RNA–Protein interactions for RNA: ENST00000587609.1

C19orf66-206, Transcript of chromosome 19 open reading frame 66, humanhuman

TSL 3

Gene C19orf66, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf66-206ENST00000587609 NISCHQ9Y2I1 1504 aa34.36■■■■□ 3.09
C19orf66-206ENST00000587609 CCDC180Q9P1Z9 1646 aa30.45■■■□□ 2.47
C19orf66-206ENST00000587609 ABCC9O60706 1549 aa29.46■■■□□ 2.31
C19orf66-206ENST00000587609 ZCCHC6Q5VYS8 1495 aaKnown RBP28.7■■■□□ 2.18
C19orf66-206ENST00000587609 NACADO15069 1562 aa28.54■■■□□ 2.16
C19orf66-206ENST00000587609 DCAF8L2P0C7V8 631 aa28.5■■■□□ 2.15
C19orf66-206ENST00000587609 RB1CC1Q8TDY2 1594 aa28.5■■■□□ 2.15
C19orf66-206ENST00000587609 MYO15BQ96JP2 1530 aa28.49■■■□□ 2.15
C19orf66-206ENST00000587609 DCAF1Q9Y4B6 1507 aa28.48■■■□□ 2.15
C19orf66-206ENST00000587609 UNC13AQ9UPW8 1703 aa27.89■■■□□ 2.06
C19orf66-206ENST00000587609 SCRIBQ14160 1630 aa27.77■■■□□ 2.04
C19orf66-206ENST00000587609 BICRAQ9NZM4 1560 aa27.65■■■□□ 2.02
C19orf66-206ENST00000587609 PABPN1Q86U42 306 aaKnown RBP eCLIP27.55■■■□□ 2
C19orf66-206ENST00000587609 SHROOM4Q9ULL8 1493 aa27.38■■□□□ 1.97
C19orf66-206ENST00000587609 EIF4G1Q04637 1599 aaKnown RBP26.88■■□□□ 1.89
C19orf66-206ENST00000587609 DNAJC5BQ9UF47 199 aa26.78■■□□□ 1.88
C19orf66-206ENST00000587609 CECR2Q9BXF3 1484 aa26.73■■□□□ 1.87
C19orf66-206ENST00000587609 CC2D2AQ9P2K1 1620 aa26.68■■□□□ 1.86
C19orf66-206ENST00000587609 BAZ1AQ9NRL2 1556 aaPredicted RBP26.62■■□□□ 1.85
C19orf66-206ENST00000587609 SMARCA4P51532 1647 aa26.61■■□□□ 1.85
C19orf66-206ENST00000587609 MROH2BQ7Z745 1585 aa26.49■■□□□ 1.83
C19orf66-206ENST00000587609 ATAD2BQ9ULI0 1458 aa26.38■■□□□ 1.81
C19orf66-206ENST00000587609 SMARCA2P51531 1590 aa26.37■■□□□ 1.81
C19orf66-206ENST00000587609 PEG3Q9GZU2 1588 aa26.37■■□□□ 1.81
C19orf66-206ENST00000587609 NCAPD3P42695 1498 aa26.33■■□□□ 1.81
C19orf66-206ENST00000587609 RSF1Q96T23 1441 aaPredicted RBP26.29■■□□□ 1.8
C19orf66-206ENST00000587609 HMGXB3Q12766 1538 aa26.24■■□□□ 1.79
C19orf66-206ENST00000587609 WIZO95785 1651 aa26.22■■□□□ 1.79
C19orf66-206ENST00000587609 BAZ1BQ9UIG0 1483 aaKnown RBP26.17■■□□□ 1.78
C19orf66-206ENST00000587609 TOP2AP11388 1531 aaKnown RBP25.96■■□□□ 1.75
C19orf66-206ENST00000587609 SUPT5HO00267 1087 aaKnown RBP25.77■■□□□ 1.72
C19orf66-206ENST00000587609 CCDC88BA6NC98 1476 aa25.64■■□□□ 1.69
C19orf66-206ENST00000587609 LAMC3Q9Y6N6 1575 aa25.6■■□□□ 1.69
C19orf66-206ENST00000587609 NESP48681 1621 aa25.59■■□□□ 1.69
C19orf66-206ENST00000587609 CADPSQ9ULU8 1353 aa25.56■■□□□ 1.68
C19orf66-206ENST00000587609 CFTRP13569 1480 aa25.48■■□□□ 1.67
C19orf66-206ENST00000587609 PDS5BQ9NTI5 1447 aa25.38■■□□□ 1.65
C19orf66-206ENST00000587609 ERCC6Q03468 1493 aa25.35■■□□□ 1.65
C19orf66-206ENST00000587609 PRDM2Q13029 1718 aa25.35■■□□□ 1.65
C19orf66-206ENST00000587609 KIF21AQ7Z4S6 1674 aa25.32■■□□□ 1.64
C19orf66-206ENST00000587609 FANCD2Q9BXW9 1451 aa25.27■■□□□ 1.64
C19orf66-206ENST00000587609 CEP164Q9UPV0 1460 aa25.21■■□□□ 1.63
C19orf66-206ENST00000587609 THOC2Q8NI27 1593 aaKnown RBP25.18■■□□□ 1.62
C19orf66-206ENST00000587609 MRC2Q9UBG0 1479 aa25.11■■□□□ 1.61
C19orf66-206ENST00000587609 WDR62O43379 1518 aa25.04■■□□□ 1.6
C19orf66-206ENST00000587609 CUX2O14529 1486 aa25.02■■□□□ 1.6
C19orf66-206ENST00000587609 URB2Q14146 1524 aaKnown RBP25.02■■□□□ 1.6
C19orf66-206ENST00000587609 ABCC8Q09428 1581 aa24.93■■□□□ 1.58
C19orf66-206ENST00000587609 DNMBPQ6XZF7 1577 aa24.91■■□□□ 1.58
C19orf66-206ENST00000587609 TOPBP1Q92547 1522 aa24.91■■□□□ 1.58
C19orf66-206ENST00000587609 CUX1P39880 1505 aa24.83■■□□□ 1.57
C19orf66-206ENST00000587609 WRNQ14191 1432 aaPredicted RBP eCLIP24.77■■□□□ 1.56
C19orf66-206ENST00000587609 BIVM-ERCC5R4GMW8 1640 aa24.72■■□□□ 1.55
C19orf66-206ENST00000587609 POLA1P09884 1462 aaPredicted RBP24.71■■□□□ 1.55
C19orf66-206ENST00000587609 TOP2BQ02880 1626 aa24.71■■□□□ 1.55
C19orf66-206ENST00000587609 SYNJ1O43426 1573 aa24.71■■□□□ 1.55
C19orf66-206ENST00000587609 FGD5Q6ZNL6 1462 aa24.7■■□□□ 1.54
C19orf66-206ENST00000587609 IFT140Q96RY7 1462 aa24.67■■□□□ 1.54
C19orf66-206ENST00000587609 TARBP1Q13395 1621 aaKnown RBP24.64■■□□□ 1.53
C19orf66-206ENST00000587609 SOGA1O94964 1423 aa24.6■■□□□ 1.53
C19orf66-206ENST00000587609 RAD54L2Q9Y4B4 1467 aa24.59■■□□□ 1.53
C19orf66-206ENST00000587609 ZNF608Q9ULD9 1512 aaPredicted RBP24.53■■□□□ 1.52
C19orf66-206ENST00000587609 WDR97A6NE52 1622 aa24.52■■□□□ 1.52
C19orf66-206ENST00000587609 ABCA10Q8WWZ4 1543 aa24.48■■□□□ 1.51
C19orf66-206ENST00000587609 EIF4G3O43432 1585 aaKnown RBP24.47■■□□□ 1.51
C19orf66-206ENST00000587609 AQRO60306 1485 aaKnown RBP eCLIP24.42■■□□□ 1.5
C19orf66-206ENST00000587609 TDRD9Q8NDG6 1382 aaKnown RBP24.42■■□□□ 1.5
C19orf66-206ENST00000587609 ABCA5Q8WWZ7 1642 aa24.37■■□□□ 1.49
C19orf66-206ENST00000587609 GAPVD1Q14C86 1478 aa24.33■■□□□ 1.49
C19orf66-206ENST00000587609 TRIM41Q8WV44 630 aa24.33■■□□□ 1.49
C19orf66-206ENST00000587609 GRIN2BQ13224 1484 aa24.29■■□□□ 1.48
C19orf66-206ENST00000587609 PBRM1Q86U86 1689 aa24.29■■□□□ 1.48
C19orf66-206ENST00000587609 CHIC1Q5VXU3 224 aa24.25■■□□□ 1.47
C19orf66-206ENST00000587609 SNAPC4Q5SXM2 1469 aa24.22■■□□□ 1.47
C19orf66-206ENST00000587609 KIF27Q86VH2 1401 aa24.21■■□□□ 1.47
C19orf66-206ENST00000587609 MAGI1Q96QZ7 1491 aaPredicted RBP24.2■■□□□ 1.47
C19orf66-206ENST00000587609 ERICH3Q5RHP9 1530 aa24.2■■□□□ 1.46
C19orf66-206ENST00000587609 CHD1O14646 1710 aa24.11■■□□□ 1.45
C19orf66-206ENST00000587609 ADAMTS12P58397 1594 aa24.11■■□□□ 1.45
C19orf66-206ENST00000587609 SYNJ2O15056 1496 aa24.1■■□□□ 1.45
C19orf66-206ENST00000587609 RUSC2Q8N2Y8 1516 aa24.1■■□□□ 1.45
C19orf66-206ENST00000587609 IGF1RP08069 1367 aa24.09■■□□□ 1.45
C19orf66-206ENST00000587609 FHAD1B1AJZ9 1412 aa24.07■■□□□ 1.44
C19orf66-206ENST00000587609 CUL7Q14999 1698 aa24.04■■□□□ 1.44
C19orf66-206ENST00000587609 CHMP7Q8WUX9 453 aaPredicted RBP24.03■■□□□ 1.44
C19orf66-206ENST00000587609 FBLN2P98095 1184 aa24.02■■□□□ 1.44
C19orf66-206ENST00000587609 OSCARQ8IYS5 282 aa24■■□□□ 1.43
C19orf66-206ENST00000587609 GRIN2AQ12879 1464 aa23.98■■□□□ 1.43
C19orf66-206ENST00000587609 EEA1Q15075 1411 aa23.96■■□□□ 1.43
C19orf66-206ENST00000587609 CARMIL1Q5VZK9 1371 aa23.95■■□□□ 1.42
C19orf66-206ENST00000587609 DNAJC5Q9H3Z4 198 aa23.89■■□□□ 1.41
C19orf66-206ENST00000587609 NUP160Q12769 1436 aa23.88■■□□□ 1.41
C19orf66-206ENST00000587609 CEP170Q5SW79 1584 aa23.86■■□□□ 1.41
C19orf66-206ENST00000587609 CLASP1Q7Z460 1538 aa23.86■■□□□ 1.41
C19orf66-206ENST00000587609 CSRNP3Q8WYN3 585 aa23.86■■□□□ 1.41
C19orf66-206ENST00000587609 PRXQ9BXM0 1461 aa23.85■■□□□ 1.41
C19orf66-206ENST00000587609 RAPGEF2Q9Y4G8 1499 aa23.85■■□□□ 1.41
C19orf66-206ENST00000587609 FAM9AQ8IZU1 332 aaPredicted RBP23.8■■□□□ 1.4
C19orf66-206ENST00000587609 KIF21BO75037 1637 aa23.71■■□□□ 1.39
C19orf66-206ENST00000587609 KIAA0586Q9BVV6 1533 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms