RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 NISCHQ9Y2I1 1504 aa43.32■■■■■ 4.53
CROCCP3-205ENST00000591316 CCDC180Q9P1Z9 1646 aa38.12■■■■□ 3.69
CROCCP3-205ENST00000591316 ABCC9O60706 1549 aa37.1■■■■□ 3.53
CROCCP3-205ENST00000591316 DCAF8L2P0C7V8 631 aa36.38■■■■□ 3.41
CROCCP3-205ENST00000591316 ZCCHC6Q5VYS8 1495 aaKnown RBP36.14■■■■□ 3.38
CROCCP3-205ENST00000591316 NACADO15069 1562 aa35.81■■■■□ 3.32
CROCCP3-205ENST00000591316 RB1CC1Q8TDY2 1594 aa35.75■■■■□ 3.31
CROCCP3-205ENST00000591316 DCAF1Q9Y4B6 1507 aa35.74■■■■□ 3.31
CROCCP3-205ENST00000591316 MYO15BQ96JP2 1530 aa35.67■■■■□ 3.3
CROCCP3-205ENST00000591316 SCRIBQ14160 1630 aa35.02■■■■□ 3.2
CROCCP3-205ENST00000591316 UNC13AQ9UPW8 1703 aa34.9■■■■□ 3.18
CROCCP3-205ENST00000591316 PABPN1Q86U42 306 aaKnown RBP eCLIP34.89■■■■□ 3.18
CROCCP3-205ENST00000591316 SHROOM4Q9ULL8 1493 aa34.81■■■■□ 3.16
CROCCP3-205ENST00000591316 BICRAQ9NZM4 1560 aa34.65■■■■□ 3.14
CROCCP3-205ENST00000591316 CECR2Q9BXF3 1484 aa33.78■■■■□ 3
CROCCP3-205ENST00000591316 EIF4G1Q04637 1599 aaKnown RBP33.72■■■□□ 2.99
CROCCP3-205ENST00000591316 DNAJC5BQ9UF47 199 aa33.68■■■□□ 2.98
CROCCP3-205ENST00000591316 BAZ1AQ9NRL2 1556 aaPredicted RBP33.51■■■□□ 2.95
CROCCP3-205ENST00000591316 CC2D2AQ9P2K1 1620 aa33.48■■■□□ 2.95
CROCCP3-205ENST00000591316 SMARCA4P51532 1647 aa33.47■■■□□ 2.95
CROCCP3-205ENST00000591316 MROH2BQ7Z745 1585 aa33.45■■■□□ 2.95
CROCCP3-205ENST00000591316 RSF1Q96T23 1441 aaPredicted RBP33.27■■■□□ 2.92
CROCCP3-205ENST00000591316 ATAD2BQ9ULI0 1458 aa33.22■■■□□ 2.91
CROCCP3-205ENST00000591316 SMARCA2P51531 1590 aa33.14■■■□□ 2.9
CROCCP3-205ENST00000591316 WIZO95785 1651 aa33.1■■■□□ 2.89
CROCCP3-205ENST00000591316 NCAPD3P42695 1498 aa33.09■■■□□ 2.89
CROCCP3-205ENST00000591316 SUPT5HO00267 1087 aaKnown RBP33.07■■■□□ 2.88
CROCCP3-205ENST00000591316 PEG3Q9GZU2 1588 aa33.05■■■□□ 2.88
CROCCP3-205ENST00000591316 BAZ1BQ9UIG0 1483 aaKnown RBP32.98■■■□□ 2.87
CROCCP3-205ENST00000591316 HMGXB3Q12766 1538 aa32.89■■■□□ 2.86
CROCCP3-205ENST00000591316 TOP2AP11388 1531 aaKnown RBP32.7■■■□□ 2.83
CROCCP3-205ENST00000591316 CCDC88BA6NC98 1476 aa32.43■■■□□ 2.78
CROCCP3-205ENST00000591316 NESP48681 1621 aa32.24■■■□□ 2.75
CROCCP3-205ENST00000591316 CADPSQ9ULU8 1353 aa32.23■■■□□ 2.75
CROCCP3-205ENST00000591316 LAMC3Q9Y6N6 1575 aa32.08■■■□□ 2.73
CROCCP3-205ENST00000591316 CFTRP13569 1480 aa32.08■■■□□ 2.73
CROCCP3-205ENST00000591316 PDS5BQ9NTI5 1447 aa31.96■■■□□ 2.71
CROCCP3-205ENST00000591316 ERCC6Q03468 1493 aa31.92■■■□□ 2.7
CROCCP3-205ENST00000591316 FANCD2Q9BXW9 1451 aa31.84■■■□□ 2.69
CROCCP3-205ENST00000591316 KIF21AQ7Z4S6 1674 aa31.75■■■□□ 2.67
CROCCP3-205ENST00000591316 CEP164Q9UPV0 1460 aa31.73■■■□□ 2.67
CROCCP3-205ENST00000591316 PRDM2Q13029 1718 aa31.71■■■□□ 2.67
CROCCP3-205ENST00000591316 MRC2Q9UBG0 1479 aa31.55■■■□□ 2.64
CROCCP3-205ENST00000591316 THOC2Q8NI27 1593 aaKnown RBP31.47■■■□□ 2.63
CROCCP3-205ENST00000591316 URB2Q14146 1524 aaKnown RBP31.47■■■□□ 2.63
CROCCP3-205ENST00000591316 ABCC8Q09428 1581 aa31.42■■■□□ 2.62
CROCCP3-205ENST00000591316 WDR62O43379 1518 aa31.37■■■□□ 2.61
CROCCP3-205ENST00000591316 TOPBP1Q92547 1522 aa31.36■■■□□ 2.61
CROCCP3-205ENST00000591316 WRNQ14191 1432 aaPredicted RBP eCLIP31.36■■■□□ 2.61
CROCCP3-205ENST00000591316 CUX1P39880 1505 aa31.32■■■□□ 2.6
CROCCP3-205ENST00000591316 DNMBPQ6XZF7 1577 aa31.32■■■□□ 2.6
CROCCP3-205ENST00000591316 CUX2O14529 1486 aa31.26■■■□□ 2.59
CROCCP3-205ENST00000591316 SYNJ1O43426 1573 aa31.19■■■□□ 2.58
CROCCP3-205ENST00000591316 FGD5Q6ZNL6 1462 aa31.15■■■□□ 2.58
CROCCP3-205ENST00000591316 TRIM41Q8WV44 630 aa31.14■■■□□ 2.58
CROCCP3-205ENST00000591316 POLA1P09884 1462 aaPredicted RBP31.14■■■□□ 2.58
CROCCP3-205ENST00000591316 TOP2BQ02880 1626 aa31.13■■■□□ 2.57
CROCCP3-205ENST00000591316 SOGA1O94964 1423 aa31.1■■■□□ 2.57
CROCCP3-205ENST00000591316 RAD54L2Q9Y4B4 1467 aa31.08■■■□□ 2.57
CROCCP3-205ENST00000591316 BIVM-ERCC5R4GMW8 1640 aa31.08■■■□□ 2.57
CROCCP3-205ENST00000591316 CHIC1Q5VXU3 224 aa31.07■■■□□ 2.56
CROCCP3-205ENST00000591316 IFT140Q96RY7 1462 aa31.02■■■□□ 2.56
CROCCP3-205ENST00000591316 TARBP1Q13395 1621 aaKnown RBP30.92■■■□□ 2.54
CROCCP3-205ENST00000591316 TDRD9Q8NDG6 1382 aaKnown RBP30.91■■■□□ 2.54
CROCCP3-205ENST00000591316 ZNF608Q9ULD9 1512 aaPredicted RBP30.91■■■□□ 2.54
CROCCP3-205ENST00000591316 AQRO60306 1485 aaKnown RBP eCLIP30.86■■■□□ 2.53
CROCCP3-205ENST00000591316 ABCA10Q8WWZ4 1543 aa30.82■■■□□ 2.52
CROCCP3-205ENST00000591316 WDR97A6NE52 1622 aa30.71■■■□□ 2.51
CROCCP3-205ENST00000591316 EIF4G3O43432 1585 aaKnown RBP30.7■■■□□ 2.51
CROCCP3-205ENST00000591316 GAPVD1Q14C86 1478 aa30.7■■■□□ 2.5
CROCCP3-205ENST00000591316 KIF27Q86VH2 1401 aa30.66■■■□□ 2.5
CROCCP3-205ENST00000591316 RUSC2Q8N2Y8 1516 aa30.62■■■□□ 2.49
CROCCP3-205ENST00000591316 ABCA5Q8WWZ7 1642 aa30.6■■■□□ 2.49
CROCCP3-205ENST00000591316 GRIN2BQ13224 1484 aa30.59■■■□□ 2.49
CROCCP3-205ENST00000591316 FAM9AQ8IZU1 332 aaPredicted RBP30.59■■■□□ 2.49
CROCCP3-205ENST00000591316 FBLN2P98095 1184 aa30.54■■■□□ 2.48
CROCCP3-205ENST00000591316 IGF1RP08069 1367 aa30.51■■■□□ 2.48
CROCCP3-205ENST00000591316 SNAPC4Q5SXM2 1469 aa30.51■■■□□ 2.47
CROCCP3-205ENST00000591316 PBRM1Q86U86 1689 aa30.48■■■□□ 2.47
CROCCP3-205ENST00000591316 CHMP7Q8WUX9 453 aaPredicted RBP30.45■■■□□ 2.47
CROCCP3-205ENST00000591316 ERICH3Q5RHP9 1530 aa30.44■■■□□ 2.46
CROCCP3-205ENST00000591316 CSRNP3Q8WYN3 585 aa30.41■■■□□ 2.46
CROCCP3-205ENST00000591316 MAGI1Q96QZ7 1491 aaPredicted RBP30.41■■■□□ 2.46
CROCCP3-205ENST00000591316 CARMIL1Q5VZK9 1371 aa30.36■■■□□ 2.45
CROCCP3-205ENST00000591316 FHAD1B1AJZ9 1412 aa30.34■■■□□ 2.45
CROCCP3-205ENST00000591316 EEA1Q15075 1411 aa30.34■■■□□ 2.45
CROCCP3-205ENST00000591316 SYNJ2O15056 1496 aa30.32■■■□□ 2.44
CROCCP3-205ENST00000591316 ADAMTS12P58397 1594 aa30.28■■■□□ 2.44
CROCCP3-205ENST00000591316 OSCARQ8IYS5 282 aa30.27■■■□□ 2.44
CROCCP3-205ENST00000591316 DNAJC5Q9H3Z4 198 aa30.26■■■□□ 2.43
CROCCP3-205ENST00000591316 EHMT2Q96KQ7 1210 aa30.24■■■□□ 2.43
CROCCP3-205ENST00000591316 CUL7Q14999 1698 aa30.22■■■□□ 2.43
CROCCP3-205ENST00000591316 CHD1O14646 1710 aa30.22■■■□□ 2.43
CROCCP3-205ENST00000591316 GRIN2AQ12879 1464 aa30.19■■■□□ 2.42
CROCCP3-205ENST00000591316 RAPGEF2Q9Y4G8 1499 aa30.17■■■□□ 2.42
CROCCP3-205ENST00000591316 PRXQ9BXM0 1461 aa30.16■■■□□ 2.42
CROCCP3-205ENST00000591316 NUP160Q12769 1436 aa30.02■■■□□ 2.4
CROCCP3-205ENST00000591316 CEP170Q5SW79 1584 aa30.01■■■□□ 2.39
CROCCP3-205ENST00000591316 UBTFP17480 764 aaKnown RBP30■■■□□ 2.39
CROCCP3-205ENST00000591316 KIF21BO75037 1637 aa29.95■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms