RNA–Protein interactions for RNA: ENST00000593455.5

PSMC4-203, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 5

Gene PSMC4, Length 1,532 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-203ENST00000593455 NISCHQ9Y2I1 1504 aa35.21■■■■□ 3.23
PSMC4-203ENST00000593455 CCDC180Q9P1Z9 1646 aa31.11■■■□□ 2.57
PSMC4-203ENST00000593455 ABCC9O60706 1549 aa30.27■■■□□ 2.44
PSMC4-203ENST00000593455 DCAF8L2P0C7V8 631 aa29.54■■■□□ 2.32
PSMC4-203ENST00000593455 ZCCHC6Q5VYS8 1495 aaKnown RBP29.36■■■□□ 2.29
PSMC4-203ENST00000593455 NACADO15069 1562 aa29.25■■■□□ 2.27
PSMC4-203ENST00000593455 RB1CC1Q8TDY2 1594 aa29.22■■■□□ 2.27
PSMC4-203ENST00000593455 MYO15BQ96JP2 1530 aa29.15■■■□□ 2.26
PSMC4-203ENST00000593455 DCAF1Q9Y4B6 1507 aa29.13■■■□□ 2.25
PSMC4-203ENST00000593455 SCRIBQ14160 1630 aa28.46■■■□□ 2.15
PSMC4-203ENST00000593455 UNC13AQ9UPW8 1703 aa28.43■■■□□ 2.14
PSMC4-203ENST00000593455 PABPN1Q86U42 306 aaKnown RBP eCLIP28.39■■■□□ 2.14
PSMC4-203ENST00000593455 BICRAQ9NZM4 1560 aa28.24■■■□□ 2.11
PSMC4-203ENST00000593455 SHROOM4Q9ULL8 1493 aa28.08■■■□□ 2.09
PSMC4-203ENST00000593455 EIF4G1Q04637 1599 aaKnown RBP27.53■■■□□ 2
PSMC4-203ENST00000593455 DNAJC5BQ9UF47 199 aa27.51■■□□□ 1.99
PSMC4-203ENST00000593455 CECR2Q9BXF3 1484 aa27.39■■□□□ 1.98
PSMC4-203ENST00000593455 CC2D2AQ9P2K1 1620 aa27.34■■□□□ 1.97
PSMC4-203ENST00000593455 BAZ1AQ9NRL2 1556 aaPredicted RBP27.29■■□□□ 1.96
PSMC4-203ENST00000593455 SMARCA4P51532 1647 aa27.23■■□□□ 1.95
PSMC4-203ENST00000593455 MROH2BQ7Z745 1585 aa27.13■■□□□ 1.93
PSMC4-203ENST00000593455 ATAD2BQ9ULI0 1458 aa27.05■■□□□ 1.92
PSMC4-203ENST00000593455 SMARCA2P51531 1590 aa27.05■■□□□ 1.92
PSMC4-203ENST00000593455 NCAPD3P42695 1498 aa27■■□□□ 1.91
PSMC4-203ENST00000593455 RSF1Q96T23 1441 aaPredicted RBP26.95■■□□□ 1.91
PSMC4-203ENST00000593455 PEG3Q9GZU2 1588 aa26.94■■□□□ 1.9
PSMC4-203ENST00000593455 BAZ1BQ9UIG0 1483 aaKnown RBP26.88■■□□□ 1.89
PSMC4-203ENST00000593455 HMGXB3Q12766 1538 aa26.85■■□□□ 1.89
PSMC4-203ENST00000593455 WIZO95785 1651 aa26.84■■□□□ 1.89
PSMC4-203ENST00000593455 SUPT5HO00267 1087 aaKnown RBP26.65■■□□□ 1.86
PSMC4-203ENST00000593455 TOP2AP11388 1531 aaKnown RBP26.58■■□□□ 1.85
PSMC4-203ENST00000593455 CCDC88BA6NC98 1476 aa26.31■■□□□ 1.8
PSMC4-203ENST00000593455 CADPSQ9ULU8 1353 aa26.27■■□□□ 1.8
PSMC4-203ENST00000593455 LAMC3Q9Y6N6 1575 aa26.23■■□□□ 1.79
PSMC4-203ENST00000593455 NESP48681 1621 aa26.23■■□□□ 1.79
PSMC4-203ENST00000593455 CFTRP13569 1480 aa26.13■■□□□ 1.77
PSMC4-203ENST00000593455 PDS5BQ9NTI5 1447 aa26.13■■□□□ 1.77
PSMC4-203ENST00000593455 ERCC6Q03468 1493 aa26.12■■□□□ 1.77
PSMC4-203ENST00000593455 FANCD2Q9BXW9 1451 aa25.95■■□□□ 1.74
PSMC4-203ENST00000593455 CEP164Q9UPV0 1460 aa25.89■■□□□ 1.73
PSMC4-203ENST00000593455 KIF21AQ7Z4S6 1674 aa25.88■■□□□ 1.73
PSMC4-203ENST00000593455 PRDM2Q13029 1718 aa25.86■■□□□ 1.73
PSMC4-203ENST00000593455 MRC2Q9UBG0 1479 aa25.77■■□□□ 1.72
PSMC4-203ENST00000593455 THOC2Q8NI27 1593 aaKnown RBP25.71■■□□□ 1.71
PSMC4-203ENST00000593455 CUX2O14529 1486 aa25.68■■□□□ 1.7
PSMC4-203ENST00000593455 WDR62O43379 1518 aa25.63■■□□□ 1.69
PSMC4-203ENST00000593455 ABCC8Q09428 1581 aa25.62■■□□□ 1.69
PSMC4-203ENST00000593455 URB2Q14146 1524 aaKnown RBP25.61■■□□□ 1.69
PSMC4-203ENST00000593455 TOPBP1Q92547 1522 aa25.53■■□□□ 1.68
PSMC4-203ENST00000593455 DNMBPQ6XZF7 1577 aa25.52■■□□□ 1.68
PSMC4-203ENST00000593455 WRNQ14191 1432 aaPredicted RBP eCLIP25.44■■□□□ 1.66
PSMC4-203ENST00000593455 CUX1P39880 1505 aa25.42■■□□□ 1.66
PSMC4-203ENST00000593455 POLA1P09884 1462 aaPredicted RBP25.34■■□□□ 1.65
PSMC4-203ENST00000593455 IFT140Q96RY7 1462 aa25.34■■□□□ 1.65
PSMC4-203ENST00000593455 FGD5Q6ZNL6 1462 aa25.33■■□□□ 1.65
PSMC4-203ENST00000593455 SOGA1O94964 1423 aa25.32■■□□□ 1.64
PSMC4-203ENST00000593455 TOP2BQ02880 1626 aa25.29■■□□□ 1.64
PSMC4-203ENST00000593455 SYNJ1O43426 1573 aa25.27■■□□□ 1.64
PSMC4-203ENST00000593455 BIVM-ERCC5R4GMW8 1640 aa25.26■■□□□ 1.63
PSMC4-203ENST00000593455 RAD54L2Q9Y4B4 1467 aa25.24■■□□□ 1.63
PSMC4-203ENST00000593455 TARBP1Q13395 1621 aaKnown RBP25.18■■□□□ 1.62
PSMC4-203ENST00000593455 TRIM41Q8WV44 630 aa25.17■■□□□ 1.62
PSMC4-203ENST00000593455 ZNF608Q9ULD9 1512 aaPredicted RBP25.15■■□□□ 1.62
PSMC4-203ENST00000593455 TDRD9Q8NDG6 1382 aaKnown RBP25.13■■□□□ 1.61
PSMC4-203ENST00000593455 AQRO60306 1485 aaKnown RBP eCLIP25.1■■□□□ 1.613e-7■■■■□ 23.9
PSMC4-203ENST00000593455 ABCA10Q8WWZ4 1543 aa25.09■■□□□ 1.61
PSMC4-203ENST00000593455 EIF4G3O43432 1585 aaKnown RBP25.04■■□□□ 1.6
PSMC4-203ENST00000593455 WDR97A6NE52 1622 aa25.03■■□□□ 1.6
PSMC4-203ENST00000593455 GAPVD1Q14C86 1478 aa25■■□□□ 1.59
PSMC4-203ENST00000593455 CHIC1Q5VXU3 224 aa24.98■■□□□ 1.59
PSMC4-203ENST00000593455 GRIN2BQ13224 1484 aa24.95■■□□□ 1.59
PSMC4-203ENST00000593455 KIF27Q86VH2 1401 aa24.93■■□□□ 1.58
PSMC4-203ENST00000593455 ABCA5Q8WWZ7 1642 aa24.91■■□□□ 1.58
PSMC4-203ENST00000593455 FBLN2P98095 1184 aa24.88■■□□□ 1.57
PSMC4-203ENST00000593455 SNAPC4Q5SXM2 1469 aa24.85■■□□□ 1.57
PSMC4-203ENST00000593455 CHMP7Q8WUX9 453 aaPredicted RBP24.84■■□□□ 1.57
PSMC4-203ENST00000593455 MAGI1Q96QZ7 1491 aaPredicted RBP24.84■■□□□ 1.57
PSMC4-203ENST00000593455 PBRM1Q86U86 1689 aa24.83■■□□□ 1.56
PSMC4-203ENST00000593455 ERICH3Q5RHP9 1530 aa24.81■■□□□ 1.56
PSMC4-203ENST00000593455 OSCARQ8IYS5 282 aa24.8■■□□□ 1.56
PSMC4-203ENST00000593455 IGF1RP08069 1367 aa24.76■■□□□ 1.55
PSMC4-203ENST00000593455 SYNJ2O15056 1496 aa24.75■■□□□ 1.55
PSMC4-203ENST00000593455 FHAD1B1AJZ9 1412 aa24.73■■□□□ 1.55
PSMC4-203ENST00000593455 RUSC2Q8N2Y8 1516 aa24.7■■□□□ 1.55
PSMC4-203ENST00000593455 ADAMTS12P58397 1594 aa24.66■■□□□ 1.54
PSMC4-203ENST00000593455 CARMIL1Q5VZK9 1371 aa24.65■■□□□ 1.54
PSMC4-203ENST00000593455 CHD1O14646 1710 aa24.65■■□□□ 1.54
PSMC4-203ENST00000593455 EEA1Q15075 1411 aa24.64■■□□□ 1.54
PSMC4-203ENST00000593455 FAM9AQ8IZU1 332 aaPredicted RBP24.63■■□□□ 1.53
PSMC4-203ENST00000593455 CSRNP3Q8WYN3 585 aa24.62■■□□□ 1.53
PSMC4-203ENST00000593455 CUL7Q14999 1698 aa24.62■■□□□ 1.53
PSMC4-203ENST00000593455 DNAJC5Q9H3Z4 198 aa24.61■■□□□ 1.53
PSMC4-203ENST00000593455 GRIN2AQ12879 1464 aa24.6■■□□□ 1.53
PSMC4-203ENST00000593455 RAPGEF2Q9Y4G8 1499 aa24.51■■□□□ 1.51
PSMC4-203ENST00000593455 NUP160Q12769 1436 aa24.46■■□□□ 1.51
PSMC4-203ENST00000593455 PRXQ9BXM0 1461 aa24.44■■□□□ 1.5
PSMC4-203ENST00000593455 CEP170Q5SW79 1584 aa24.42■■□□□ 1.5
PSMC4-203ENST00000593455 CLASP1Q7Z460 1538 aa24.39■■□□□ 1.49
PSMC4-203ENST00000593455 KIAA0586Q9BVV6 1533 aa24.35■■□□□ 1.49
PSMC4-203ENST00000593455 JPH4Q96JJ6 628 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms