RNA–Protein interactions for RNA: ENST00000589204.1

ALPK2-204, Transcript of alpha kinase 2, humanhuman

TSL 2

Gene ALPK2, Length 2,773 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK2-204ENST00000589204 NISCHQ9Y2I1 1504 aa30.01■■■□□ 2.39
ALPK2-204ENST00000589204 CCDC180Q9P1Z9 1646 aa25.97■■□□□ 1.75
ALPK2-204ENST00000589204 ZCCHC6Q5VYS8 1495 aaKnown RBP25.35■■□□□ 1.65
ALPK2-204ENST00000589204 SHROOM4Q9ULL8 1493 aa24.92■■□□□ 1.58
ALPK2-204ENST00000589204 DCAF1Q9Y4B6 1507 aa24.81■■□□□ 1.56
ALPK2-204ENST00000589204 DCAF8L2P0C7V8 631 aa24.56■■□□□ 1.52
ALPK2-204ENST00000589204 MYO15BQ96JP2 1530 aa24.28■■□□□ 1.48
ALPK2-204ENST00000589204 SUPT5HO00267 1087 aaKnown RBP24.25■■□□□ 1.47
ALPK2-204ENST00000589204 NACADO15069 1562 aa23.99■■□□□ 1.43
ALPK2-204ENST00000589204 SCRIBQ14160 1630 aa23.97■■□□□ 1.43
ALPK2-204ENST00000589204 ABCC9O60706 1549 aa23.96■■□□□ 1.43
ALPK2-204ENST00000589204 RB1CC1Q8TDY2 1594 aa23.67■■□□□ 1.38
ALPK2-204ENST00000589204 CHIC1Q5VXU3 224 aa23.49■■□□□ 1.35
ALPK2-204ENST00000589204 RSF1Q96T23 1441 aaPredicted RBP23.49■■□□□ 1.35
ALPK2-204ENST00000589204 UNC13AQ9UPW8 1703 aa23.3■■□□□ 1.32
ALPK2-204ENST00000589204 CECR2Q9BXF3 1484 aa23.26■■□□□ 1.31
ALPK2-204ENST00000589204 MROH2BQ7Z745 1585 aa23.22■■□□□ 1.31
ALPK2-204ENST00000589204 BAZ1AQ9NRL2 1556 aaPredicted RBP23.15■■□□□ 1.3
ALPK2-204ENST00000589204 WIZO95785 1651 aa23.12■■□□□ 1.29
ALPK2-204ENST00000589204 SMARCA4P51532 1647 aa23■■□□□ 1.27
ALPK2-204ENST00000589204 BICRAQ9NZM4 1560 aa22.93■■□□□ 1.26
ALPK2-204ENST00000589204 TOP2AP11388 1531 aaKnown RBP22.87■■□□□ 1.25
ALPK2-204ENST00000589204 EIF4G1Q04637 1599 aaKnown RBP22.76■■□□□ 1.23
ALPK2-204ENST00000589204 TRIM41Q8WV44 630 aa22.74■■□□□ 1.23
ALPK2-204ENST00000589204 SMARCA2P51531 1590 aa22.68■■□□□ 1.22
ALPK2-204ENST00000589204 PABPN1Q86U42 306 aaKnown RBP eCLIP22.67■■□□□ 1.22
ALPK2-204ENST00000589204 PEG3Q9GZU2 1588 aa22.66■■□□□ 1.22
ALPK2-204ENST00000589204 LOC105371045A0A1W2PR82 267 aa22.62■■□□□ 1.21
ALPK2-204ENST00000589204 CCDC88BA6NC98 1476 aa22.6■■□□□ 1.21
ALPK2-204ENST00000589204 ATAD2BQ9ULI0 1458 aa22.4■■□□□ 1.18
ALPK2-204ENST00000589204 ABCC8Q09428 1581 aa22.38■■□□□ 1.17
ALPK2-204ENST00000589204 FAM9AQ8IZU1 332 aaPredicted RBP22.36■■□□□ 1.17
ALPK2-204ENST00000589204 BAZ1BQ9UIG0 1483 aaKnown RBP22.35■■□□□ 1.17
ALPK2-204ENST00000589204 PCGF6Q9BYE7 350 aa22.25■■□□□ 1.15
ALPK2-204ENST00000589204 HMGXB3Q12766 1538 aa22.17■■□□□ 1.14
ALPK2-204ENST00000589204 EEA1Q15075 1411 aa22.13■■□□□ 1.13
ALPK2-204ENST00000589204 WRNQ14191 1432 aaPredicted RBP eCLIP22.12■■□□□ 1.13
ALPK2-204ENST00000589204 HRCP23327 699 aa22.11■■□□□ 1.13
ALPK2-204ENST00000589204 TRIM26Q12899 539 aaPredicted RBP22.1■■□□□ 1.13
ALPK2-204ENST00000589204 NCAPD3P42695 1498 aa22.09■■□□□ 1.13
ALPK2-204ENST00000589204 SYNJ1O43426 1573 aa22.05■■□□□ 1.12
ALPK2-204ENST00000589204 EHMT2Q96KQ7 1210 aa22.04■■□□□ 1.12
ALPK2-204ENST00000589204 SOGA1O94964 1423 aa22.02■■□□□ 1.12
ALPK2-204ENST00000589204 TOP2BQ02880 1626 aa21.91■■□□□ 1.1
ALPK2-204ENST00000589204 RUSC2Q8N2Y8 1516 aa21.91■■□□□ 1.1
ALPK2-204ENST00000589204 BIVM-ERCC5R4GMW8 1640 aa21.9■■□□□ 1.1
ALPK2-204ENST00000589204 CSRNP3Q8WYN3 585 aa21.89■■□□□ 1.09
ALPK2-204ENST00000589204 PRDM2Q13029 1718 aa21.87■■□□□ 1.09
ALPK2-204ENST00000589204 TNIKQ9UKE5 1360 aa21.87■■□□□ 1.09
ALPK2-204ENST00000589204 GOLGA3Q08378 1498 aa21.87■■□□□ 1.09
ALPK2-204ENST00000589204 KIF21BO75037 1637 aa21.86■■□□□ 1.09
ALPK2-204ENST00000589204 CEP162Q5TB80 1403 aa21.83■■□□□ 1.09
ALPK2-204ENST00000589204 CEP164Q9UPV0 1460 aa21.8■■□□□ 1.08
ALPK2-204ENST00000589204 CFTRP13569 1480 aa21.78■■□□□ 1.08
ALPK2-204ENST00000589204 CC2D2AQ9P2K1 1620 aa21.73■■□□□ 1.07
ALPK2-204ENST00000589204 UBTFP17480 764 aaKnown RBP21.69■■□□□ 1.06
ALPK2-204ENST00000589204 CUX1P39880 1505 aa21.68■■□□□ 1.06
ALPK2-204ENST00000589204 ERICH3Q5RHP9 1530 aa21.58■■□□□ 1.04
ALPK2-204ENST00000589204 RAPGEF2Q9Y4G8 1499 aa21.57■■□□□ 1.04
ALPK2-204ENST00000589204 CADPSQ9ULU8 1353 aa21.56■■□□□ 1.04
ALPK2-204ENST00000589204 ZEB1P37275 1124 aaPredicted RBP21.55■■□□□ 1.04
ALPK2-204ENST00000589204 PPARGC1BQ86YN6 1023 aaKnown RBP21.53■■□□□ 1.04
ALPK2-204ENST00000589204 CLIP1P30622 1438 aa21.52■■□□□ 1.04
ALPK2-204ENST00000589204 KIF27Q86VH2 1401 aa21.5■■□□□ 1.03
ALPK2-204ENST00000589204 PRXQ9BXM0 1461 aa21.49■■□□□ 1.03
ALPK2-204ENST00000589204 VPS8Q8N3P4 1428 aa21.42■■□□□ 1.02
ALPK2-204ENST00000589204 FANCD2Q9BXW9 1451 aa21.38■■□□□ 1.01
ALPK2-204ENST00000589204 FGD5Q6ZNL6 1462 aa21.36■■□□□ 1.01
ALPK2-204ENST00000589204 DNMBPQ6XZF7 1577 aa21.33■■□□□ 1
ALPK2-204ENST00000589204 CUX2O14529 1486 aa21.32■■□□□ 1
ALPK2-204ENST00000589204 LAMC3Q9Y6N6 1575 aa21.31■■□□□ 1
ALPK2-204ENST00000589204 TTBK1Q5TCY1 1321 aaPredicted RBP21.28■■□□□ 1
ALPK2-204ENST00000589204 ARAP1Q96P48 1450 aa21.24■□□□□ 0.99
ALPK2-204ENST00000589204 NESP48681 1621 aa21.23■□□□□ 0.99
ALPK2-204ENST00000589204 TOPBP1Q92547 1522 aa21.22■□□□□ 0.99
ALPK2-204ENST00000589204 APLP2Q06481 763 aa21.21■□□□□ 0.99
ALPK2-204ENST00000589204 IGF1RP08069 1367 aa21.2■□□□□ 0.98
ALPK2-204ENST00000589204 RANGAP1P46060 587 aaPredicted RBP21.17■□□□□ 0.98
ALPK2-204ENST00000589204 ABCA10Q8WWZ4 1543 aa21.17■□□□□ 0.98
ALPK2-204ENST00000589204 POLA1P09884 1462 aaPredicted RBP21.15■□□□□ 0.98
ALPK2-204ENST00000589204 CCER1Q8TC90 406 aaPredicted RBP21.14■□□□□ 0.98
ALPK2-204ENST00000589204 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.14■□□□□ 0.97
ALPK2-204ENST00000589204 WDR97A6NE52 1622 aa21.13■□□□□ 0.97
ALPK2-204ENST00000589204 CARMIL1Q5VZK9 1371 aa21.13■□□□□ 0.97
ALPK2-204ENST00000589204 ARHGAP35Q9NRY4 1499 aa21.12■□□□□ 0.97
ALPK2-204ENST00000589204 CUL7Q14999 1698 aa21.11■□□□□ 0.97
ALPK2-204ENST00000589204 RAD54L2Q9Y4B4 1467 aa21.08■□□□□ 0.97
ALPK2-204ENST00000589204 PDS5BQ9NTI5 1447 aa21.08■□□□□ 0.96
ALPK2-204ENST00000589204 URB2Q14146 1524 aaKnown RBP21.07■□□□□ 0.96
ALPK2-204ENST00000589204 KIF21AQ7Z4S6 1674 aa21.06■□□□□ 0.96
ALPK2-204ENST00000589204 CTTNBP2Q8WZ74 1663 aa21.01■□□□□ 0.95
ALPK2-204ENST00000589204 ABCA5Q8WWZ7 1642 aa21■□□□□ 0.95
ALPK2-204ENST00000589204 MAP3K1Q13233 1512 aa20.94■□□□□ 0.94
ALPK2-204ENST00000589204 EFCAB5A4FU69 1503 aa20.93■□□□□ 0.94
ALPK2-204ENST00000589204 TIAM1Q13009 1591 aa20.91■□□□□ 0.94
ALPK2-204ENST00000589204 HNRNPUL2Q1KMD3 747 aaKnown RBP20.9■□□□□ 0.94
ALPK2-204ENST00000589204 FHAD1B1AJZ9 1412 aa20.89■□□□□ 0.94
ALPK2-204ENST00000589204 CFAP43Q8NDM7 1665 aa20.89■□□□□ 0.93
ALPK2-204ENST00000589204 TARBP1Q13395 1621 aaKnown RBP20.87■□□□□ 0.93
ALPK2-204ENST00000589204 KANK4Q5T7N3 995 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms