RNA–Protein interactions for RNA: ENST00000588089.1

KDSR-207, Transcript of 3-ketodihydrosphingosine reductase, humanhuman

TSL 2

Gene KDSR, Length 1,265 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDSR-207ENST00000588089 NISCHQ9Y2I1 1504 aa34.34■■■■□ 3.09
KDSR-207ENST00000588089 CCDC180Q9P1Z9 1646 aa30.38■■■□□ 2.45
KDSR-207ENST00000588089 ABCC9O60706 1549 aa29.45■■■□□ 2.3
KDSR-207ENST00000588089 ZCCHC6Q5VYS8 1495 aaKnown RBP28.63■■■□□ 2.17
KDSR-207ENST00000588089 NACADO15069 1562 aa28.56■■■□□ 2.16
KDSR-207ENST00000588089 DCAF8L2P0C7V8 631 aa28.56■■■□□ 2.16
KDSR-207ENST00000588089 MYO15BQ96JP2 1530 aa28.53■■■□□ 2.16
KDSR-207ENST00000588089 RB1CC1Q8TDY2 1594 aa28.49■■■□□ 2.15
KDSR-207ENST00000588089 DCAF1Q9Y4B6 1507 aa28.48■■■□□ 2.15
KDSR-207ENST00000588089 UNC13AQ9UPW8 1703 aa27.75■■■□□ 2.03
KDSR-207ENST00000588089 SCRIBQ14160 1630 aa27.65■■■□□ 2.02
KDSR-207ENST00000588089 BICRAQ9NZM4 1560 aa27.6■■■□□ 2.01
KDSR-207ENST00000588089 PABPN1Q86U42 306 aaKnown RBP eCLIP27.59■■■□□ 2.01
KDSR-207ENST00000588089 SHROOM4Q9ULL8 1493 aa27.43■■□□□ 1.98
KDSR-207ENST00000588089 DNAJC5BQ9UF47 199 aa26.86■■□□□ 1.89
KDSR-207ENST00000588089 EIF4G1Q04637 1599 aaKnown RBP26.84■■□□□ 1.89
KDSR-207ENST00000588089 CECR2Q9BXF3 1484 aa26.68■■□□□ 1.86
KDSR-207ENST00000588089 CC2D2AQ9P2K1 1620 aa26.65■■□□□ 1.86
KDSR-207ENST00000588089 BAZ1AQ9NRL2 1556 aaPredicted RBP26.58■■□□□ 1.85
KDSR-207ENST00000588089 SMARCA4P51532 1647 aa26.54■■□□□ 1.84
KDSR-207ENST00000588089 MROH2BQ7Z745 1585 aa26.42■■□□□ 1.82
KDSR-207ENST00000588089 NCAPD3P42695 1498 aa26.38■■□□□ 1.81
KDSR-207ENST00000588089 ATAD2BQ9ULI0 1458 aa26.38■■□□□ 1.81
KDSR-207ENST00000588089 SMARCA2P51531 1590 aa26.37■■□□□ 1.81
KDSR-207ENST00000588089 PEG3Q9GZU2 1588 aa26.34■■□□□ 1.81
KDSR-207ENST00000588089 RSF1Q96T23 1441 aaPredicted RBP26.26■■□□□ 1.79
KDSR-207ENST00000588089 HMGXB3Q12766 1538 aa26.21■■□□□ 1.79
KDSR-207ENST00000588089 BAZ1BQ9UIG0 1483 aaKnown RBP26.15■■□□□ 1.78
KDSR-207ENST00000588089 WIZO95785 1651 aa26.11■■□□□ 1.77
KDSR-207ENST00000588089 TOP2AP11388 1531 aaKnown RBP25.89■■□□□ 1.74
KDSR-207ENST00000588089 SUPT5HO00267 1087 aaKnown RBP25.74■■□□□ 1.71
KDSR-207ENST00000588089 CCDC88BA6NC98 1476 aa25.62■■□□□ 1.69
KDSR-207ENST00000588089 CADPSQ9ULU8 1353 aa25.61■■□□□ 1.69
KDSR-207ENST00000588089 LAMC3Q9Y6N6 1575 aa25.59■■□□□ 1.69
KDSR-207ENST00000588089 NESP48681 1621 aa25.54■■□□□ 1.68
KDSR-207ENST00000588089 CFTRP13569 1480 aa25.5■■□□□ 1.67
KDSR-207ENST00000588089 PDS5BQ9NTI5 1447 aa25.46■■□□□ 1.67
KDSR-207ENST00000588089 ERCC6Q03468 1493 aa25.38■■□□□ 1.65
KDSR-207ENST00000588089 FANCD2Q9BXW9 1451 aa25.26■■□□□ 1.63
KDSR-207ENST00000588089 PRDM2Q13029 1718 aa25.22■■□□□ 1.63
KDSR-207ENST00000588089 KIF21AQ7Z4S6 1674 aa25.21■■□□□ 1.63
KDSR-207ENST00000588089 CEP164Q9UPV0 1460 aa25.2■■□□□ 1.62
KDSR-207ENST00000588089 AEBP2Q6ZN18 517 aaPredicted RBP25.19■■□□□ 1.62
KDSR-207ENST00000588089 MRC2Q9UBG0 1479 aa25.11■■□□□ 1.61
KDSR-207ENST00000588089 THOC2Q8NI27 1593 aaKnown RBP25.1■■□□□ 1.61
KDSR-207ENST00000588089 CUX2O14529 1486 aa25.08■■□□□ 1.6
KDSR-207ENST00000588089 WDR62O43379 1518 aa25.02■■□□□ 1.6
KDSR-207ENST00000588089 ABCC8Q09428 1581 aa24.98■■□□□ 1.59
KDSR-207ENST00000588089 URB2Q14146 1524 aaKnown RBP24.97■■□□□ 1.59
KDSR-207ENST00000588089 TOPBP1Q92547 1522 aa24.88■■□□□ 1.57
KDSR-207ENST00000588089 DNMBPQ6XZF7 1577 aa24.87■■□□□ 1.57
KDSR-207ENST00000588089 CUX1P39880 1505 aa24.76■■□□□ 1.55
KDSR-207ENST00000588089 WRNQ14191 1432 aaPredicted RBP eCLIP24.74■■□□□ 1.55
KDSR-207ENST00000588089 IFT140Q96RY7 1462 aa24.7■■□□□ 1.54
KDSR-207ENST00000588089 POLA1P09884 1462 aaPredicted RBP24.69■■□□□ 1.54
KDSR-207ENST00000588089 FGD5Q6ZNL6 1462 aa24.64■■□□□ 1.54
KDSR-207ENST00000588089 TOP2BQ02880 1626 aa24.64■■□□□ 1.53
KDSR-207ENST00000588089 SOGA1O94964 1423 aa24.63■■□□□ 1.53
KDSR-207ENST00000588089 BIVM-ERCC5R4GMW8 1640 aa24.61■■□□□ 1.53
KDSR-207ENST00000588089 SYNJ1O43426 1573 aa24.59■■□□□ 1.53
KDSR-207ENST00000588089 TARBP1Q13395 1621 aaKnown RBP24.58■■□□□ 1.53
KDSR-207ENST00000588089 RAD54L2Q9Y4B4 1467 aa24.55■■□□□ 1.52
KDSR-207ENST00000588089 ZNF608Q9ULD9 1512 aaPredicted RBP24.51■■□□□ 1.51
KDSR-207ENST00000588089 ABCA10Q8WWZ4 1543 aa24.47■■□□□ 1.51
KDSR-207ENST00000588089 WDR97A6NE52 1622 aa24.46■■□□□ 1.51
KDSR-207ENST00000588089 TDRD9Q8NDG6 1382 aaKnown RBP24.43■■□□□ 1.5
KDSR-207ENST00000588089 AQRO60306 1485 aaKnown RBP eCLIP24.43■■□□□ 1.5
KDSR-207ENST00000588089 EIF4G3O43432 1585 aaKnown RBP24.38■■□□□ 1.49
KDSR-207ENST00000588089 TRIM41Q8WV44 630 aa24.37■■□□□ 1.49
KDSR-207ENST00000588089 GAPVD1Q14C86 1478 aa24.33■■□□□ 1.49
KDSR-207ENST00000588089 GRIN2BQ13224 1484 aa24.31■■□□□ 1.48
KDSR-207ENST00000588089 ABCA5Q8WWZ7 1642 aa24.29■■□□□ 1.48
KDSR-207ENST00000588089 CHIC1Q5VXU3 224 aa24.23■■□□□ 1.47
KDSR-207ENST00000588089 KIF27Q86VH2 1401 aa24.23■■□□□ 1.47
KDSR-207ENST00000588089 MAGI1Q96QZ7 1491 aaPredicted RBP24.22■■□□□ 1.47
KDSR-207ENST00000588089 ERICH3Q5RHP9 1530 aa24.18■■□□□ 1.46
KDSR-207ENST00000588089 SNAPC4Q5SXM2 1469 aa24.17■■□□□ 1.46
KDSR-207ENST00000588089 PBRM1Q86U86 1689 aa24.16■■□□□ 1.46
KDSR-207ENST00000588089 OSCARQ8IYS5 282 aa24.13■■□□□ 1.45
KDSR-207ENST00000588089 IGF1RP08069 1367 aa24.13■■□□□ 1.45
KDSR-207ENST00000588089 CHMP7Q8WUX9 453 aaPredicted RBP24.11■■□□□ 1.45
KDSR-207ENST00000588089 SYNJ2O15056 1496 aa24.11■■□□□ 1.45
KDSR-207ENST00000588089 FBLN2P98095 1184 aa24.08■■□□□ 1.45
KDSR-207ENST00000588089 FHAD1B1AJZ9 1412 aa24.08■■□□□ 1.44
KDSR-207ENST00000588089 DNAJC5Q9H3Z4 198 aa24.07■■□□□ 1.44
KDSR-207ENST00000588089 ADAMTS12P58397 1594 aa24.02■■□□□ 1.44
KDSR-207ENST00000588089 RUSC2Q8N2Y8 1516 aa24.01■■□□□ 1.43
KDSR-207ENST00000588089 CHD1O14646 1710 aa24■■□□□ 1.43
KDSR-207ENST00000588089 GRIN2AQ12879 1464 aa23.97■■□□□ 1.43
KDSR-207ENST00000588089 CUL7Q14999 1698 aa23.97■■□□□ 1.43
KDSR-207ENST00000588089 EEA1Q15075 1411 aa23.97■■□□□ 1.43
KDSR-207ENST00000588089 CARMIL1Q5VZK9 1371 aa23.97■■□□□ 1.43
KDSR-207ENST00000588089 CSRNP3Q8WYN3 585 aa23.91■■□□□ 1.42
KDSR-207ENST00000588089 NUP160Q12769 1436 aa23.88■■□□□ 1.41
KDSR-207ENST00000588089 RAPGEF2Q9Y4G8 1499 aa23.84■■□□□ 1.41
KDSR-207ENST00000588089 PRXQ9BXM0 1461 aa23.83■■□□□ 1.41
KDSR-207ENST00000588089 CLASP1Q7Z460 1538 aa23.82■■□□□ 1.4
KDSR-207ENST00000588089 CEP170Q5SW79 1584 aa23.79■■□□□ 1.4
KDSR-207ENST00000588089 FAM9AQ8IZU1 332 aaPredicted RBP23.76■■□□□ 1.39
KDSR-207ENST00000588089 KIAA0586Q9BVV6 1533 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms