RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 NISCHQ9Y2I1 1504 aa27.47■■□□□ 1.99
CCBE1-203ENST00000589116 CCDC180Q9P1Z9 1646 aa24.06■■□□□ 1.44
CCBE1-203ENST00000589116 ABCC9O60706 1549 aa23.92■■□□□ 1.42
CCBE1-203ENST00000589116 ZCCHC6Q5VYS8 1495 aaKnown RBP23.1■■□□□ 1.29
CCBE1-203ENST00000589116 DNAJC5BQ9UF47 199 aa23.04■■□□□ 1.28
CCBE1-203ENST00000589116 DCAF1Q9Y4B6 1507 aa22.8■■□□□ 1.24
CCBE1-203ENST00000589116 MYO15BQ96JP2 1530 aa22.56■■□□□ 1.2
CCBE1-203ENST00000589116 DCAF8L2P0C7V8 631 aa22.52■■□□□ 1.2
CCBE1-203ENST00000589116 RB1CC1Q8TDY2 1594 aa22.42■■□□□ 1.18
CCBE1-203ENST00000589116 NACADO15069 1562 aa22.38■■□□□ 1.17
CCBE1-203ENST00000589116 SHROOM4Q9ULL8 1493 aa22.24■■□□□ 1.15
CCBE1-203ENST00000589116 PABPN1Q86U42 306 aaKnown RBP eCLIP22.14■■□□□ 1.14
CCBE1-203ENST00000589116 SCRIBQ14160 1630 aa22.01■■□□□ 1.11
CCBE1-203ENST00000589116 UNC13AQ9UPW8 1703 aa21.85■■□□□ 1.09
CCBE1-203ENST00000589116 DNAJC5Q9H3Z4 198 aa21.75■■□□□ 1.07
CCBE1-203ENST00000589116 BICRAQ9NZM4 1560 aa21.73■■□□□ 1.07
CCBE1-203ENST00000589116 CECR2Q9BXF3 1484 aa21.61■■□□□ 1.05
CCBE1-203ENST00000589116 CC2D2AQ9P2K1 1620 aa21.54■■□□□ 1.04
CCBE1-203ENST00000589116 SUPT5HO00267 1087 aaKnown RBP21.38■■□□□ 1.01
CCBE1-203ENST00000589116 EIF4G1Q04637 1599 aaKnown RBP21.3■■□□□ 1
CCBE1-203ENST00000589116 RSF1Q96T23 1441 aaPredicted RBP21.27■■□□□ 1
CCBE1-203ENST00000589116 BAZ1AQ9NRL2 1556 aaPredicted RBP21.25■□□□□ 0.99
CCBE1-203ENST00000589116 MROH2BQ7Z745 1585 aa21.19■□□□□ 0.98
CCBE1-203ENST00000589116 SMARCA4P51532 1647 aa21.14■□□□□ 0.98
CCBE1-203ENST00000589116 WIZO95785 1651 aa21.02■□□□□ 0.95
CCBE1-203ENST00000589116 PEG3Q9GZU2 1588 aa20.93■□□□□ 0.94
CCBE1-203ENST00000589116 CUX2O14529 1486 aa20.92■□□□□ 0.94
CCBE1-203ENST00000589116 TOP2AP11388 1531 aaKnown RBP20.86■□□□□ 0.93
CCBE1-203ENST00000589116 SMARCA2P51531 1590 aa20.82■□□□□ 0.92
CCBE1-203ENST00000589116 ATAD2BQ9ULI0 1458 aa20.77■□□□□ 0.92
CCBE1-203ENST00000589116 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
CCBE1-203ENST00000589116 BAZ1BQ9UIG0 1483 aaKnown RBP20.67■□□□□ 0.9
CCBE1-203ENST00000589116 HMGXB3Q12766 1538 aa20.64■□□□□ 0.89
CCBE1-203ENST00000589116 NCAPD3P42695 1498 aa20.63■□□□□ 0.89
CCBE1-203ENST00000589116 CCDC88BA6NC98 1476 aa20.58■□□□□ 0.89
CCBE1-203ENST00000589116 TRIM41Q8WV44 630 aa20.57■□□□□ 0.88
CCBE1-203ENST00000589116 CHIC1Q5VXU3 224 aa20.51■□□□□ 0.87
CCBE1-203ENST00000589116 NESP48681 1621 aa20.3■□□□□ 0.84
CCBE1-203ENST00000589116 THOC2Q8NI27 1593 aaKnown RBP20.24■□□□□ 0.83
CCBE1-203ENST00000589116 CFTRP13569 1480 aa20.15■□□□□ 0.82
CCBE1-203ENST00000589116 PRDM2Q13029 1718 aa20.13■□□□□ 0.81
CCBE1-203ENST00000589116 ABCC8Q09428 1581 aa20.12■□□□□ 0.81
CCBE1-203ENST00000589116 CADPSQ9ULU8 1353 aa20.07■□□□□ 0.8
CCBE1-203ENST00000589116 LAMC3Q9Y6N6 1575 aa20.04■□□□□ 0.8
CCBE1-203ENST00000589116 WRNQ14191 1432 aaPredicted RBP eCLIP20.04■□□□□ 0.8
CCBE1-203ENST00000589116 KIF21AQ7Z4S6 1674 aa20.01■□□□□ 0.79
CCBE1-203ENST00000589116 PDS5BQ9NTI5 1447 aa19.98■□□□□ 0.79
CCBE1-203ENST00000589116 SYNJ1O43426 1573 aa19.95■□□□□ 0.78
CCBE1-203ENST00000589116 TOP2BQ02880 1626 aa19.92■□□□□ 0.78
CCBE1-203ENST00000589116 BIVM-ERCC5R4GMW8 1640 aa19.91■□□□□ 0.78
CCBE1-203ENST00000589116 FANCD2Q9BXW9 1451 aa19.84■□□□□ 0.77
CCBE1-203ENST00000589116 MRC2Q9UBG0 1479 aa19.84■□□□□ 0.77
CCBE1-203ENST00000589116 OSCARQ8IYS5 282 aa19.84■□□□□ 0.77
CCBE1-203ENST00000589116 CUX1P39880 1505 aa19.82■□□□□ 0.76
CCBE1-203ENST00000589116 EEA1Q15075 1411 aa19.8■□□□□ 0.76
CCBE1-203ENST00000589116 WDR62O43379 1518 aa19.79■□□□□ 0.76
CCBE1-203ENST00000589116 CEP164Q9UPV0 1460 aa19.75■□□□□ 0.75
CCBE1-203ENST00000589116 SOGA1O94964 1423 aa19.72■□□□□ 0.75
CCBE1-203ENST00000589116 FAM9AQ8IZU1 332 aaPredicted RBP19.71■□□□□ 0.75
CCBE1-203ENST00000589116 DNMBPQ6XZF7 1577 aa19.71■□□□□ 0.75
CCBE1-203ENST00000589116 RIMBP3CA6NJZ7 1639 aa19.66■□□□□ 0.74
CCBE1-203ENST00000589116 RIMBP3BA6NNM3 1639 aa19.66■□□□□ 0.74
CCBE1-203ENST00000589116 RIMBP3Q9UFD9 1639 aa19.66■□□□□ 0.74
CCBE1-203ENST00000589116 TOPBP1Q92547 1522 aa19.64■□□□□ 0.73
CCBE1-203ENST00000589116 LOC105371045A0A1W2PR82 267 aa19.64■□□□□ 0.73
CCBE1-203ENST00000589116 RUSC2Q8N2Y8 1516 aa19.63■□□□□ 0.73
CCBE1-203ENST00000589116 FGD5Q6ZNL6 1462 aa19.61■□□□□ 0.73
CCBE1-203ENST00000589116 URB2Q14146 1524 aaKnown RBP19.59■□□□□ 0.73
CCBE1-203ENST00000589116 CSRNP3Q8WYN3 585 aa19.59■□□□□ 0.73
CCBE1-203ENST00000589116 AEBP2Q6ZN18 517 aaPredicted RBP19.56■□□□□ 0.72
CCBE1-203ENST00000589116 KIF27Q86VH2 1401 aa19.55■□□□□ 0.72
CCBE1-203ENST00000589116 KIF21BO75037 1637 aa19.54■□□□□ 0.72
CCBE1-203ENST00000589116 POLA1P09884 1462 aaPredicted RBP19.54■□□□□ 0.72
CCBE1-203ENST00000589116 TRHP20396 242 aaPredicted RBP19.53■□□□□ 0.72
CCBE1-203ENST00000589116 ARHGEF11O15085 1522 aa19.52■□□□□ 0.72
CCBE1-203ENST00000589116 GOLGA3Q08378 1498 aa19.48■□□□□ 0.71
CCBE1-203ENST00000589116 ABCA10Q8WWZ4 1543 aa19.48■□□□□ 0.71
CCBE1-203ENST00000589116 CYB5RLQ6IPT4 315 aa19.45■□□□□ 0.7
CCBE1-203ENST00000589116 WDR97A6NE52 1622 aa19.45■□□□□ 0.7
CCBE1-203ENST00000589116 RAD54L2Q9Y4B4 1467 aa19.42■□□□□ 0.7
CCBE1-203ENST00000589116 ERICH3Q5RHP9 1530 aa19.42■□□□□ 0.7
CCBE1-203ENST00000589116 PRXQ9BXM0 1461 aa19.41■□□□□ 0.7
CCBE1-203ENST00000589116 TNIKQ9UKE5 1360 aa19.4■□□□□ 0.7
CCBE1-203ENST00000589116 EHMT2Q96KQ7 1210 aa19.37■□□□□ 0.69
CCBE1-203ENST00000589116 TARBP1Q13395 1621 aaKnown RBP19.36■□□□□ 0.69
CCBE1-203ENST00000589116 RAPGEF2Q9Y4G8 1499 aa19.34■□□□□ 0.69
CCBE1-203ENST00000589116 ABCA5Q8WWZ7 1642 aa19.34■□□□□ 0.69
CCBE1-203ENST00000589116 IGF1RP08069 1367 aa19.33■□□□□ 0.69
CCBE1-203ENST00000589116 UBTFP17480 764 aaKnown RBP19.3■□□□□ 0.68
CCBE1-203ENST00000589116 CUL7Q14999 1698 aa19.29■□□□□ 0.68
CCBE1-203ENST00000589116 IFT140Q96RY7 1462 aa19.29■□□□□ 0.68
CCBE1-203ENST00000589116 CEP162Q5TB80 1403 aa19.27■□□□□ 0.68
CCBE1-203ENST00000589116 ZNF608Q9ULD9 1512 aaPredicted RBP19.27■□□□□ 0.68
CCBE1-203ENST00000589116 ARAP1Q96P48 1450 aa19.27■□□□□ 0.67
CCBE1-203ENST00000589116 GAPVD1Q14C86 1478 aa19.25■□□□□ 0.67
CCBE1-203ENST00000589116 CARMIL1Q5VZK9 1371 aa19.25■□□□□ 0.67
CCBE1-203ENST00000589116 TDRD9Q8NDG6 1382 aaKnown RBP19.22■□□□□ 0.67
CCBE1-203ENST00000589116 PBRM1Q86U86 1689 aa19.19■□□□□ 0.66
CCBE1-203ENST00000589116 EIF4G3O43432 1585 aaKnown RBP19.14■□□□□ 0.65
CCBE1-203ENST00000589116 CLIP1P30622 1438 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms