RNA–Protein interactions for RNA: ENST00000592910.1

BLOC1S3-204, Transcript of biogenesis of lysosomal organelles complex 1 subunit 3, humanhuman

TSL 2

Gene BLOC1S3, Length 469 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3-204ENST00000592910 NISCHQ9Y2I1 1504 aa51.64■■■■■ 5.86
BLOC1S3-204ENST00000592910 CCDC180Q9P1Z9 1646 aa45.74■■■■■ 4.91
BLOC1S3-204ENST00000592910 ABCC9O60706 1549 aa44.47■■■■■ 4.71
BLOC1S3-204ENST00000592910 DCAF8L2P0C7V8 631 aa43.25■■■■■ 4.51
BLOC1S3-204ENST00000592910 ZCCHC6Q5VYS8 1495 aaKnown RBP43.06■■■■■ 4.48
BLOC1S3-204ENST00000592910 NACADO15069 1562 aa42.93■■■■■ 4.46
BLOC1S3-204ENST00000592910 RB1CC1Q8TDY2 1594 aa42.92■■■■■ 4.46
BLOC1S3-204ENST00000592910 MYO15BQ96JP2 1530 aa42.72■■■■■ 4.43
BLOC1S3-204ENST00000592910 DCAF1Q9Y4B6 1507 aa42.69■■■■■ 4.42
BLOC1S3-204ENST00000592910 UNC13AQ9UPW8 1703 aa41.93■■■■■ 4.3
BLOC1S3-204ENST00000592910 SCRIBQ14160 1630 aa41.83■■■■■ 4.29
BLOC1S3-204ENST00000592910 PABPN1Q86U42 306 aaKnown RBP eCLIP41.66■■■■■ 4.26
BLOC1S3-204ENST00000592910 BICRAQ9NZM4 1560 aa41.51■■■■■ 4.24
BLOC1S3-204ENST00000592910 SHROOM4Q9ULL8 1493 aa41.16■■■■■ 4.18
BLOC1S3-204ENST00000592910 DNAJC5BQ9UF47 199 aa40.66■■■■■ 4.1
BLOC1S3-204ENST00000592910 EIF4G1Q04637 1599 aaKnown RBP40.44■■■■■ 4.06
BLOC1S3-204ENST00000592910 CC2D2AQ9P2K1 1620 aa40.21■■■■■ 4.03
BLOC1S3-204ENST00000592910 CECR2Q9BXF3 1484 aa40.19■■■■■ 4.03
BLOC1S3-204ENST00000592910 BAZ1AQ9NRL2 1556 aaPredicted RBP40.03■■■■■ 4
BLOC1S3-204ENST00000592910 SMARCA4P51532 1647 aa40■■■■□ 3.99
BLOC1S3-204ENST00000592910 MROH2BQ7Z745 1585 aa39.81■■■■□ 3.96
BLOC1S3-204ENST00000592910 SMARCA2P51531 1590 aa39.68■■■■□ 3.94
BLOC1S3-204ENST00000592910 ATAD2BQ9ULI0 1458 aa39.68■■■■□ 3.94
BLOC1S3-204ENST00000592910 NCAPD3P42695 1498 aa39.58■■■■□ 3.93
BLOC1S3-204ENST00000592910 PEG3Q9GZU2 1588 aa39.54■■■■□ 3.92
BLOC1S3-204ENST00000592910 RSF1Q96T23 1441 aaPredicted RBP39.49■■■■□ 3.91
BLOC1S3-204ENST00000592910 WIZO95785 1651 aa39.45■■■■□ 3.91
BLOC1S3-204ENST00000592910 BAZ1BQ9UIG0 1483 aaKnown RBP39.43■■■■□ 3.9
BLOC1S3-204ENST00000592910 HMGXB3Q12766 1538 aa39.42■■■■□ 3.9
BLOC1S3-204ENST00000592910 TOP2AP11388 1531 aaKnown RBP39.01■■■■□ 3.84
BLOC1S3-204ENST00000592910 SUPT5HO00267 1087 aaKnown RBP38.98■■■■□ 3.83
BLOC1S3-204ENST00000592910 CCDC88BA6NC98 1476 aa38.57■■■■□ 3.76
BLOC1S3-204ENST00000592910 NESP48681 1621 aa38.56■■■■□ 3.76
BLOC1S3-204ENST00000592910 LAMC3Q9Y6N6 1575 aa38.51■■■■□ 3.76
BLOC1S3-204ENST00000592910 CADPSQ9ULU8 1353 aa38.5■■■■□ 3.75
BLOC1S3-204ENST00000592910 ERCC6Q03468 1493 aa38.35■■■■□ 3.73
BLOC1S3-204ENST00000592910 CFTRP13569 1480 aa38.31■■■■□ 3.72
BLOC1S3-204ENST00000592910 PDS5BQ9NTI5 1447 aa38.29■■■■□ 3.72
BLOC1S3-204ENST00000592910 KIF21AQ7Z4S6 1674 aa38.14■■■■□ 3.7
BLOC1S3-204ENST00000592910 PRDM2Q13029 1718 aa38.11■■■■□ 3.69
BLOC1S3-204ENST00000592910 FANCD2Q9BXW9 1451 aa38.06■■■■□ 3.68
BLOC1S3-204ENST00000592910 CEP164Q9UPV0 1460 aa38■■■■□ 3.67
BLOC1S3-204ENST00000592910 THOC2Q8NI27 1593 aaKnown RBP37.84■■■■□ 3.65
BLOC1S3-204ENST00000592910 MRC2Q9UBG0 1479 aa37.84■■■■□ 3.65
BLOC1S3-204ENST00000592910 CUX2O14529 1486 aa37.71■■■■□ 3.63
BLOC1S3-204ENST00000592910 WDR62O43379 1518 aa37.65■■■■□ 3.62
BLOC1S3-204ENST00000592910 URB2Q14146 1524 aaKnown RBP37.61■■■■□ 3.61
BLOC1S3-204ENST00000592910 ABCC8Q09428 1581 aa37.54■■■■□ 3.6
BLOC1S3-204ENST00000592910 TOPBP1Q92547 1522 aa37.48■■■■□ 3.59
BLOC1S3-204ENST00000592910 DNMBPQ6XZF7 1577 aa37.47■■■■□ 3.59
BLOC1S3-204ENST00000592910 CUX1P39880 1505 aa37.32■■■■□ 3.57
BLOC1S3-204ENST00000592910 WRNQ14191 1432 aaPredicted RBP eCLIP37.28■■■■□ 3.56
BLOC1S3-204ENST00000592910 POLA1P09884 1462 aaPredicted RBP37.18■■■■□ 3.54
BLOC1S3-204ENST00000592910 FGD5Q6ZNL6 1462 aa37.17■■■■□ 3.54
BLOC1S3-204ENST00000592910 IFT140Q96RY7 1462 aa37.16■■■■□ 3.54
BLOC1S3-204ENST00000592910 TOP2BQ02880 1626 aa37.12■■■■□ 3.53
BLOC1S3-204ENST00000592910 SYNJ1O43426 1573 aa37.12■■■■□ 3.53
BLOC1S3-204ENST00000592910 BIVM-ERCC5R4GMW8 1640 aa37.1■■■■□ 3.53
BLOC1S3-204ENST00000592910 SOGA1O94964 1423 aa37.1■■■■□ 3.53
BLOC1S3-204ENST00000592910 RAD54L2Q9Y4B4 1467 aa37.05■■■■□ 3.52
BLOC1S3-204ENST00000592910 TARBP1Q13395 1621 aaKnown RBP37■■■■□ 3.51
BLOC1S3-204ENST00000592910 ZNF608Q9ULD9 1512 aaPredicted RBP36.94■■■■□ 3.5
BLOC1S3-204ENST00000592910 DNAJC5Q9H3Z4 198 aa36.87■■■■□ 3.49
BLOC1S3-204ENST00000592910 TDRD9Q8NDG6 1382 aaKnown RBP36.84■■■■□ 3.49
BLOC1S3-204ENST00000592910 AQRO60306 1485 aaKnown RBP eCLIP36.83■■■■□ 3.49
BLOC1S3-204ENST00000592910 EIF4G3O43432 1585 aaKnown RBP36.82■■■■□ 3.48
BLOC1S3-204ENST00000592910 ABCA10Q8WWZ4 1543 aa36.8■■■■□ 3.48
BLOC1S3-204ENST00000592910 WDR97A6NE52 1622 aa36.78■■■■□ 3.48
BLOC1S3-204ENST00000592910 TRIM41Q8WV44 630 aa36.78■■■■□ 3.48
BLOC1S3-204ENST00000592910 GAPVD1Q14C86 1478 aa36.66■■■■□ 3.46
BLOC1S3-204ENST00000592910 ABCA5Q8WWZ7 1642 aa36.59■■■■□ 3.45
BLOC1S3-204ENST00000592910 GRIN2BQ13224 1484 aa36.59■■■■□ 3.45
BLOC1S3-204ENST00000592910 PBRM1Q86U86 1689 aa36.56■■■■□ 3.44
BLOC1S3-204ENST00000592910 CHIC1Q5VXU3 224 aa36.51■■■■□ 3.44
BLOC1S3-204ENST00000592910 KIF27Q86VH2 1401 aa36.49■■■■□ 3.43
BLOC1S3-204ENST00000592910 SNAPC4Q5SXM2 1469 aa36.48■■■■□ 3.43
BLOC1S3-204ENST00000592910 FBLN2P98095 1184 aa36.46■■■■□ 3.43
BLOC1S3-204ENST00000592910 MAGI1Q96QZ7 1491 aaPredicted RBP36.43■■■■□ 3.42
BLOC1S3-204ENST00000592910 ERICH3Q5RHP9 1530 aa36.38■■■■□ 3.41
BLOC1S3-204ENST00000592910 CHMP7Q8WUX9 453 aaPredicted RBP36.37■■■■□ 3.41
BLOC1S3-204ENST00000592910 OSCARQ8IYS5 282 aa36.33■■■■□ 3.41
BLOC1S3-204ENST00000592910 CHD1O14646 1710 aa36.33■■■■□ 3.41
BLOC1S3-204ENST00000592910 SYNJ2O15056 1496 aa36.3■■■■□ 3.4
BLOC1S3-204ENST00000592910 IGF1RP08069 1367 aa36.25■■■■□ 3.39
BLOC1S3-204ENST00000592910 FHAD1B1AJZ9 1412 aa36.24■■■■□ 3.39
BLOC1S3-204ENST00000592910 RUSC2Q8N2Y8 1516 aa36.24■■■■□ 3.39
BLOC1S3-204ENST00000592910 ADAMTS12P58397 1594 aa36.23■■■■□ 3.39
BLOC1S3-204ENST00000592910 CUL7Q14999 1698 aa36.15■■■■□ 3.38
BLOC1S3-204ENST00000592910 GRIN2AQ12879 1464 aa36.11■■■■□ 3.37
BLOC1S3-204ENST00000592910 CARMIL1Q5VZK9 1371 aa36.1■■■■□ 3.37
BLOC1S3-204ENST00000592910 FAM9AQ8IZU1 332 aaPredicted RBP36.05■■■■□ 3.36
BLOC1S3-204ENST00000592910 EEA1Q15075 1411 aa36.03■■■■□ 3.36
BLOC1S3-204ENST00000592910 CSRNP3Q8WYN3 585 aa35.99■■■■□ 3.35
BLOC1S3-204ENST00000592910 RAPGEF2Q9Y4G8 1499 aa35.92■■■■□ 3.34
BLOC1S3-204ENST00000592910 CEP170Q5SW79 1584 aa35.89■■■■□ 3.34
BLOC1S3-204ENST00000592910 NUP160Q12769 1436 aa35.88■■■■□ 3.33
BLOC1S3-204ENST00000592910 CLASP1Q7Z460 1538 aa35.85■■■■□ 3.33
BLOC1S3-204ENST00000592910 PRXQ9BXM0 1461 aa35.8■■■■□ 3.32
BLOC1S3-204ENST00000592910 KIAA0586Q9BVV6 1533 aa35.69■■■■□ 3.3
BLOC1S3-204ENST00000592910 JPH4Q96JJ6 628 aa35.64■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms