RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 NISCHQ9Y2I1 1504 aa26.19■■□□□ 1.78
TUBD1-211ENST00000591548 CCDC180Q9P1Z9 1646 aa22.88■■□□□ 1.25
TUBD1-211ENST00000591548 ZCCHC6Q5VYS8 1495 aaKnown RBP21.97■■□□□ 1.11
TUBD1-211ENST00000591548 ABCC9O60706 1549 aa21.79■■□□□ 1.08
TUBD1-211ENST00000591548 DCAF8L2P0C7V8 631 aa21.66■■□□□ 1.06
TUBD1-211ENST00000591548 DCAF1Q9Y4B6 1507 aa21.65■■□□□ 1.06
TUBD1-211ENST00000591548 AEBP2Q6ZN18 517 aaPredicted RBP21.47■■□□□ 1.03
TUBD1-211ENST00000591548 MYO15BQ96JP2 1530 aa21.45■■□□□ 1.02
TUBD1-211ENST00000591548 NACADO15069 1562 aa21.35■■□□□ 1.01
TUBD1-211ENST00000591548 SHROOM4Q9ULL8 1493 aa21.26■□□□□ 0.99
TUBD1-211ENST00000591548 RB1CC1Q8TDY2 1594 aa21.19■□□□□ 0.98
TUBD1-211ENST00000591548 SCRIBQ14160 1630 aa21.03■□□□□ 0.96
TUBD1-211ENST00000591548 CHIC1Q5VXU3 224 aa20.97■□□□□ 0.95
TUBD1-211ENST00000591548 UNC13AQ9UPW8 1703 aa20.77■□□□□ 0.92
TUBD1-211ENST00000591548 BICRAQ9NZM4 1560 aa20.6■□□□□ 0.89
TUBD1-211ENST00000591548 PABPN1Q86U42 306 aaKnown RBP eCLIP20.53■□□□□ 0.88
TUBD1-211ENST00000591548 CECR2Q9BXF3 1484 aa20.38■□□□□ 0.85
TUBD1-211ENST00000591548 SUPT5HO00267 1087 aaKnown RBP20.38■□□□□ 0.85
TUBD1-211ENST00000591548 RSF1Q96T23 1441 aaPredicted RBP20.27■□□□□ 0.84
TUBD1-211ENST00000591548 MROH2BQ7Z745 1585 aa20.24■□□□□ 0.83
TUBD1-211ENST00000591548 BAZ1AQ9NRL2 1556 aaPredicted RBP20.22■□□□□ 0.83
TUBD1-211ENST00000591548 SMARCA4P51532 1647 aa20.15■□□□□ 0.82
TUBD1-211ENST00000591548 WIZO95785 1651 aa20.06■□□□□ 0.8
TUBD1-211ENST00000591548 EIF4G1Q04637 1599 aaKnown RBP19.97■□□□□ 0.79
TUBD1-211ENST00000591548 PEG3Q9GZU2 1588 aa19.92■□□□□ 0.78
TUBD1-211ENST00000591548 ATAD2BQ9ULI0 1458 aa19.87■□□□□ 0.77
TUBD1-211ENST00000591548 TOP2AP11388 1531 aaKnown RBP19.83■□□□□ 0.77
TUBD1-211ENST00000591548 SMARCA2P51531 1590 aa19.83■□□□□ 0.77
TUBD1-211ENST00000591548 BAZ1BQ9UIG0 1483 aaKnown RBP19.73■□□□□ 0.75
TUBD1-211ENST00000591548 NCAPD3P42695 1498 aa19.73■□□□□ 0.75
TUBD1-211ENST00000591548 CC2D2AQ9P2K1 1620 aa19.71■□□□□ 0.75
TUBD1-211ENST00000591548 HMGXB3Q12766 1538 aa19.67■□□□□ 0.74
TUBD1-211ENST00000591548 CCDC88BA6NC98 1476 aa19.65■□□□□ 0.74
TUBD1-211ENST00000591548 DNAJC5BQ9UF47 199 aa19.39■□□□□ 0.69
TUBD1-211ENST00000591548 CFTRP13569 1480 aa19.24■□□□□ 0.67
TUBD1-211ENST00000591548 CADPSQ9ULU8 1353 aa19.2■□□□□ 0.66
TUBD1-211ENST00000591548 ABCC8Q09428 1581 aa19.18■□□□□ 0.66
TUBD1-211ENST00000591548 TRIM41Q8WV44 630 aa19.16■□□□□ 0.66
TUBD1-211ENST00000591548 PRDM2Q13029 1718 aa19.1■□□□□ 0.65
TUBD1-211ENST00000591548 NESP48681 1621 aa19.09■□□□□ 0.65
TUBD1-211ENST00000591548 WRNQ14191 1432 aaPredicted RBP eCLIP19.06■□□□□ 0.64
TUBD1-211ENST00000591548 LAMC3Q9Y6N6 1575 aa19.06■□□□□ 0.64
TUBD1-211ENST00000591548 SYNJ1O43426 1573 aa19■□□□□ 0.63
TUBD1-211ENST00000591548 FANCD2Q9BXW9 1451 aa18.98■□□□□ 0.63
TUBD1-211ENST00000591548 TOP2BQ02880 1626 aa18.93■□□□□ 0.62
TUBD1-211ENST00000591548 CUX1P39880 1505 aa18.92■□□□□ 0.62
TUBD1-211ENST00000591548 PDS5BQ9NTI5 1447 aa18.91■□□□□ 0.62
TUBD1-211ENST00000591548 BIVM-ERCC5R4GMW8 1640 aa18.91■□□□□ 0.62
TUBD1-211ENST00000591548 CEP164Q9UPV0 1460 aa18.87■□□□□ 0.61
TUBD1-211ENST00000591548 KIF21AQ7Z4S6 1674 aa18.84■□□□□ 0.61
TUBD1-211ENST00000591548 FAM9AQ8IZU1 332 aaPredicted RBP18.81■□□□□ 0.6
TUBD1-211ENST00000591548 SOGA1O94964 1423 aa18.8■□□□□ 0.6
TUBD1-211ENST00000591548 DNMBPQ6XZF7 1577 aa18.78■□□□□ 0.6
TUBD1-211ENST00000591548 URB2Q14146 1524 aaKnown RBP18.77■□□□□ 0.6
TUBD1-211ENST00000591548 TOPBP1Q92547 1522 aa18.77■□□□□ 0.6
TUBD1-211ENST00000591548 RUSC2Q8N2Y8 1516 aa18.75■□□□□ 0.59
TUBD1-211ENST00000591548 FGD5Q6ZNL6 1462 aa18.73■□□□□ 0.59
TUBD1-211ENST00000591548 LOC105371045A0A1W2PR82 267 aa18.71■□□□□ 0.59
TUBD1-211ENST00000591548 EEA1Q15075 1411 aa18.69■□□□□ 0.58
TUBD1-211ENST00000591548 MRC2Q9UBG0 1479 aa18.68■□□□□ 0.58
TUBD1-211ENST00000591548 POLA1P09884 1462 aaPredicted RBP18.67■□□□□ 0.58
TUBD1-211ENST00000591548 ERCC6Q03468 1493 aa18.67■□□□□ 0.58
TUBD1-211ENST00000591548 CSRNP3Q8WYN3 585 aa18.64■□□□□ 0.57
TUBD1-211ENST00000591548 RAD54L2Q9Y4B4 1467 aa18.61■□□□□ 0.57
TUBD1-211ENST00000591548 WDR62O43379 1518 aa18.6■□□□□ 0.57
TUBD1-211ENST00000591548 KIF27Q86VH2 1401 aa18.59■□□□□ 0.57
TUBD1-211ENST00000591548 CUX2O14529 1486 aa18.58■□□□□ 0.56
TUBD1-211ENST00000591548 THOC2Q8NI27 1593 aaKnown RBP18.58■□□□□ 0.56
TUBD1-211ENST00000591548 ABCA10Q8WWZ4 1543 aa18.57■□□□□ 0.56
TUBD1-211ENST00000591548 EHMT2Q96KQ7 1210 aa18.55■□□□□ 0.56
TUBD1-211ENST00000591548 WDR97A6NE52 1622 aa18.52■□□□□ 0.55
TUBD1-211ENST00000591548 TARBP1Q13395 1621 aaKnown RBP18.51■□□□□ 0.55
TUBD1-211ENST00000591548 PHF23Q9BUL5 403 aaPredicted RBP18.48■□□□□ 0.55
TUBD1-211ENST00000591548 KIF21BO75037 1637 aa18.47■□□□□ 0.55
TUBD1-211ENST00000591548 IGF1RP08069 1367 aa18.47■□□□□ 0.55
TUBD1-211ENST00000591548 TDRD9Q8NDG6 1382 aaKnown RBP18.45■□□□□ 0.54
TUBD1-211ENST00000591548 PRXQ9BXM0 1461 aa18.45■□□□□ 0.54
TUBD1-211ENST00000591548 GOLGA3Q08378 1498 aa18.44■□□□□ 0.54
TUBD1-211ENST00000591548 IFT140Q96RY7 1462 aa18.43■□□□□ 0.54
TUBD1-211ENST00000591548 ABCA5Q8WWZ7 1642 aa18.43■□□□□ 0.54
TUBD1-211ENST00000591548 RAPGEF2Q9Y4G8 1499 aa18.42■□□□□ 0.54
TUBD1-211ENST00000591548 GAPVD1Q14C86 1478 aa18.39■□□□□ 0.53
TUBD1-211ENST00000591548 ERICH3Q5RHP9 1530 aa18.38■□□□□ 0.53
TUBD1-211ENST00000591548 TNIKQ9UKE5 1360 aa18.37■□□□□ 0.53
TUBD1-211ENST00000591548 UBTFP17480 764 aaKnown RBP18.37■□□□□ 0.53
TUBD1-211ENST00000591548 ZNF608Q9ULD9 1512 aaPredicted RBP18.36■□□□□ 0.53
TUBD1-211ENST00000591548 AQRO60306 1485 aaKnown RBP eCLIP18.35■□□□□ 0.53
TUBD1-211ENST00000591548 CARMIL1Q5VZK9 1371 aa18.35■□□□□ 0.53
TUBD1-211ENST00000591548 CUL7Q14999 1698 aa18.3■□□□□ 0.52
TUBD1-211ENST00000591548 PBRM1Q86U86 1689 aa18.28■□□□□ 0.52
TUBD1-211ENST00000591548 EIF4G3O43432 1585 aaKnown RBP18.28■□□□□ 0.52
TUBD1-211ENST00000591548 GRIN2BQ13224 1484 aa18.27■□□□□ 0.52
TUBD1-211ENST00000591548 CEP162Q5TB80 1403 aa18.25■□□□□ 0.51
TUBD1-211ENST00000591548 ADAMTS12P58397 1594 aa18.19■□□□□ 0.5
TUBD1-211ENST00000591548 FHAD1B1AJZ9 1412 aa18.19■□□□□ 0.5
TUBD1-211ENST00000591548 SNAPC4Q5SXM2 1469 aa18.17■□□□□ 0.5
TUBD1-211ENST00000591548 CLIP1P30622 1438 aa18.14■□□□□ 0.5
TUBD1-211ENST00000591548 SENP3Q9H4L4 574 aaPredicted RBP18.14■□□□□ 0.49
TUBD1-211ENST00000591548 MAGI1Q96QZ7 1491 aaPredicted RBP18.12■□□□□ 0.49
TUBD1-211ENST00000591548 RANGAP1P46060 587 aaPredicted RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms