RNA–Protein interactions for RNA: ENST00000592573.1

RDH13-221, Transcript of retinol dehydrogenase 13, humanhuman

TSL 2

Gene RDH13, Length 1,481 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-221ENST00000592573 NISCHQ9Y2I1 1504 aa42.21■■■■■ 4.35
RDH13-221ENST00000592573 CCDC180Q9P1Z9 1646 aa37.17■■■■□ 3.54
RDH13-221ENST00000592573 ABCC9O60706 1549 aa36.2■■■■□ 3.39
RDH13-221ENST00000592573 DCAF8L2P0C7V8 631 aa35.31■■■■□ 3.24
RDH13-221ENST00000592573 ZCCHC6Q5VYS8 1495 aaKnown RBP35.25■■■■□ 3.23
RDH13-221ENST00000592573 NACADO15069 1562 aa34.89■■■■□ 3.18
RDH13-221ENST00000592573 RB1CC1Q8TDY2 1594 aa34.84■■■■□ 3.17
RDH13-221ENST00000592573 DCAF1Q9Y4B6 1507 aa34.81■■■■□ 3.16
RDH13-221ENST00000592573 MYO15BQ96JP2 1530 aa34.74■■■■□ 3.15
RDH13-221ENST00000592573 SCRIBQ14160 1630 aa34.19■■■■□ 3.06
RDH13-221ENST00000592573 UNC13AQ9UPW8 1703 aa34.07■■■■□ 3.04
RDH13-221ENST00000592573 PABPN1Q86U42 306 aaKnown RBP eCLIP34■■■■□ 3.03
RDH13-221ENST00000592573 SHROOM4Q9ULL8 1493 aa33.9■■■■□ 3.02
RDH13-221ENST00000592573 BICRAQ9NZM4 1560 aa33.84■■■■□ 3.01
RDH13-221ENST00000592573 CECR2Q9BXF3 1484 aa32.94■■■□□ 2.86
RDH13-221ENST00000592573 EIF4G1Q04637 1599 aaKnown RBP32.9■■■□□ 2.86
RDH13-221ENST00000592573 DNAJC5BQ9UF47 199 aa32.87■■■□□ 2.85
RDH13-221ENST00000592573 CC2D2AQ9P2K1 1620 aa32.67■■■□□ 2.82
RDH13-221ENST00000592573 SMARCA4P51532 1647 aa32.64■■■□□ 2.82
RDH13-221ENST00000592573 BAZ1AQ9NRL2 1556 aaPredicted RBP32.64■■■□□ 2.82
RDH13-221ENST00000592573 MROH2BQ7Z745 1585 aa32.62■■■□□ 2.81
RDH13-221ENST00000592573 RSF1Q96T23 1441 aaPredicted RBP32.39■■■□□ 2.78
RDH13-221ENST00000592573 ATAD2BQ9ULI0 1458 aa32.38■■■□□ 2.77
RDH13-221ENST00000592573 SMARCA2P51531 1590 aa32.28■■■□□ 2.76
RDH13-221ENST00000592573 WIZO95785 1651 aa32.27■■■□□ 2.76
RDH13-221ENST00000592573 NCAPD3P42695 1498 aa32.23■■■□□ 2.75
RDH13-221ENST00000592573 PEG3Q9GZU2 1588 aa32.22■■■□□ 2.75
RDH13-221ENST00000592573 BAZ1BQ9UIG0 1483 aaKnown RBP32.14■■■□□ 2.74
RDH13-221ENST00000592573 SUPT5HO00267 1087 aaKnown RBP32.1■■■□□ 2.73
RDH13-221ENST00000592573 HMGXB3Q12766 1538 aa32.08■■■□□ 2.73
RDH13-221ENST00000592573 TOP2AP11388 1531 aaKnown RBP31.89■■■□□ 2.7
RDH13-221ENST00000592573 CCDC88BA6NC98 1476 aa31.59■■■□□ 2.65
RDH13-221ENST00000592573 NESP48681 1621 aa31.48■■■□□ 2.63
RDH13-221ENST00000592573 CADPSQ9ULU8 1353 aa31.36■■■□□ 2.61
RDH13-221ENST00000592573 LAMC3Q9Y6N6 1575 aa31.27■■■□□ 2.6
RDH13-221ENST00000592573 CFTRP13569 1480 aa31.26■■■□□ 2.59
RDH13-221ENST00000592573 ERCC6Q03468 1493 aa31.11■■■□□ 2.57
RDH13-221ENST00000592573 PDS5BQ9NTI5 1447 aa31.09■■■□□ 2.57
RDH13-221ENST00000592573 FANCD2Q9BXW9 1451 aa31.03■■■□□ 2.56
RDH13-221ENST00000592573 KIF21AQ7Z4S6 1674 aa31■■■□□ 2.55
RDH13-221ENST00000592573 PRDM2Q13029 1718 aa30.92■■■□□ 2.54
RDH13-221ENST00000592573 CEP164Q9UPV0 1460 aa30.92■■■□□ 2.54
RDH13-221ENST00000592573 MRC2Q9UBG0 1479 aa30.78■■■□□ 2.52
RDH13-221ENST00000592573 THOC2Q8NI27 1593 aaKnown RBP30.77■■■□□ 2.52
RDH13-221ENST00000592573 URB2Q14146 1524 aaKnown RBP30.71■■■□□ 2.51
RDH13-221ENST00000592573 ABCC8Q09428 1581 aa30.64■■■□□ 2.49
RDH13-221ENST00000592573 WDR62O43379 1518 aa30.63■■■□□ 2.49
RDH13-221ENST00000592573 TOPBP1Q92547 1522 aa30.58■■■□□ 2.49
RDH13-221ENST00000592573 CUX1P39880 1505 aa30.56■■■□□ 2.48
RDH13-221ENST00000592573 DNMBPQ6XZF7 1577 aa30.54■■■□□ 2.48
RDH13-221ENST00000592573 WRNQ14191 1432 aaPredicted RBP eCLIP30.51■■■□□ 2.47
RDH13-221ENST00000592573 CUX2O14529 1486 aa30.49■■■□□ 2.47
RDH13-221ENST00000592573 SYNJ1O43426 1573 aa30.44■■■□□ 2.46
RDH13-221ENST00000592573 FGD5Q6ZNL6 1462 aa30.37■■■□□ 2.45
RDH13-221ENST00000592573 POLA1P09884 1462 aaPredicted RBP30.36■■■□□ 2.45
RDH13-221ENST00000592573 TOP2BQ02880 1626 aa30.34■■■□□ 2.45
RDH13-221ENST00000592573 RAD54L2Q9Y4B4 1467 aa30.31■■■□□ 2.44
RDH13-221ENST00000592573 BIVM-ERCC5R4GMW8 1640 aa30.3■■■□□ 2.44
RDH13-221ENST00000592573 SOGA1O94964 1423 aa30.26■■■□□ 2.43
RDH13-221ENST00000592573 IFT140Q96RY7 1462 aa30.22■■■□□ 2.43
RDH13-221ENST00000592573 TRIM41Q8WV44 630 aa30.19■■■□□ 2.42
RDH13-221ENST00000592573 TARBP1Q13395 1621 aaKnown RBP30.17■■■□□ 2.42
RDH13-221ENST00000592573 ZNF608Q9ULD9 1512 aaPredicted RBP30.17■■■□□ 2.42
RDH13-221ENST00000592573 CHIC1Q5VXU3 224 aa30.15■■■□□ 2.42
RDH13-221ENST00000592573 TDRD9Q8NDG6 1382 aaKnown RBP30.11■■■□□ 2.41
RDH13-221ENST00000592573 AQRO60306 1485 aaKnown RBP eCLIP30.07■■■□□ 2.41e-9■■■■■ 45.4
RDH13-221ENST00000592573 ABCA10Q8WWZ4 1543 aa30.04■■■□□ 2.4
RDH13-221ENST00000592573 WDR97A6NE52 1622 aa30■■■□□ 2.39
RDH13-221ENST00000592573 EIF4G3O43432 1585 aaKnown RBP29.98■■■□□ 2.39
RDH13-221ENST00000592573 GAPVD1Q14C86 1478 aa29.9■■■□□ 2.38
RDH13-221ENST00000592573 ABCA5Q8WWZ7 1642 aa29.87■■■□□ 2.37
RDH13-221ENST00000592573 RUSC2Q8N2Y8 1516 aa29.83■■■□□ 2.37
RDH13-221ENST00000592573 KIF27Q86VH2 1401 aa29.82■■■□□ 2.36
RDH13-221ENST00000592573 GRIN2BQ13224 1484 aa29.81■■■□□ 2.36
RDH13-221ENST00000592573 SNAPC4Q5SXM2 1469 aa29.77■■■□□ 2.36
RDH13-221ENST00000592573 PBRM1Q86U86 1689 aa29.75■■■□□ 2.35
RDH13-221ENST00000592573 FAM9AQ8IZU1 332 aaPredicted RBP29.71■■■□□ 2.35
RDH13-221ENST00000592573 IGF1RP08069 1367 aa29.68■■■□□ 2.34
RDH13-221ENST00000592573 FBLN2P98095 1184 aa29.68■■■□□ 2.34
RDH13-221ENST00000592573 ERICH3Q5RHP9 1530 aa29.65■■■□□ 2.34
RDH13-221ENST00000592573 MAGI1Q96QZ7 1491 aaPredicted RBP29.63■■■□□ 2.33
RDH13-221ENST00000592573 CHMP7Q8WUX9 453 aaPredicted RBP29.58■■■□□ 2.33
RDH13-221ENST00000592573 ADAMTS12P58397 1594 aa29.57■■■□□ 2.32
RDH13-221ENST00000592573 FHAD1B1AJZ9 1412 aa29.54■■■□□ 2.32
RDH13-221ENST00000592573 SYNJ2O15056 1496 aa29.54■■■□□ 2.32
RDH13-221ENST00000592573 CARMIL1Q5VZK9 1371 aa29.51■■■□□ 2.32
RDH13-221ENST00000592573 CHD1O14646 1710 aa29.5■■■□□ 2.31
RDH13-221ENST00000592573 CSRNP3Q8WYN3 585 aa29.5■■■□□ 2.31
RDH13-221ENST00000592573 EEA1Q15075 1411 aa29.47■■■□□ 2.31
RDH13-221ENST00000592573 CUL7Q14999 1698 aa29.45■■■□□ 2.31
RDH13-221ENST00000592573 GRIN2AQ12879 1464 aa29.44■■■□□ 2.3
RDH13-221ENST00000592573 OSCARQ8IYS5 282 aa29.41■■■□□ 2.3
RDH13-221ENST00000592573 EHMT2Q96KQ7 1210 aa29.41■■■□□ 2.3
RDH13-221ENST00000592573 DNAJC5Q9H3Z4 198 aa29.39■■■□□ 2.3
RDH13-221ENST00000592573 PRXQ9BXM0 1461 aa29.36■■■□□ 2.29
RDH13-221ENST00000592573 RAPGEF2Q9Y4G8 1499 aa29.35■■■□□ 2.29
RDH13-221ENST00000592573 CEP170Q5SW79 1584 aa29.29■■■□□ 2.28
RDH13-221ENST00000592573 NUP160Q12769 1436 aa29.27■■■□□ 2.28
RDH13-221ENST00000592573 CLASP1Q7Z460 1538 aa29.18■■■□□ 2.26
RDH13-221ENST00000592573 KIF21BO75037 1637 aa29.17■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms