RNA–Protein interactions for RNA: ENST00000591245.1

GIPC1-212, Transcript of GIPC PDZ domain containing family member 1, humanhuman

TSL 3

Gene GIPC1, Length 265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIPC1-212ENST00000591245 NISCHQ9Y2I1 1504 aa18.49■□□□□ 0.55
GIPC1-212ENST00000591245 CCDC180Q9P1Z9 1646 aa16.3■□□□□ 0.2
GIPC1-212ENST00000591245 ABCC9O60706 1549 aa15.73■□□□□ 0.11
GIPC1-212ENST00000591245 DCAF8L2P0C7V8 631 aa15.52■□□□□ 0.08
GIPC1-212ENST00000591245 ZCCHC6Q5VYS8 1495 aaKnown RBP15.47■□□□□ 0.07
GIPC1-212ENST00000591245 DCAF1Q9Y4B6 1507 aa15.2■□□□□ 0.02
GIPC1-212ENST00000591245 NACADO15069 1562 aa15.19■□□□□ 0.02
GIPC1-212ENST00000591245 RB1CC1Q8TDY2 1594 aa15.19■□□□□ 0.02
GIPC1-212ENST00000591245 MYO15BQ96JP2 1530 aa15.09■□□□□ 0.01
GIPC1-212ENST00000591245 SHROOM4Q9ULL8 1493 aa15.07■□□□□ 0
GIPC1-212ENST00000591245 SCRIBQ14160 1630 aa15.05■□□□□ -0
GIPC1-212ENST00000591245 UNC13AQ9UPW8 1703 aa14.93□□□□□ -0.02
GIPC1-212ENST00000591245 PABPN1Q86U42 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
GIPC1-212ENST00000591245 BICRAQ9NZM4 1560 aa14.7□□□□□ -0.06
GIPC1-212ENST00000591245 HRCP23327 699 aa14.59□□□□□ -0.07
GIPC1-212ENST00000591245 SUPT5HO00267 1087 aaKnown RBP14.44□□□□□ -0.1
GIPC1-212ENST00000591245 CECR2Q9BXF3 1484 aa14.42□□□□□ -0.1
GIPC1-212ENST00000591245 CHIC1Q5VXU3 224 aa14.35□□□□□ -0.11
GIPC1-212ENST00000591245 SMARCA4P51532 1647 aa14.33□□□□□ -0.11
GIPC1-212ENST00000591245 BAZ1AQ9NRL2 1556 aaPredicted RBP14.32□□□□□ -0.12
GIPC1-212ENST00000591245 EIF4G1Q04637 1599 aaKnown RBP14.31□□□□□ -0.12
GIPC1-212ENST00000591245 MROH2BQ7Z745 1585 aa14.31□□□□□ -0.12
GIPC1-212ENST00000591245 WIZO95785 1651 aa14.23□□□□□ -0.13
GIPC1-212ENST00000591245 PELP1Q8IZL8 1130 aaKnown RBP14.22□□□□□ -0.13
GIPC1-212ENST00000591245 RSF1Q96T23 1441 aaPredicted RBP14.22□□□□□ -0.13
GIPC1-212ENST00000591245 CC2D2AQ9P2K1 1620 aa14.2□□□□□ -0.14
GIPC1-212ENST00000591245 ZEB1P37275 1124 aaPredicted RBP14.15□□□□□ -0.14
GIPC1-212ENST00000591245 PCGF6Q9BYE7 350 aa14.14□□□□□ -0.15
GIPC1-212ENST00000591245 SMARCA2P51531 1590 aa14.11□□□□□ -0.15
GIPC1-212ENST00000591245 ATAD2BQ9ULI0 1458 aa14.1□□□□□ -0.15
GIPC1-212ENST00000591245 BAZ1BQ9UIG0 1483 aaKnown RBP14.07□□□□□ -0.16
GIPC1-212ENST00000591245 PEG3Q9GZU2 1588 aa14.06□□□□□ -0.16
GIPC1-212ENST00000591245 TRIM26Q12899 539 aaPredicted RBP14.06□□□□□ -0.16
GIPC1-212ENST00000591245 TOP2AP11388 1531 aaKnown RBP14.03□□□□□ -0.16
GIPC1-212ENST00000591245 DNAJC5BQ9UF47 199 aa14.01□□□□□ -0.17
GIPC1-212ENST00000591245 HMGXB3Q12766 1538 aa14□□□□□ -0.17
GIPC1-212ENST00000591245 NCAPD3P42695 1498 aa13.98□□□□□ -0.17
GIPC1-212ENST00000591245 CCDC88BA6NC98 1476 aa13.86□□□□□ -0.19
GIPC1-212ENST00000591245 PPARGC1BQ86YN6 1023 aaKnown RBP13.83□□□□□ -0.2
GIPC1-212ENST00000591245 MYT1Q01538 1121 aa13.8□□□□□ -0.2
GIPC1-212ENST00000591245 LOC105371045A0A1W2PR82 267 aa13.73□□□□□ -0.21
GIPC1-212ENST00000591245 NESP48681 1621 aa13.7□□□□□ -0.22
GIPC1-212ENST00000591245 PRDM2Q13029 1718 aa13.66□□□□□ -0.22
GIPC1-212ENST00000591245 CADPSQ9ULU8 1353 aa13.63□□□□□ -0.23
GIPC1-212ENST00000591245 LAMC3Q9Y6N6 1575 aa13.62□□□□□ -0.23
GIPC1-212ENST00000591245 CFTRP13569 1480 aa13.61□□□□□ -0.23
GIPC1-212ENST00000591245 TRIM41Q8WV44 630 aa13.61□□□□□ -0.23
GIPC1-212ENST00000591245 KIF21AQ7Z4S6 1674 aa13.59□□□□□ -0.23
GIPC1-212ENST00000591245 ABCC8Q09428 1581 aa13.58□□□□□ -0.24
GIPC1-212ENST00000591245 FANCD2Q9BXW9 1451 aa13.55□□□□□ -0.24
GIPC1-212ENST00000591245 ERCC6Q03468 1493 aa13.54□□□□□ -0.24
GIPC1-212ENST00000591245 CEP164Q9UPV0 1460 aa13.51□□□□□ -0.25
GIPC1-212ENST00000591245 PDS5BQ9NTI5 1447 aa13.51□□□□□ -0.25
GIPC1-212ENST00000591245 SCAF1Q9H7N4 1312 aaKnown RBP13.48□□□□□ -0.25
GIPC1-212ENST00000591245 CENPBP07199 599 aaPredicted RBP13.48□□□□□ -0.25
GIPC1-212ENST00000591245 WRNQ14191 1432 aaPredicted RBP eCLIP13.44□□□□□ -0.26
GIPC1-212ENST00000591245 SYNJ1O43426 1573 aa13.44□□□□□ -0.26
GIPC1-212ENST00000591245 ACIN1Q9UKV3 1341 aaKnown RBP13.42□□□□□ -0.26
GIPC1-212ENST00000591245 CUX1P39880 1505 aa13.4□□□□□ -0.26
GIPC1-212ENST00000591245 MRC2Q9UBG0 1479 aa13.4□□□□□ -0.26
GIPC1-212ENST00000591245 URB2Q14146 1524 aaKnown RBP13.39□□□□□ -0.27
GIPC1-212ENST00000591245 DNMBPQ6XZF7 1577 aa13.38□□□□□ -0.27
GIPC1-212ENST00000591245 THOC2Q8NI27 1593 aaKnown RBP13.38□□□□□ -0.27
GIPC1-212ENST00000591245 BIVM-ERCC5R4GMW8 1640 aa13.38□□□□□ -0.27
GIPC1-212ENST00000591245 TOP2BQ02880 1626 aa13.36□□□□□ -0.27
GIPC1-212ENST00000591245 TOPBP1Q92547 1522 aa13.36□□□□□ -0.27
GIPC1-212ENST00000591245 FGD5Q6ZNL6 1462 aa13.33□□□□□ -0.28
GIPC1-212ENST00000591245 EEA1Q15075 1411 aa13.32□□□□□ -0.28
GIPC1-212ENST00000591245 WDR62O43379 1518 aa13.32□□□□□ -0.28
GIPC1-212ENST00000591245 CCER1Q8TC90 406 aaPredicted RBP13.31□□□□□ -0.28
GIPC1-212ENST00000591245 FAM9AQ8IZU1 332 aaPredicted RBP13.28□□□□□ -0.28
GIPC1-212ENST00000591245 POLA1P09884 1462 aaPredicted RBP13.27□□□□□ -0.29
GIPC1-212ENST00000591245 DIEXFQ68CQ4 756 aaKnown RBP13.26□□□□□ -0.29
GIPC1-212ENST00000591245 RAD54L2Q9Y4B4 1467 aa13.26□□□□□ -0.29
GIPC1-212ENST00000591245 CLSPNQ9HAW4 1339 aa13.22□□□□□ -0.29
GIPC1-212ENST00000591245 SOGA1O94964 1423 aa13.22□□□□□ -0.29
GIPC1-212ENST00000591245 TNIKQ9UKE5 1360 aa13.2□□□□□ -0.3
GIPC1-212ENST00000591245 WDR97A6NE52 1622 aa13.2□□□□□ -0.3
GIPC1-212ENST00000591245 CUX2O14529 1486 aa13.19□□□□□ -0.3
GIPC1-212ENST00000591245 NEUROD1Q13562 356 aa13.19□□□□□ -0.3
GIPC1-212ENST00000591245 TARBP1Q13395 1621 aaKnown RBP13.18□□□□□ -0.3
GIPC1-212ENST00000591245 EHMT2Q96KQ7 1210 aa13.18□□□□□ -0.3
GIPC1-212ENST00000591245 RUSC2Q8N2Y8 1516 aa13.18□□□□□ -0.3
GIPC1-212ENST00000591245 IFT140Q96RY7 1462 aa13.16□□□□□ -0.3
GIPC1-212ENST00000591245 GTF3C3Q9Y5Q9 886 aa13.15□□□□□ -0.3
GIPC1-212ENST00000591245 ZNF316A6NFI3 1004 aaPredicted RBP13.14□□□□□ -0.31
GIPC1-212ENST00000591245 TDRD9Q8NDG6 1382 aaKnown RBP13.14□□□□□ -0.31
GIPC1-212ENST00000591245 CEP162Q5TB80 1403 aa13.13□□□□□ -0.31
GIPC1-212ENST00000591245 EIF4G3O43432 1585 aaKnown RBP13.13□□□□□ -0.31
GIPC1-212ENST00000591245 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.13□□□□□ -0.31
GIPC1-212ENST00000591245 ABCA10Q8WWZ4 1543 aa13.13□□□□□ -0.31
GIPC1-212ENST00000591245 ZNF608Q9ULD9 1512 aaPredicted RBP13.13□□□□□ -0.31
GIPC1-212ENST00000591245 KIF27Q86VH2 1401 aa13.13□□□□□ -0.31
GIPC1-212ENST00000591245 PBRM1Q86U86 1689 aa13.12□□□□□ -0.31
GIPC1-212ENST00000591245 AQRO60306 1485 aaKnown RBP eCLIP13.1□□□□□ -0.31
GIPC1-212ENST00000591245 ABCA5Q8WWZ7 1642 aa13.1□□□□□ -0.31
GIPC1-212ENST00000591245 GAPVD1Q14C86 1478 aa13.09□□□□□ -0.31
GIPC1-212ENST00000591245 GOLGA3Q08378 1498 aa13.08□□□□□ -0.32
GIPC1-212ENST00000591245 CSRNP3Q8WYN3 585 aa13.02□□□□□ -0.33
GIPC1-212ENST00000591245 KIF21BO75037 1637 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms