RNA–Protein interactions for RNA: ENST00000587487.5

TRMT1-208, Transcript of tRNA methyltransferase 1, humanhuman

TSL 3

Gene TRMT1, Length 813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-208ENST00000587487 NISCHQ9Y2I1 1504 aa32.05■■■□□ 2.72
TRMT1-208ENST00000587487 CCDC180Q9P1Z9 1646 aa28.43■■■□□ 2.14
TRMT1-208ENST00000587487 ABCC9O60706 1549 aa27.51■■■□□ 2
TRMT1-208ENST00000587487 ZCCHC6Q5VYS8 1495 aaKnown RBP26.76■■□□□ 1.87
TRMT1-208ENST00000587487 MYO15BQ96JP2 1530 aa26.7■■□□□ 1.86
TRMT1-208ENST00000587487 NACADO15069 1562 aa26.68■■□□□ 1.86
TRMT1-208ENST00000587487 DCAF1Q9Y4B6 1507 aa26.62■■□□□ 1.85
TRMT1-208ENST00000587487 RB1CC1Q8TDY2 1594 aa26.62■■□□□ 1.85
TRMT1-208ENST00000587487 DCAF8L2P0C7V8 631 aa26.57■■□□□ 1.84
TRMT1-208ENST00000587487 UNC13AQ9UPW8 1703 aa25.97■■□□□ 1.75
TRMT1-208ENST00000587487 SCRIBQ14160 1630 aa25.83■■□□□ 1.73
TRMT1-208ENST00000587487 BICRAQ9NZM4 1560 aa25.82■■□□□ 1.72
TRMT1-208ENST00000587487 PABPN1Q86U42 306 aaKnown RBP eCLIP25.79■■□□□ 1.721e-7■□□□□ 9.9
TRMT1-208ENST00000587487 DNAJC5BQ9UF47 199 aa25.72■■□□□ 1.71
TRMT1-208ENST00000587487 SHROOM4Q9ULL8 1493 aa25.7■■□□□ 1.7
TRMT1-208ENST00000587487 EIF4G1Q04637 1599 aaKnown RBP25.1■■□□□ 1.61
TRMT1-208ENST00000587487 CC2D2AQ9P2K1 1620 aa24.92■■□□□ 1.58
TRMT1-208ENST00000587487 CECR2Q9BXF3 1484 aa24.89■■□□□ 1.57
TRMT1-208ENST00000587487 BAZ1AQ9NRL2 1556 aaPredicted RBP24.82■■□□□ 1.56
TRMT1-208ENST00000587487 SMARCA4P51532 1647 aa24.8■■□□□ 1.56
TRMT1-208ENST00000587487 MROH2BQ7Z745 1585 aa24.66■■□□□ 1.54
TRMT1-208ENST00000587487 PEG3Q9GZU2 1588 aa24.65■■□□□ 1.54
TRMT1-208ENST00000587487 NCAPD3P42695 1498 aa24.64■■□□□ 1.53
TRMT1-208ENST00000587487 ATAD2BQ9ULI0 1458 aa24.64■■□□□ 1.53
TRMT1-208ENST00000587487 SMARCA2P51531 1590 aa24.62■■□□□ 1.53
TRMT1-208ENST00000587487 HMGXB3Q12766 1538 aa24.53■■□□□ 1.52
TRMT1-208ENST00000587487 RSF1Q96T23 1441 aaPredicted RBP24.48■■□□□ 1.51
TRMT1-208ENST00000587487 BAZ1BQ9UIG0 1483 aaKnown RBP24.4■■□□□ 1.5
TRMT1-208ENST00000587487 WIZO95785 1651 aa24.36■■□□□ 1.49
TRMT1-208ENST00000587487 TOP2AP11388 1531 aaKnown RBP24.19■■□□□ 1.46
TRMT1-208ENST00000587487 DNAJC5Q9H3Z4 198 aa24.05■■□□□ 1.44
TRMT1-208ENST00000587487 LAMC3Q9Y6N6 1575 aa23.91■■□□□ 1.42
TRMT1-208ENST00000587487 CADPSQ9ULU8 1353 aa23.89■■□□□ 1.41
TRMT1-208ENST00000587487 CCDC88BA6NC98 1476 aa23.87■■□□□ 1.41
TRMT1-208ENST00000587487 ERCC6Q03468 1493 aa23.87■■□□□ 1.41
TRMT1-208ENST00000587487 NESP48681 1621 aa23.86■■□□□ 1.41
TRMT1-208ENST00000587487 SUPT5HO00267 1087 aaKnown RBP23.82■■□□□ 1.4
TRMT1-208ENST00000587487 CFTRP13569 1480 aa23.81■■□□□ 1.4
TRMT1-208ENST00000587487 PDS5BQ9NTI5 1447 aa23.73■■□□□ 1.39
TRMT1-208ENST00000587487 CUX2O14529 1486 aa23.62■■□□□ 1.37
TRMT1-208ENST00000587487 PRDM2Q13029 1718 aa23.59■■□□□ 1.37
TRMT1-208ENST00000587487 KIF21AQ7Z4S6 1674 aa23.58■■□□□ 1.37
TRMT1-208ENST00000587487 FANCD2Q9BXW9 1451 aa23.58■■□□□ 1.37
TRMT1-208ENST00000587487 THOC2Q8NI27 1593 aaKnown RBP23.53■■□□□ 1.36
TRMT1-208ENST00000587487 CEP164Q9UPV0 1460 aa23.53■■□□□ 1.36
TRMT1-208ENST00000587487 MRC2Q9UBG0 1479 aa23.47■■□□□ 1.35
TRMT1-208ENST00000587487 WDR62O43379 1518 aa23.42■■□□□ 1.34
TRMT1-208ENST00000587487 URB2Q14146 1524 aaKnown RBP23.34■■□□□ 1.33
TRMT1-208ENST00000587487 ABCC8Q09428 1581 aa23.29■■□□□ 1.32
TRMT1-208ENST00000587487 TOPBP1Q92547 1522 aa23.23■■□□□ 1.31
TRMT1-208ENST00000587487 DNMBPQ6XZF7 1577 aa23.23■■□□□ 1.31
TRMT1-208ENST00000587487 CUX1P39880 1505 aa23.13■■□□□ 1.29
TRMT1-208ENST00000587487 IFT140Q96RY7 1462 aa23.06■■□□□ 1.28
TRMT1-208ENST00000587487 POLA1P09884 1462 aaPredicted RBP23.05■■□□□ 1.28
TRMT1-208ENST00000587487 WRNQ14191 1432 aaPredicted RBP eCLIP23.05■■□□□ 1.28
TRMT1-208ENST00000587487 TOP2BQ02880 1626 aa23■■□□□ 1.27
TRMT1-208ENST00000587487 BIVM-ERCC5R4GMW8 1640 aa23■■□□□ 1.27
TRMT1-208ENST00000587487 FGD5Q6ZNL6 1462 aa23■■□□□ 1.27
TRMT1-208ENST00000587487 TARBP1Q13395 1621 aaKnown RBP22.98■■□□□ 1.27
TRMT1-208ENST00000587487 SYNJ1O43426 1573 aa22.97■■□□□ 1.27
TRMT1-208ENST00000587487 SOGA1O94964 1423 aa22.93■■□□□ 1.26
TRMT1-208ENST00000587487 RAD54L2Q9Y4B4 1467 aa22.9■■□□□ 1.26
TRMT1-208ENST00000587487 WDR97A6NE52 1622 aa22.89■■□□□ 1.25
TRMT1-208ENST00000587487 ZNF608Q9ULD9 1512 aaPredicted RBP22.88■■□□□ 1.25
TRMT1-208ENST00000587487 ABCA10Q8WWZ4 1543 aa22.85■■□□□ 1.25
TRMT1-208ENST00000587487 EIF4G3O43432 1585 aaKnown RBP22.82■■□□□ 1.24
TRMT1-208ENST00000587487 OSCARQ8IYS5 282 aa22.8■■□□□ 1.24
TRMT1-208ENST00000587487 AQRO60306 1485 aaKnown RBP eCLIP22.76■■□□□ 1.232e-6■■■■□ 20.5
TRMT1-208ENST00000587487 TDRD9Q8NDG6 1382 aaKnown RBP22.75■■□□□ 1.23
TRMT1-208ENST00000587487 ABCA5Q8WWZ7 1642 aa22.73■■□□□ 1.23
TRMT1-208ENST00000587487 TRIM41Q8WV44 630 aa22.7■■□□□ 1.22
TRMT1-208ENST00000587487 GAPVD1Q14C86 1478 aa22.68■■□□□ 1.22
TRMT1-208ENST00000587487 GRIN2BQ13224 1484 aa22.67■■□□□ 1.22
TRMT1-208ENST00000587487 MAGI1Q96QZ7 1491 aaPredicted RBP22.62■■□□□ 1.21
TRMT1-208ENST00000587487 FBLN2P98095 1184 aa22.6■■□□□ 1.21
TRMT1-208ENST00000587487 PBRM1Q86U86 1689 aa22.59■■□□□ 1.21
TRMT1-208ENST00000587487 ERICH3Q5RHP9 1530 aa22.58■■□□□ 1.21
TRMT1-208ENST00000587487 SNAPC4Q5SXM2 1469 aa22.58■■□□□ 1.2
TRMT1-208ENST00000587487 KIF27Q86VH2 1401 aa22.56■■□□□ 1.2
TRMT1-208ENST00000587487 CHMP7Q8WUX9 453 aaPredicted RBP22.51■■□□□ 1.19
TRMT1-208ENST00000587487 SYNJ2O15056 1496 aa22.51■■□□□ 1.19
TRMT1-208ENST00000587487 ADAMTS12P58397 1594 aa22.48■■□□□ 1.19
TRMT1-208ENST00000587487 IGF1RP08069 1367 aa22.46■■□□□ 1.19
TRMT1-208ENST00000587487 FHAD1B1AJZ9 1412 aa22.46■■□□□ 1.19
TRMT1-208ENST00000587487 CHIC1Q5VXU3 224 aa22.45■■□□□ 1.18
TRMT1-208ENST00000587487 CHD1O14646 1710 aa22.45■■□□□ 1.18
TRMT1-208ENST00000587487 CUL7Q14999 1698 aa22.39■■□□□ 1.17
TRMT1-208ENST00000587487 GRIN2AQ12879 1464 aa22.38■■□□□ 1.17
TRMT1-208ENST00000587487 RUSC2Q8N2Y8 1516 aa22.36■■□□□ 1.17
TRMT1-208ENST00000587487 NUP160Q12769 1436 aa22.32■■□□□ 1.16
TRMT1-208ENST00000587487 EEA1Q15075 1411 aa22.31■■□□□ 1.16
TRMT1-208ENST00000587487 CLASP1Q7Z460 1538 aa22.31■■□□□ 1.16
TRMT1-208ENST00000587487 CARMIL1Q5VZK9 1371 aa22.3■■□□□ 1.16
TRMT1-208ENST00000587487 CEP170Q5SW79 1584 aa22.25■■□□□ 1.15
TRMT1-208ENST00000587487 PRXQ9BXM0 1461 aa22.22■■□□□ 1.15
TRMT1-208ENST00000587487 RAPGEF2Q9Y4G8 1499 aa22.21■■□□□ 1.15
TRMT1-208ENST00000587487 CYB5RLQ6IPT4 315 aa22.2■■□□□ 1.14
TRMT1-208ENST00000587487 CSRNP3Q8WYN3 585 aa22.16■■□□□ 1.14
TRMT1-208ENST00000587487 ARHGEF11O15085 1522 aa22.16■■□□□ 1.14
TRMT1-208ENST00000587487 RIMBP3CA6NJZ7 1639 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms