LINC01515-202ENST00000593568 URB2Q14146 1524 aaKnown RBP18.9■□□□□ 0.62
LINC01515-202ENST00000593568 ARHGEF11O15085 1522 aa18.88■□□□□ 0.61
LINC01515-202ENST00000593568 CFTRP13569 1480 aa18.83■□□□□ 0.6
LINC01515-202ENST00000593568 CYB5RLQ6IPT4 315 aa18.8■□□□□ 0.6
LINC01515-202ENST00000593568 DMRT2Q9Y5R5 561 aa18.8■□□□□ 0.6
LINC01515-202ENST00000593568 ZNF608Q9ULD9 1512 aaPredicted RBP18.79■□□□□ 0.6
LINC01515-202ENST00000593568 TRHP20396 242 aaPredicted RBP18.77■□□□□ 0.6
LINC01515-202ENST00000593568 ARAP1Q96P48 1450 aa18.67■□□□□ 0.58
LINC01515-202ENST00000593568 CHD1O14646 1710 aa18.66■□□□□ 0.58
LINC01515-202ENST00000593568 PRDM2Q13029 1718 aa18.66■□□□□ 0.58
LINC01515-202ENST00000593568 IFT140Q96RY7 1462 aa18.65■□□□□ 0.58
LINC01515-202ENST00000593568 EIF4G3O43432 1585 aaKnown RBP18.63■□□□□ 0.57
LINC01515-202ENST00000593568 TOP2AP11388 1531 aaKnown RBP18.59■□□□□ 0.57
LINC01515-202ENST00000593568 TOPBP1Q92547 1522 aa18.56■□□□□ 0.56
LINC01515-202ENST00000593568 CNKSR2Q8WXI2 1034 aa18.55■□□□□ 0.56
LINC01515-202ENST00000593568 RSF1Q96T23 1441 aaPredicted RBP18.54■□□□□ 0.56
LINC01515-202ENST00000593568 AQRO60306 1485 aaKnown RBP eCLIP18.53■□□□□ 0.56
LINC01515-202ENST00000593568 FBLN2P98095 1184 aa18.52■□□□□ 0.56
LINC01515-202ENST00000593568 TARBP1Q13395 1621 aaKnown RBP18.48■□□□□ 0.55
LINC01515-202ENST00000593568 NCBP3Q53F19 620 aaKnown RBP18.45■□□□□ 0.54
LINC01515-202ENST00000593568 CCDC88BA6NC98 1476 aa18.43■□□□□ 0.54
LINC01515-202ENST00000593568 DNMBPQ6XZF7 1577 aa18.42■□□□□ 0.54
LINC01515-202ENST00000593568 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
LINC01515-202ENST00000593568 CLASP1Q7Z460 1538 aa18.36■□□□□ 0.53
LINC01515-202ENST00000593568 POLA1P09884 1462 aaPredicted RBP18.33■□□□□ 0.53
LINC01515-202ENST00000593568 RAD54L2Q9Y4B4 1467 aa18.33■□□□□ 0.53
LINC01515-202ENST00000593568 TDRD9Q8NDG6 1382 aaKnown RBP18.31■□□□□ 0.52
LINC01515-202ENST00000593568 SNAPC4Q5SXM2 1469 aa18.3■□□□□ 0.52
LINC01515-202ENST00000593568 HOXD11P31277 338 aaPredicted RBP18.27■□□□□ 0.52
LINC01515-202ENST00000593568 RNF216Q9NWF9 866 aaPredicted RBP18.27■□□□□ 0.52
LINC01515-202ENST00000593568 SYNJ1O43426 1573 aa18.25■□□□□ 0.51
LINC01515-202ENST00000593568 SOGA1O94964 1423 aa18.23■□□□□ 0.51
LINC01515-202ENST00000593568 CHMP7Q8WUX9 453 aaPredicted RBP18.23■□□□□ 0.51
LINC01515-202ENST00000593568 GAPVD1Q14C86 1478 aa18.2■□□□□ 0.5
LINC01515-202ENST00000593568 MAGI1Q96QZ7 1491 aaPredicted RBP18.15■□□□□ 0.5
LINC01515-202ENST00000593568 FGD5Q6ZNL6 1462 aa18.14■□□□□ 0.5
LINC01515-202ENST00000593568 KCNA4P22459 653 aa18.13■□□□□ 0.49
LINC01515-202ENST00000593568 SYNJ2O15056 1496 aa18.13■□□□□ 0.49
LINC01515-202ENST00000593568 ERCC6L2Q5T890 1561 aa18.13■□□□□ 0.49
LINC01515-202ENST00000593568 WDR97A6NE52 1622 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms