RNA–Protein interactions for RNA: ENST00000588438.1

LINC01841-202, Transcript of long intergenic non-protein coding RNA 1841, humanhuman

TSL 3 BASIC

Gene LINC01841, Length 523 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01841-202ENST00000588438 AEBP2Q6ZN18 517 aaPredicted RBP24.82■■□□□ 1.56
LINC01841-202ENST00000588438 NISCHQ9Y2I1 1504 aa24.05■■□□□ 1.44
LINC01841-202ENST00000588438 CHIC1Q5VXU3 224 aa23.31■■□□□ 1.32
LINC01841-202ENST00000588438 SENP3Q9H4L4 574 aaPredicted RBP21.39■■□□□ 1.01
LINC01841-202ENST00000588438 CCDC180Q9P1Z9 1646 aa21.29■■□□□ 1
LINC01841-202ENST00000588438 PHF23Q9BUL5 403 aaPredicted RBP20.97■□□□□ 0.95
LINC01841-202ENST00000588438 ABCC9O60706 1549 aa20.47■□□□□ 0.87
LINC01841-202ENST00000588438 ZCCHC6Q5VYS8 1495 aaKnown RBP20.11■□□□□ 0.81
LINC01841-202ENST00000588438 MYO15BQ96JP2 1530 aa20.01■□□□□ 0.79
LINC01841-202ENST00000588438 DCAF1Q9Y4B6 1507 aa20■□□□□ 0.79
LINC01841-202ENST00000588438 NACADO15069 1562 aa19.97■□□□□ 0.79
LINC01841-202ENST00000588438 FOXD1Q16676 465 aa19.93■□□□□ 0.78
LINC01841-202ENST00000588438 RB1CC1Q8TDY2 1594 aa19.9■□□□□ 0.78
LINC01841-202ENST00000588438 DCAF8L2P0C7V8 631 aa19.83■□□□□ 0.77
LINC01841-202ENST00000588438 POTEDQ86YR6 584 aa19.51■□□□□ 0.71
LINC01841-202ENST00000588438 UNC13AQ9UPW8 1703 aa19.34■□□□□ 0.69
LINC01841-202ENST00000588438 SCRIBQ14160 1630 aa19.34■□□□□ 0.69
LINC01841-202ENST00000588438 BICRAQ9NZM4 1560 aa19.25■□□□□ 0.67
LINC01841-202ENST00000588438 SHROOM4Q9ULL8 1493 aa19.22■□□□□ 0.67
LINC01841-202ENST00000588438 PABPN1Q86U42 306 aaKnown RBP eCLIP19.14■□□□□ 0.65
LINC01841-202ENST00000588438 MSH5O43196 834 aa18.99■□□□□ 0.63
LINC01841-202ENST00000588438 EIF4G1Q04637 1599 aaKnown RBP18.72■□□□□ 0.59
LINC01841-202ENST00000588438 CECR2Q9BXF3 1484 aa18.65■□□□□ 0.58
LINC01841-202ENST00000588438 BAZ1AQ9NRL2 1556 aaPredicted RBP18.64■□□□□ 0.58
LINC01841-202ENST00000588438 SMARCA4P51532 1647 aa18.59■□□□□ 0.57
LINC01841-202ENST00000588438 CC2D2AQ9P2K1 1620 aa18.56■□□□□ 0.56
LINC01841-202ENST00000588438 DNAJC5BQ9UF47 199 aa18.52■□□□□ 0.56
LINC01841-202ENST00000588438 PIAS4Q8N2W9 510 aaPredicted RBP18.51■□□□□ 0.55
LINC01841-202ENST00000588438 MROH2BQ7Z745 1585 aa18.49■□□□□ 0.55
LINC01841-202ENST00000588438 PEG3Q9GZU2 1588 aa18.47■□□□□ 0.55
LINC01841-202ENST00000588438 SMARCA2P51531 1590 aa18.46■□□□□ 0.55
LINC01841-202ENST00000588438 ATAD2BQ9ULI0 1458 aa18.43■□□□□ 0.54
LINC01841-202ENST00000588438 NCAPD3P42695 1498 aa18.42■□□□□ 0.54
LINC01841-202ENST00000588438 RSF1Q96T23 1441 aaPredicted RBP18.4■□□□□ 0.54
LINC01841-202ENST00000588438 HMGXB3Q12766 1538 aa18.36■□□□□ 0.53
LINC01841-202ENST00000588438 BAZ1BQ9UIG0 1483 aaKnown RBP18.28■□□□□ 0.52
LINC01841-202ENST00000588438 WIZO95785 1651 aa18.27■□□□□ 0.52
LINC01841-202ENST00000588438 TOP2AP11388 1531 aaKnown RBP18.18■□□□□ 0.5
LINC01841-202ENST00000588438 PLPPR3Q6T4P5 718 aa18.17■□□□□ 0.5
LINC01841-202ENST00000588438 PPP6R1Q9UPN7 881 aa18.12■□□□□ 0.49
LINC01841-202ENST00000588438 SUPT5HO00267 1087 aaKnown RBP18.03■□□□□ 0.48
LINC01841-202ENST00000588438 ADRA2BP18089 450 aa18.03■□□□□ 0.48
LINC01841-202ENST00000588438 CCDC88BA6NC98 1476 aa17.93■□□□□ 0.46
LINC01841-202ENST00000588438 LAMC3Q9Y6N6 1575 aa17.87■□□□□ 0.45
LINC01841-202ENST00000588438 CADPSQ9ULU8 1353 aa17.87■□□□□ 0.45
LINC01841-202ENST00000588438 CFTRP13569 1480 aa17.84■□□□□ 0.45
LINC01841-202ENST00000588438 NESP48681 1621 aa17.78■□□□□ 0.44
LINC01841-202ENST00000588438 PDS5BQ9NTI5 1447 aa17.75■□□□□ 0.43
LINC01841-202ENST00000588438 PRDM2Q13029 1718 aa17.68■□□□□ 0.42
LINC01841-202ENST00000588438 ERCC6Q03468 1493 aa17.66■□□□□ 0.42
LINC01841-202ENST00000588438 FANCD2Q9BXW9 1451 aa17.64■□□□□ 0.41
LINC01841-202ENST00000588438 CEP164Q9UPV0 1460 aa17.61■□□□□ 0.41
LINC01841-202ENST00000588438 KIF21AQ7Z4S6 1674 aa17.58■□□□□ 0.41
LINC01841-202ENST00000588438 MRC2Q9UBG0 1479 aa17.54■□□□□ 0.4
LINC01841-202ENST00000588438 THOC2Q8NI27 1593 aaKnown RBP17.51■□□□□ 0.39
LINC01841-202ENST00000588438 ABCC8Q09428 1581 aa17.48■□□□□ 0.39
LINC01841-202ENST00000588438 WDR62O43379 1518 aa17.47■□□□□ 0.39
LINC01841-202ENST00000588438 CUX2O14529 1486 aa17.44■□□□□ 0.38
LINC01841-202ENST00000588438 URB2Q14146 1524 aaKnown RBP17.43■□□□□ 0.38
LINC01841-202ENST00000588438 DNMBPQ6XZF7 1577 aa17.41■□□□□ 0.38
LINC01841-202ENST00000588438 TOPBP1Q92547 1522 aa17.39■□□□□ 0.37
LINC01841-202ENST00000588438 WRNQ14191 1432 aaPredicted RBP eCLIP17.35■□□□□ 0.37
LINC01841-202ENST00000588438 CUX1P39880 1505 aa17.34■□□□□ 0.37
LINC01841-202ENST00000588438 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
LINC01841-202ENST00000588438 BIVM-ERCC5R4GMW8 1640 aa17.29■□□□□ 0.36
LINC01841-202ENST00000588438 POLA1P09884 1462 aaPredicted RBP17.27■□□□□ 0.36
LINC01841-202ENST00000588438 SYNJ1O43426 1573 aa17.26■□□□□ 0.35
LINC01841-202ENST00000588438 FGD5Q6ZNL6 1462 aa17.24■□□□□ 0.35
LINC01841-202ENST00000588438 IFT140Q96RY7 1462 aa17.24■□□□□ 0.35
LINC01841-202ENST00000588438 SOGA1O94964 1423 aa17.19■□□□□ 0.34
LINC01841-202ENST00000588438 TARBP1Q13395 1621 aaKnown RBP17.18■□□□□ 0.34
LINC01841-202ENST00000588438 WDR97A6NE52 1622 aa17.15■□□□□ 0.34
LINC01841-202ENST00000588438 ABCA10Q8WWZ4 1543 aa17.14■□□□□ 0.33
LINC01841-202ENST00000588438 RAD54L2Q9Y4B4 1467 aa17.12■□□□□ 0.33
LINC01841-202ENST00000588438 TRIM41Q8WV44 630 aa17.08■□□□□ 0.32
LINC01841-202ENST00000588438 ZNF608Q9ULD9 1512 aaPredicted RBP17.07■□□□□ 0.32
LINC01841-202ENST00000588438 EIF4G3O43432 1585 aaKnown RBP17.04■□□□□ 0.32
LINC01841-202ENST00000588438 ABCA5Q8WWZ7 1642 aa17.03■□□□□ 0.32
LINC01841-202ENST00000588438 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.32
LINC01841-202ENST00000588438 AQRO60306 1485 aaKnown RBP eCLIP17.02■□□□□ 0.32
LINC01841-202ENST00000588438 GAPVD1Q14C86 1478 aa17■□□□□ 0.31
LINC01841-202ENST00000588438 GRIN2BQ13224 1484 aa16.99■□□□□ 0.31
LINC01841-202ENST00000588438 KIF27Q86VH2 1401 aa16.99■□□□□ 0.31
LINC01841-202ENST00000588438 ERICH3Q5RHP9 1530 aa16.95■□□□□ 0.3
LINC01841-202ENST00000588438 MAGI1Q96QZ7 1491 aaPredicted RBP16.94■□□□□ 0.3
LINC01841-202ENST00000588438 PBRM1Q86U86 1689 aa16.91■□□□□ 0.3
LINC01841-202ENST00000588438 EEA1Q15075 1411 aa16.89■□□□□ 0.29
LINC01841-202ENST00000588438 SNAPC4Q5SXM2 1469 aa16.88■□□□□ 0.29
LINC01841-202ENST00000588438 IGF1RP08069 1367 aa16.87■□□□□ 0.29
LINC01841-202ENST00000588438 SYNJ2O15056 1496 aa16.85■□□□□ 0.29
LINC01841-202ENST00000588438 DMRT2Q9Y5R5 561 aa16.84■□□□□ 0.29
LINC01841-202ENST00000588438 FHAD1B1AJZ9 1412 aa16.84■□□□□ 0.29
LINC01841-202ENST00000588438 ADAMTS12P58397 1594 aa16.83■□□□□ 0.28
LINC01841-202ENST00000588438 CUL7Q14999 1698 aa16.83■□□□□ 0.28
LINC01841-202ENST00000588438 RUSC2Q8N2Y8 1516 aa16.8■□□□□ 0.28
LINC01841-202ENST00000588438 CHMP7Q8WUX9 453 aaPredicted RBP16.77■□□□□ 0.28
LINC01841-202ENST00000588438 CARMIL1Q5VZK9 1371 aa16.77■□□□□ 0.27
LINC01841-202ENST00000588438 GRIN2AQ12879 1464 aa16.76■□□□□ 0.27
LINC01841-202ENST00000588438 CSRNP3Q8WYN3 585 aa16.74■□□□□ 0.27
LINC01841-202ENST00000588438 PRXQ9BXM0 1461 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms