RNA–Protein interactions for RNA: ENST00000590930.5

CHUK-204, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 1 (best)

Gene CHUK, Length 4,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-204ENST00000590930 NISCHQ9Y2I1 1504 aa8.41□□□□□ -1.06
CHUK-204ENST00000590930 CCDC180Q9P1Z9 1646 aa7.64□□□□□ -1.19
CHUK-204ENST00000590930 DCAF1Q9Y4B6 1507 aa7.54□□□□□ -1.2
CHUK-204ENST00000590930 MYO15BQ96JP2 1530 aa7.34□□□□□ -1.23
CHUK-204ENST00000590930 ZCCHC6Q5VYS8 1495 aaKnown RBP7.32□□□□□ -1.24
CHUK-204ENST00000590930 PELP1Q8IZL8 1130 aaKnown RBP7.26□□□□□ -1.25
CHUK-204ENST00000590930 MYT1Q01538 1121 aa7.23□□□□□ -1.25
CHUK-204ENST00000590930 TTBK1Q5TCY1 1321 aaPredicted RBP7.06□□□□□ -1.28
CHUK-204ENST00000590930 ABCC9O60706 1549 aa7.04□□□□□ -1.28
CHUK-204ENST00000590930 HRCP23327 699 aa6.96□□□□□ -1.3
CHUK-204ENST00000590930 EIF4G1Q04637 1599 aaKnown RBP6.95□□□□□ -1.3
CHUK-204ENST00000590930 ZEB1P37275 1124 aaPredicted RBP6.85□□□□□ -1.31
CHUK-204ENST00000590930 RB1CC1Q8TDY2 1594 aa6.85□□□□□ -1.31
CHUK-204ENST00000590930 SHROOM4Q9ULL8 1493 aa6.83□□□□□ -1.32
CHUK-204ENST00000590930 WRNQ14191 1432 aaPredicted RBP eCLIP6.8□□□□□ -1.32
CHUK-204ENST00000590930 DCAF8L2P0C7V8 631 aa6.79□□□□□ -1.32
CHUK-204ENST00000590930 CLSPNQ9HAW4 1339 aa6.78□□□□□ -1.32
CHUK-204ENST00000590930 BAZ1AQ9NRL2 1556 aaPredicted RBP6.72□□□□□ -1.33
CHUK-204ENST00000590930 PEG3Q9GZU2 1588 aa6.71□□□□□ -1.34
CHUK-204ENST00000590930 NACADO15069 1562 aa6.7□□□□□ -1.34
CHUK-204ENST00000590930 EEA1Q15075 1411 aa6.66□□□□□ -1.34
CHUK-204ENST00000590930 KIF21BO75037 1637 aa6.63□□□□□ -1.35
CHUK-204ENST00000590930 CUX2O14529 1486 aa6.61□□□□□ -1.35
CHUK-204ENST00000590930 CHIC1Q5VXU3 224 aa6.6□□□□□ -1.35
CHUK-204ENST00000590930 TRIM26Q12899 539 aaPredicted RBP6.58□□□□□ -1.36
CHUK-204ENST00000590930 BAZ1BQ9UIG0 1483 aaKnown RBP6.56□□□□□ -1.36
CHUK-204ENST00000590930 TOP2AP11388 1531 aaKnown RBP6.55□□□□□ -1.36
CHUK-204ENST00000590930 MAP3K1Q13233 1512 aa6.54□□□□□ -1.36
CHUK-204ENST00000590930 PRDM2Q13029 1718 aa6.54□□□□□ -1.36
CHUK-204ENST00000590930 RSF1Q96T23 1441 aaPredicted RBP6.51□□□□□ -1.37
CHUK-204ENST00000590930 SMARCA2P51531 1590 aa6.51□□□□□ -1.37
CHUK-204ENST00000590930 BIVM-ERCC5R4GMW8 1640 aa6.49□□□□□ -1.37
CHUK-204ENST00000590930 ERICH3Q5RHP9 1530 aa6.48□□□□□ -1.37
CHUK-204ENST00000590930 GOLGA3Q08378 1498 aa6.47□□□□□ -1.37
CHUK-204ENST00000590930 POLR1AO95602 1720 aaPredicted RBP6.41□□□□□ -1.38
CHUK-204ENST00000590930 SMARCA4P51532 1647 aa6.41□□□□□ -1.38
CHUK-204ENST00000590930 KIF21AQ7Z4S6 1674 aa6.41□□□□□ -1.38
CHUK-204ENST00000590930 TNIKQ9UKE5 1360 aa6.4□□□□□ -1.38
CHUK-204ENST00000590930 SYNJ1O43426 1573 aa6.4□□□□□ -1.39
CHUK-204ENST00000590930 ACIN1Q9UKV3 1341 aaKnown RBP6.36□□□□□ -1.39
CHUK-204ENST00000590930 CFAP43Q8NDM7 1665 aa6.36□□□□□ -1.39
CHUK-204ENST00000590930 UNC13AQ9UPW8 1703 aa6.36□□□□□ -1.39
CHUK-204ENST00000590930 TRIM41Q8WV44 630 aa6.36□□□□□ -1.39
CHUK-204ENST00000590930 ABCA5Q8WWZ7 1642 aa6.35□□□□□ -1.39
CHUK-204ENST00000590930 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.34□□□□□ -1.39
CHUK-204ENST00000590930 MYT1LQ9UL68 1186 aa6.34□□□□□ -1.4
CHUK-204ENST00000590930 SCAF1Q9H7N4 1312 aaKnown RBP6.33□□□□□ -1.4
CHUK-204ENST00000590930 TOP2BQ02880 1626 aa6.33□□□□□ -1.4
CHUK-204ENST00000590930 THOC2Q8NI27 1593 aaKnown RBP6.31□□□□□ -1.4
CHUK-204ENST00000590930 CEP164Q9UPV0 1460 aa6.3□□□□□ -1.4
CHUK-204ENST00000590930 RRBP1Q9P2E9 1410 aaKnown RBP6.29□□□□□ -1.4
CHUK-204ENST00000590930 HMGXB3Q12766 1538 aa6.28□□□□□ -1.4
CHUK-204ENST00000590930 MROH2BQ7Z745 1585 aa6.27□□□□□ -1.41
CHUK-204ENST00000590930 WIZO95785 1651 aa6.27□□□□□ -1.41
CHUK-204ENST00000590930 CENPBP07199 599 aaPredicted RBP6.27□□□□□ -1.41
CHUK-204ENST00000590930 ZMYM4Q5VZL5 1548 aa6.27□□□□□ -1.41
CHUK-204ENST00000590930 AQRO60306 1485 aaKnown RBP eCLIP6.25□□□□□ -1.41
CHUK-204ENST00000590930 WDR97A6NE52 1622 aa6.24□□□□□ -1.41
CHUK-204ENST00000590930 ERICH6BQ5W0A0 696 aa6.23□□□□□ -1.41
CHUK-204ENST00000590930 TIMELESSQ9UNS1 1208 aa6.23□□□□□ -1.41
CHUK-204ENST00000590930 FAM9AQ8IZU1 332 aaPredicted RBP6.23□□□□□ -1.41
CHUK-204ENST00000590930 VPS8Q8N3P4 1428 aa6.22□□□□□ -1.41
CHUK-204ENST00000590930 SCRIBQ14160 1630 aa6.21□□□□□ -1.42
CHUK-204ENST00000590930 CCDC144AA2RUR9 1427 aa6.21□□□□□ -1.42
CHUK-204ENST00000590930 NCAPD3P42695 1498 aa6.2□□□□□ -1.42
CHUK-204ENST00000590930 AKNAQ7Z591 1439 aa6.2□□□□□ -1.42
CHUK-204ENST00000590930 GCC2Q8IWJ2 1684 aa6.2□□□□□ -1.42
CHUK-204ENST00000590930 PRXQ9BXM0 1461 aa6.19□□□□□ -1.42
CHUK-204ENST00000590930 CEP162Q5TB80 1403 aa6.19□□□□□ -1.42
CHUK-204ENST00000590930 EFCAB5A4FU69 1503 aa6.18□□□□□ -1.42
CHUK-204ENST00000590930 INSRP06213 1382 aa6.18□□□□□ -1.42
CHUK-204ENST00000590930 CC2D2AQ9P2K1 1620 aa6.18□□□□□ -1.42
CHUK-204ENST00000590930 HECW1Q76N89 1606 aa6.17□□□□□ -1.42
CHUK-204ENST00000590930 APLP2Q06481 763 aa6.15□□□□□ -1.42
CHUK-204ENST00000590930 PCGF6Q9BYE7 350 aa6.15□□□□□ -1.43
CHUK-204ENST00000590930 CUL7Q14999 1698 aa6.14□□□□□ -1.43
CHUK-204ENST00000590930 CCDC88BA6NC98 1476 aa6.14□□□□□ -1.43
CHUK-204ENST00000590930 BICRAQ9NZM4 1560 aa6.14□□□□□ -1.43
CHUK-204ENST00000590930 CCDC18Q5T9S5 1454 aa6.14□□□□□ -1.43
CHUK-204ENST00000590930 ARHGEF11O15085 1522 aa6.14□□□□□ -1.43
CHUK-204ENST00000590930 ERICH6Q7L0X2 663 aa6.13□□□□□ -1.43
CHUK-204ENST00000590930 LAMC1P11047 1609 aa6.13□□□□□ -1.43
CHUK-204ENST00000590930 PABPN1Q86U42 306 aaKnown RBP eCLIP6.12□□□□□ -1.43
CHUK-204ENST00000590930 NCOA2Q15596 1464 aa6.12□□□□□ -1.43
CHUK-204ENST00000590930 TIAM1Q13009 1591 aa6.12□□□□□ -1.43
CHUK-204ENST00000590930 CTTNBP2Q8WZ74 1663 aa6.11□□□□□ -1.43
CHUK-204ENST00000590930 ZNF316A6NFI3 1004 aaPredicted RBP6.11□□□□□ -1.43
CHUK-204ENST00000590930 MAPKBP1O60336 1514 aa6.11□□□□□ -1.43
CHUK-204ENST00000590930 FANCIQ9NVI1 1328 aa6.11□□□□□ -1.43
CHUK-204ENST00000590930 SAMD9Q5K651 1589 aa6.09□□□□□ -1.43
CHUK-204ENST00000590930 ARAP1Q96P48 1450 aa6.09□□□□□ -1.43
CHUK-204ENST00000590930 ANP32EQ9BTT0 268 aa6.08□□□□□ -1.44
CHUK-204ENST00000590930 KDM5BQ9UGL1 1544 aa6.08□□□□□ -1.44
CHUK-204ENST00000590930 E9PCH4 1651 aa6.07□□□□□ -1.44
CHUK-204ENST00000590930 CLIP1P30622 1438 aa6.07□□□□□ -1.44
CHUK-204ENST00000590930 TCOF1Q13428 1488 aaKnown RBP6.07□□□□□ -1.44
CHUK-204ENST00000590930 VIRMAQ69YN4 1812 aaKnown RBP6.07□□□□□ -1.44
CHUK-204ENST00000590930 CUX1P39880 1505 aa6.06□□□□□ -1.44
CHUK-204ENST00000590930 CCER2I3L3R5 266 aa6.06□□□□□ -1.44
CHUK-204ENST00000590930 NEUROD1Q13562 356 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 200.8 ms