RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 NISCHQ9Y2I1 1504 aa34.6■■■■□ 3.13
CNN1-208ENST00000588935 CCDC180Q9P1Z9 1646 aa30.52■■■□□ 2.48
CNN1-208ENST00000588935 ABCC9O60706 1549 aa29.76■■■□□ 2.36
CNN1-208ENST00000588935 DCAF8L2P0C7V8 631 aa29.11■■■□□ 2.25
CNN1-208ENST00000588935 ZCCHC6Q5VYS8 1495 aaKnown RBP28.85■■■□□ 2.21
CNN1-208ENST00000588935 NACADO15069 1562 aa28.65■■■□□ 2.18
CNN1-208ENST00000588935 RB1CC1Q8TDY2 1594 aa28.64■■■□□ 2.18
CNN1-208ENST00000588935 DCAF1Q9Y4B6 1507 aa28.52■■■□□ 2.16
CNN1-208ENST00000588935 MYO15BQ96JP2 1530 aa28.48■■■□□ 2.15
CNN1-208ENST00000588935 SCRIBQ14160 1630 aa28.05■■■□□ 2.08
CNN1-208ENST00000588935 UNC13AQ9UPW8 1703 aa28.05■■■□□ 2.08
CNN1-208ENST00000588935 PABPN1Q86U42 306 aaKnown RBP eCLIP27.97■■■□□ 2.07
CNN1-208ENST00000588935 SHROOM4Q9ULL8 1493 aa27.8■■■□□ 2.04
CNN1-208ENST00000588935 BICRAQ9NZM4 1560 aa27.77■■■□□ 2.04
CNN1-208ENST00000588935 DNAJC5BQ9UF47 199 aa27.07■■□□□ 1.92
CNN1-208ENST00000588935 EIF4G1Q04637 1599 aaKnown RBP27.01■■□□□ 1.92
CNN1-208ENST00000588935 CECR2Q9BXF3 1484 aa27.01■■□□□ 1.91
CNN1-208ENST00000588935 CC2D2AQ9P2K1 1620 aa26.87■■□□□ 1.89
CNN1-208ENST00000588935 SMARCA4P51532 1647 aa26.78■■□□□ 1.88
CNN1-208ENST00000588935 BAZ1AQ9NRL2 1556 aaPredicted RBP26.77■■□□□ 1.88
CNN1-208ENST00000588935 MROH2BQ7Z745 1585 aa26.73■■□□□ 1.87
CNN1-208ENST00000588935 ATAD2BQ9ULI0 1458 aa26.56■■□□□ 1.84
CNN1-208ENST00000588935 RSF1Q96T23 1441 aaPredicted RBP26.53■■□□□ 1.84
CNN1-208ENST00000588935 SMARCA2P51531 1590 aa26.5■■□□□ 1.83
CNN1-208ENST00000588935 WIZO95785 1651 aa26.49■■□□□ 1.83
CNN1-208ENST00000588935 NCAPD3P42695 1498 aa26.45■■□□□ 1.82
CNN1-208ENST00000588935 PEG3Q9GZU2 1588 aa26.4■■□□□ 1.82
CNN1-208ENST00000588935 BAZ1BQ9UIG0 1483 aaKnown RBP26.38■■□□□ 1.81
CNN1-208ENST00000588935 SUPT5HO00267 1087 aaKnown RBP26.35■■□□□ 1.81
CNN1-208ENST00000588935 HMGXB3Q12766 1538 aa26.3■■□□□ 1.8
CNN1-208ENST00000588935 TOP2AP11388 1531 aaKnown RBP26.13■■□□□ 1.77
CNN1-208ENST00000588935 CCDC88BA6NC98 1476 aa25.9■■□□□ 1.74
CNN1-208ENST00000588935 NESP48681 1621 aa25.85■■□□□ 1.73
CNN1-208ENST00000588935 CADPSQ9ULU8 1353 aa25.75■■□□□ 1.71
CNN1-208ENST00000588935 LAMC3Q9Y6N6 1575 aa25.69■■□□□ 1.7
CNN1-208ENST00000588935 CFTRP13569 1480 aa25.62■■□□□ 1.69
CNN1-208ENST00000588935 ERCC6Q03468 1493 aa25.6■■□□□ 1.69
CNN1-208ENST00000588935 PDS5BQ9NTI5 1447 aa25.55■■□□□ 1.68
CNN1-208ENST00000588935 KIF21AQ7Z4S6 1674 aa25.51■■□□□ 1.67
CNN1-208ENST00000588935 FANCD2Q9BXW9 1451 aa25.47■■□□□ 1.67
CNN1-208ENST00000588935 PRDM2Q13029 1718 aa25.45■■□□□ 1.66
CNN1-208ENST00000588935 CEP164Q9UPV0 1460 aa25.39■■□□□ 1.65
CNN1-208ENST00000588935 MRC2Q9UBG0 1479 aa25.27■■□□□ 1.64
CNN1-208ENST00000588935 THOC2Q8NI27 1593 aaKnown RBP25.25■■□□□ 1.63
CNN1-208ENST00000588935 URB2Q14146 1524 aaKnown RBP25.19■■□□□ 1.62
CNN1-208ENST00000588935 WDR62O43379 1518 aa25.13■■□□□ 1.61
CNN1-208ENST00000588935 ABCC8Q09428 1581 aa25.1■■□□□ 1.61
CNN1-208ENST00000588935 TOPBP1Q92547 1522 aa25.1■■□□□ 1.61
CNN1-208ENST00000588935 CUX2O14529 1486 aa25.08■■□□□ 1.6
CNN1-208ENST00000588935 DNMBPQ6XZF7 1577 aa25.05■■□□□ 1.6
CNN1-208ENST00000588935 CUX1P39880 1505 aa25.04■■□□□ 1.6
CNN1-208ENST00000588935 WRNQ14191 1432 aaPredicted RBP eCLIP25.02■■□□□ 1.6
CNN1-208ENST00000588935 SYNJ1O43426 1573 aa24.93■■□□□ 1.58
CNN1-208ENST00000588935 FGD5Q6ZNL6 1462 aa24.91■■□□□ 1.58
CNN1-208ENST00000588935 POLA1P09884 1462 aaPredicted RBP24.89■■□□□ 1.58
CNN1-208ENST00000588935 RAD54L2Q9Y4B4 1467 aa24.88■■□□□ 1.57
CNN1-208ENST00000588935 SOGA1O94964 1423 aa24.86■■□□□ 1.57
CNN1-208ENST00000588935 TOP2BQ02880 1626 aa24.86■■□□□ 1.57
CNN1-208ENST00000588935 BIVM-ERCC5R4GMW8 1640 aa24.85■■□□□ 1.57
CNN1-208ENST00000588935 IFT140Q96RY7 1462 aa24.83■■□□□ 1.56
CNN1-208ENST00000588935 TRIM41Q8WV44 630 aa24.79■■□□□ 1.56
CNN1-208ENST00000588935 TARBP1Q13395 1621 aaKnown RBP24.76■■□□□ 1.55
CNN1-208ENST00000588935 ZNF608Q9ULD9 1512 aaPredicted RBP24.76■■□□□ 1.55
CNN1-208ENST00000588935 TDRD9Q8NDG6 1382 aaKnown RBP24.73■■□□□ 1.55
CNN1-208ENST00000588935 AQRO60306 1485 aaKnown RBP eCLIP24.7■■□□□ 1.54
CNN1-208ENST00000588935 CHIC1Q5VXU3 224 aa24.69■■□□□ 1.54
CNN1-208ENST00000588935 ABCA10Q8WWZ4 1543 aa24.62■■□□□ 1.53
CNN1-208ENST00000588935 EIF4G3O43432 1585 aaKnown RBP24.61■■□□□ 1.53
CNN1-208ENST00000588935 WDR97A6NE52 1622 aa24.61■■□□□ 1.53
CNN1-208ENST00000588935 GAPVD1Q14C86 1478 aa24.55■■□□□ 1.52
CNN1-208ENST00000588935 ABCA5Q8WWZ7 1642 aa24.49■■□□□ 1.51
CNN1-208ENST00000588935 GRIN2BQ13224 1484 aa24.47■■□□□ 1.51
CNN1-208ENST00000588935 KIF27Q86VH2 1401 aa24.46■■□□□ 1.51
CNN1-208ENST00000588935 FBLN2P98095 1184 aa24.46■■□□□ 1.51
CNN1-208ENST00000588935 PBRM1Q86U86 1689 aa24.46■■□□□ 1.51
CNN1-208ENST00000588935 RUSC2Q8N2Y8 1516 aa24.45■■□□□ 1.5
CNN1-208ENST00000588935 SNAPC4Q5SXM2 1469 aa24.42■■□□□ 1.5
CNN1-208ENST00000588935 FAM9AQ8IZU1 332 aaPredicted RBP24.41■■□□□ 1.5
CNN1-208ENST00000588935 CHMP7Q8WUX9 453 aaPredicted RBP24.36■■□□□ 1.49
CNN1-208ENST00000588935 IGF1RP08069 1367 aa24.34■■□□□ 1.49
CNN1-208ENST00000588935 MAGI1Q96QZ7 1491 aaPredicted RBP24.32■■□□□ 1.48
CNN1-208ENST00000588935 ERICH3Q5RHP9 1530 aa24.31■■□□□ 1.48
CNN1-208ENST00000588935 CHD1O14646 1710 aa24.3■■□□□ 1.48
CNN1-208ENST00000588935 OSCARQ8IYS5 282 aa24.25■■□□□ 1.47
CNN1-208ENST00000588935 FHAD1B1AJZ9 1412 aa24.25■■□□□ 1.47
CNN1-208ENST00000588935 SYNJ2O15056 1496 aa24.25■■□□□ 1.47
CNN1-208ENST00000588935 ADAMTS12P58397 1594 aa24.24■■□□□ 1.47
CNN1-208ENST00000588935 CARMIL1Q5VZK9 1371 aa24.23■■□□□ 1.47
CNN1-208ENST00000588935 CSRNP3Q8WYN3 585 aa24.22■■□□□ 1.47
CNN1-208ENST00000588935 CUL7Q14999 1698 aa24.17■■□□□ 1.46
CNN1-208ENST00000588935 GRIN2AQ12879 1464 aa24.15■■□□□ 1.46
CNN1-208ENST00000588935 EHMT2Q96KQ7 1210 aa24.15■■□□□ 1.46
CNN1-208ENST00000588935 EEA1Q15075 1411 aa24.15■■□□□ 1.46
CNN1-208ENST00000588935 RAPGEF2Q9Y4G8 1499 aa24.07■■□□□ 1.44
CNN1-208ENST00000588935 DNAJC5Q9H3Z4 198 aa24.04■■□□□ 1.44
CNN1-208ENST00000588935 CEP170Q5SW79 1584 aa24.03■■□□□ 1.44
CNN1-208ENST00000588935 PRXQ9BXM0 1461 aa24.03■■□□□ 1.44
CNN1-208ENST00000588935 NUP160Q12769 1436 aa23.99■■□□□ 1.43
CNN1-208ENST00000588935 CLASP1Q7Z460 1538 aa23.94■■□□□ 1.42
CNN1-208ENST00000588935 UBTFP17480 764 aaKnown RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms