RNA–Protein interactions for RNA: ENST00000593338.1

PCBP3-216, Transcript of poly(rC) binding protein 3, humanhuman

TSL 5

Gene PCBP3, Length 557 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP3-216ENST00000593338 NISCHQ9Y2I1 1504 aa34.92■■■■□ 3.18
PCBP3-216ENST00000593338 CCDC180Q9P1Z9 1646 aa30.87■■■□□ 2.53
PCBP3-216ENST00000593338 ABCC9O60706 1549 aa30.21■■■□□ 2.43
PCBP3-216ENST00000593338 DCAF8L2P0C7V8 631 aa29.25■■■□□ 2.27
PCBP3-216ENST00000593338 NACADO15069 1562 aa29.09■■■□□ 2.25
PCBP3-216ENST00000593338 ZCCHC6Q5VYS8 1495 aaKnown RBP29.09■■■□□ 2.25
PCBP3-216ENST00000593338 RB1CC1Q8TDY2 1594 aa29.08■■■□□ 2.25
PCBP3-216ENST00000593338 MYO15BQ96JP2 1530 aa28.99■■■□□ 2.23
PCBP3-216ENST00000593338 DCAF1Q9Y4B6 1507 aa28.9■■■□□ 2.22
PCBP3-216ENST00000593338 PABPN1Q86U42 306 aaKnown RBP eCLIP28.34■■■□□ 2.13
PCBP3-216ENST00000593338 UNC13AQ9UPW8 1703 aa28.23■■■□□ 2.11
PCBP3-216ENST00000593338 SCRIBQ14160 1630 aa28.21■■■□□ 2.11
PCBP3-216ENST00000593338 BICRAQ9NZM4 1560 aa28.16■■■□□ 2.1
PCBP3-216ENST00000593338 SHROOM4Q9ULL8 1493 aa27.94■■■□□ 2.06
PCBP3-216ENST00000593338 DNAJC5BQ9UF47 199 aa27.7■■■□□ 2.02
PCBP3-216ENST00000593338 EIF4G1Q04637 1599 aaKnown RBP27.43■■□□□ 1.98
PCBP3-216ENST00000593338 CC2D2AQ9P2K1 1620 aa27.27■■□□□ 1.96
PCBP3-216ENST00000593338 CECR2Q9BXF3 1484 aa27.2■■□□□ 1.95
PCBP3-216ENST00000593338 BAZ1AQ9NRL2 1556 aaPredicted RBP27.04■■□□□ 1.92
PCBP3-216ENST00000593338 SMARCA4P51532 1647 aa27■■□□□ 1.91
PCBP3-216ENST00000593338 ATAD2BQ9ULI0 1458 aa26.92■■□□□ 1.9
PCBP3-216ENST00000593338 NCAPD3P42695 1498 aa26.91■■□□□ 1.9
PCBP3-216ENST00000593338 MROH2BQ7Z745 1585 aa26.9■■□□□ 1.9
PCBP3-216ENST00000593338 SMARCA2P51531 1590 aa26.85■■□□□ 1.89
PCBP3-216ENST00000593338 PEG3Q9GZU2 1588 aa26.77■■□□□ 1.88
PCBP3-216ENST00000593338 HMGXB3Q12766 1538 aa26.7■■□□□ 1.87
PCBP3-216ENST00000593338 RSF1Q96T23 1441 aaPredicted RBP26.7■■□□□ 1.86
PCBP3-216ENST00000593338 BAZ1BQ9UIG0 1483 aaKnown RBP26.68■■□□□ 1.86
PCBP3-216ENST00000593338 WIZO95785 1651 aa26.55■■□□□ 1.84
PCBP3-216ENST00000593338 TOP2AP11388 1531 aaKnown RBP26.33■■□□□ 1.81
PCBP3-216ENST00000593338 SUPT5HO00267 1087 aaKnown RBP26.17■■□□□ 1.78
PCBP3-216ENST00000593338 NESP48681 1621 aa26.16■■□□□ 1.78
PCBP3-216ENST00000593338 CADPSQ9ULU8 1353 aa26.15■■□□□ 1.78
PCBP3-216ENST00000593338 LAMC3Q9Y6N6 1575 aa26.09■■□□□ 1.77
PCBP3-216ENST00000593338 CCDC88BA6NC98 1476 aa26.08■■□□□ 1.77
PCBP3-216ENST00000593338 ERCC6Q03468 1493 aa26.04■■□□□ 1.76
PCBP3-216ENST00000593338 PDS5BQ9NTI5 1447 aa26.02■■□□□ 1.76
PCBP3-216ENST00000593338 CFTRP13569 1480 aa25.98■■□□□ 1.75
PCBP3-216ENST00000593338 FANCD2Q9BXW9 1451 aa25.8■■□□□ 1.72
PCBP3-216ENST00000593338 CEP164Q9UPV0 1460 aa25.74■■□□□ 1.71
PCBP3-216ENST00000593338 KIF21AQ7Z4S6 1674 aa25.73■■□□□ 1.71
PCBP3-216ENST00000593338 CUX2O14529 1486 aa25.72■■□□□ 1.71
PCBP3-216ENST00000593338 MRC2Q9UBG0 1479 aa25.67■■□□□ 1.7
PCBP3-216ENST00000593338 THOC2Q8NI27 1593 aaKnown RBP25.65■■□□□ 1.7
PCBP3-216ENST00000593338 PRDM2Q13029 1718 aa25.56■■□□□ 1.68
PCBP3-216ENST00000593338 WDR62O43379 1518 aa25.55■■□□□ 1.68
PCBP3-216ENST00000593338 URB2Q14146 1524 aaKnown RBP25.51■■□□□ 1.67
PCBP3-216ENST00000593338 ABCC8Q09428 1581 aa25.43■■□□□ 1.66
PCBP3-216ENST00000593338 TOPBP1Q92547 1522 aa25.37■■□□□ 1.65
PCBP3-216ENST00000593338 DNMBPQ6XZF7 1577 aa25.33■■□□□ 1.65
PCBP3-216ENST00000593338 IFT140Q96RY7 1462 aa25.22■■□□□ 1.63
PCBP3-216ENST00000593338 CUX1P39880 1505 aa25.22■■□□□ 1.63
PCBP3-216ENST00000593338 POLA1P09884 1462 aaPredicted RBP25.18■■□□□ 1.62
PCBP3-216ENST00000593338 WRNQ14191 1432 aaPredicted RBP eCLIP25.16■■□□□ 1.62
PCBP3-216ENST00000593338 SOGA1O94964 1423 aa25.14■■□□□ 1.62
PCBP3-216ENST00000593338 FGD5Q6ZNL6 1462 aa25.13■■□□□ 1.61
PCBP3-216ENST00000593338 RAD54L2Q9Y4B4 1467 aa25.08■■□□□ 1.6
PCBP3-216ENST00000593338 ZNF608Q9ULD9 1512 aaPredicted RBP25.07■■□□□ 1.6
PCBP3-216ENST00000593338 TARBP1Q13395 1621 aaKnown RBP25.04■■□□□ 1.6
PCBP3-216ENST00000593338 TOP2BQ02880 1626 aa25.02■■□□□ 1.6
PCBP3-216ENST00000593338 SYNJ1O43426 1573 aa25■■□□□ 1.59
PCBP3-216ENST00000593338 AQRO60306 1485 aaKnown RBP eCLIP24.99■■□□□ 1.59
PCBP3-216ENST00000593338 TDRD9Q8NDG6 1382 aaKnown RBP24.99■■□□□ 1.59
PCBP3-216ENST00000593338 BIVM-ERCC5R4GMW8 1640 aa24.96■■□□□ 1.59
PCBP3-216ENST00000593338 ABCA10Q8WWZ4 1543 aa24.91■■□□□ 1.58
PCBP3-216ENST00000593338 EIF4G3O43432 1585 aaKnown RBP24.89■■□□□ 1.58
PCBP3-216ENST00000593338 DNAJC5Q9H3Z4 198 aa24.88■■□□□ 1.57
PCBP3-216ENST00000593338 WDR97A6NE52 1622 aa24.86■■□□□ 1.57
PCBP3-216ENST00000593338 GAPVD1Q14C86 1478 aa24.81■■□□□ 1.56
PCBP3-216ENST00000593338 GRIN2BQ13224 1484 aa24.8■■□□□ 1.56
PCBP3-216ENST00000593338 OSCARQ8IYS5 282 aa24.78■■□□□ 1.56
PCBP3-216ENST00000593338 TRIM41Q8WV44 630 aa24.74■■□□□ 1.55
PCBP3-216ENST00000593338 FBLN2P98095 1184 aa24.72■■□□□ 1.55
PCBP3-216ENST00000593338 ABCA5Q8WWZ7 1642 aa24.72■■□□□ 1.55
PCBP3-216ENST00000593338 SNAPC4Q5SXM2 1469 aa24.71■■□□□ 1.55
PCBP3-216ENST00000593338 MAGI1Q96QZ7 1491 aaPredicted RBP24.7■■□□□ 1.55
PCBP3-216ENST00000593338 CHMP7Q8WUX9 453 aaPredicted RBP24.69■■□□□ 1.54
PCBP3-216ENST00000593338 KIF27Q86VH2 1401 aa24.64■■□□□ 1.54
PCBP3-216ENST00000593338 SYNJ2O15056 1496 aa24.61■■□□□ 1.53
PCBP3-216ENST00000593338 ERICH3Q5RHP9 1530 aa24.6■■□□□ 1.53
PCBP3-216ENST00000593338 PBRM1Q86U86 1689 aa24.58■■□□□ 1.53
PCBP3-216ENST00000593338 IGF1RP08069 1367 aa24.57■■□□□ 1.52
PCBP3-216ENST00000593338 FHAD1B1AJZ9 1412 aa24.55■■□□□ 1.52
PCBP3-216ENST00000593338 CHIC1Q5VXU3 224 aa24.5■■□□□ 1.51
PCBP3-216ENST00000593338 CHD1O14646 1710 aa24.49■■□□□ 1.51
PCBP3-216ENST00000593338 ADAMTS12P58397 1594 aa24.47■■□□□ 1.51
PCBP3-216ENST00000593338 GRIN2AQ12879 1464 aa24.45■■□□□ 1.51
PCBP3-216ENST00000593338 RUSC2Q8N2Y8 1516 aa24.41■■□□□ 1.5
PCBP3-216ENST00000593338 CARMIL1Q5VZK9 1371 aa24.41■■□□□ 1.5
PCBP3-216ENST00000593338 NUP160Q12769 1436 aa24.35■■□□□ 1.49
PCBP3-216ENST00000593338 CUL7Q14999 1698 aa24.34■■□□□ 1.49
PCBP3-216ENST00000593338 CLASP1Q7Z460 1538 aa24.33■■□□□ 1.49
PCBP3-216ENST00000593338 CEP170Q5SW79 1584 aa24.28■■□□□ 1.48
PCBP3-216ENST00000593338 CSRNP3Q8WYN3 585 aa24.27■■□□□ 1.48
PCBP3-216ENST00000593338 EEA1Q15075 1411 aa24.26■■□□□ 1.47
PCBP3-216ENST00000593338 ARHGEF11O15085 1522 aa24.25■■□□□ 1.47
PCBP3-216ENST00000593338 RAPGEF2Q9Y4G8 1499 aa24.24■■□□□ 1.47
PCBP3-216ENST00000593338 JPH4Q96JJ6 628 aa24.21■■□□□ 1.47
PCBP3-216ENST00000593338 FAM9AQ8IZU1 332 aaPredicted RBP24.19■■□□□ 1.46
PCBP3-216ENST00000593338 PRXQ9BXM0 1461 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms