RNA–Protein interactions for RNA: ENST00000587299.1

ATP6V0A1-211, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 3

Gene ATP6V0A1, Length 1,000 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-211ENST00000587299 AEBP2Q6ZN18 517 aaPredicted RBP17.46■□□□□ 0.39
ATP6V0A1-211ENST00000587299 CHIC1Q5VXU3 224 aa16.25■□□□□ 0.19
ATP6V0A1-211ENST00000587299 NISCHQ9Y2I1 1504 aa16.13■□□□□ 0.17
ATP6V0A1-211ENST00000587299 SENP3Q9H4L4 574 aaPredicted RBP14.94□□□□□ -0.02
ATP6V0A1-211ENST00000587299 PHF23Q9BUL5 403 aaPredicted RBP14.65□□□□□ -0.06
ATP6V0A1-211ENST00000587299 CCDC180Q9P1Z9 1646 aa14.18□□□□□ -0.14
ATP6V0A1-211ENST00000587299 FOXD1Q16676 465 aa14.01□□□□□ -0.17
ATP6V0A1-211ENST00000587299 POTEDQ86YR6 584 aa13.91□□□□□ -0.18
ATP6V0A1-211ENST00000587299 ZCCHC6Q5VYS8 1495 aaKnown RBP13.61□□□□□ -0.23
ATP6V0A1-211ENST00000587299 DCAF1Q9Y4B6 1507 aa13.42□□□□□ -0.26
ATP6V0A1-211ENST00000587299 MSH5O43196 834 aa13.29□□□□□ -0.28
ATP6V0A1-211ENST00000587299 MYO15BQ96JP2 1530 aa13.27□□□□□ -0.29
ATP6V0A1-211ENST00000587299 ABCC9O60706 1549 aa13.2□□□□□ -0.3
ATP6V0A1-211ENST00000587299 NACADO15069 1562 aa13.12□□□□□ -0.31
ATP6V0A1-211ENST00000587299 RB1CC1Q8TDY2 1594 aa12.99□□□□□ -0.33
ATP6V0A1-211ENST00000587299 DCAF8L2P0C7V8 631 aa12.97□□□□□ -0.33
ATP6V0A1-211ENST00000587299 SHROOM4Q9ULL8 1493 aa12.95□□□□□ -0.34
ATP6V0A1-211ENST00000587299 PIAS4Q8N2W9 510 aaPredicted RBP12.94□□□□□ -0.34
ATP6V0A1-211ENST00000587299 SCRIBQ14160 1630 aa12.91□□□□□ -0.34
ATP6V0A1-211ENST00000587299 UNC13AQ9UPW8 1703 aa12.82□□□□□ -0.36
ATP6V0A1-211ENST00000587299 PPP6R1Q9UPN7 881 aa12.69□□□□□ -0.38
ATP6V0A1-211ENST00000587299 BICRAQ9NZM4 1560 aa12.65□□□□□ -0.38
ATP6V0A1-211ENST00000587299 PLPPR3Q6T4P5 718 aa12.62□□□□□ -0.39
ATP6V0A1-211ENST00000587299 ADRA2BP18089 450 aa12.6□□□□□ -0.39
ATP6V0A1-211ENST00000587299 CECR2Q9BXF3 1484 aa12.48□□□□□ -0.41
ATP6V0A1-211ENST00000587299 RSF1Q96T23 1441 aaPredicted RBP12.46□□□□□ -0.41
ATP6V0A1-211ENST00000587299 BAZ1AQ9NRL2 1556 aaPredicted RBP12.46□□□□□ -0.42
ATP6V0A1-211ENST00000587299 MROH2BQ7Z745 1585 aa12.44□□□□□ -0.42
ATP6V0A1-211ENST00000587299 SMARCA4P51532 1647 aa12.44□□□□□ -0.42
ATP6V0A1-211ENST00000587299 SUPT5HO00267 1087 aaKnown RBP12.39□□□□□ -0.43
ATP6V0A1-211ENST00000587299 WIZO95785 1651 aa12.35□□□□□ -0.43
ATP6V0A1-211ENST00000587299 PABPN1Q86U42 306 aaKnown RBP eCLIP12.34□□□□□ -0.43
ATP6V0A1-211ENST00000587299 PEG3Q9GZU2 1588 aa12.34□□□□□ -0.43
ATP6V0A1-211ENST00000587299 TOP2AP11388 1531 aaKnown RBP12.26□□□□□ -0.45
ATP6V0A1-211ENST00000587299 EIF4G1Q04637 1599 aaKnown RBP12.23□□□□□ -0.45
ATP6V0A1-211ENST00000587299 SMARCA2P51531 1590 aa12.2□□□□□ -0.46
ATP6V0A1-211ENST00000587299 ATAD2BQ9ULI0 1458 aa12.18□□□□□ -0.46
ATP6V0A1-211ENST00000587299 HMGXB3Q12766 1538 aa12.14□□□□□ -0.47
ATP6V0A1-211ENST00000587299 BAZ1BQ9UIG0 1483 aaKnown RBP12.08□□□□□ -0.47
ATP6V0A1-211ENST00000587299 NCAPD3P42695 1498 aa12.08□□□□□ -0.48
ATP6V0A1-211ENST00000587299 CCDC88BA6NC98 1476 aa12.05□□□□□ -0.48
ATP6V0A1-211ENST00000587299 CC2D2AQ9P2K1 1620 aa12.04□□□□□ -0.48
ATP6V0A1-211ENST00000587299 PRDM2Q13029 1718 aa11.89□□□□□ -0.51
ATP6V0A1-211ENST00000587299 CFTRP13569 1480 aa11.82□□□□□ -0.52
ATP6V0A1-211ENST00000587299 ABCC8Q09428 1581 aa11.8□□□□□ -0.52
ATP6V0A1-211ENST00000587299 DMRT2Q9Y5R5 561 aa11.78□□□□□ -0.52
ATP6V0A1-211ENST00000587299 SYNJ1O43426 1573 aa11.75□□□□□ -0.53
ATP6V0A1-211ENST00000587299 MAPK8IP2Q13387 824 aaPredicted RBP11.74□□□□□ -0.53
ATP6V0A1-211ENST00000587299 BIVM-ERCC5R4GMW8 1640 aa11.74□□□□□ -0.53
ATP6V0A1-211ENST00000587299 WRNQ14191 1432 aaPredicted RBP eCLIP11.71□□□□□ -0.53
ATP6V0A1-211ENST00000587299 CADPSQ9ULU8 1353 aa11.71□□□□□ -0.53
ATP6V0A1-211ENST00000587299 CACNB1Q02641 598 aaPredicted RBP11.71□□□□□ -0.53
ATP6V0A1-211ENST00000587299 TOP2BQ02880 1626 aa11.71□□□□□ -0.54
ATP6V0A1-211ENST00000587299 LAMC3Q9Y6N6 1575 aa11.7□□□□□ -0.54
ATP6V0A1-211ENST00000587299 TRIM41Q8WV44 630 aa11.68□□□□□ -0.54
ATP6V0A1-211ENST00000587299 CUX1P39880 1505 aa11.65□□□□□ -0.54
ATP6V0A1-211ENST00000587299 NESP48681 1621 aa11.62□□□□□ -0.55
ATP6V0A1-211ENST00000587299 DNAJC5BQ9UF47 199 aa11.61□□□□□ -0.55
ATP6V0A1-211ENST00000587299 FANCD2Q9BXW9 1451 aa11.61□□□□□ -0.55
ATP6V0A1-211ENST00000587299 EEA1Q15075 1411 aa11.58□□□□□ -0.56
ATP6V0A1-211ENST00000587299 KIF21AQ7Z4S6 1674 aa11.58□□□□□ -0.56
ATP6V0A1-211ENST00000587299 DNMBPQ6XZF7 1577 aa11.57□□□□□ -0.56
ATP6V0A1-211ENST00000587299 CEP164Q9UPV0 1460 aa11.55□□□□□ -0.56
ATP6V0A1-211ENST00000587299 SOGA1O94964 1423 aa11.53□□□□□ -0.56
ATP6V0A1-211ENST00000587299 PDS5BQ9NTI5 1447 aa11.52□□□□□ -0.57
ATP6V0A1-211ENST00000587299 TOPBP1Q92547 1522 aa11.51□□□□□ -0.57
ATP6V0A1-211ENST00000587299 URB2Q14146 1524 aaKnown RBP11.5□□□□□ -0.57
ATP6V0A1-211ENST00000587299 RUSC2Q8N2Y8 1516 aa11.5□□□□□ -0.57
ATP6V0A1-211ENST00000587299 FGD5Q6ZNL6 1462 aa11.5□□□□□ -0.57
ATP6V0A1-211ENST00000587299 WDR97A6NE52 1622 aa11.49□□□□□ -0.57
ATP6V0A1-211ENST00000587299 KIF21BO75037 1637 aa11.49□□□□□ -0.57
ATP6V0A1-211ENST00000587299 SCAF1Q9H7N4 1312 aaKnown RBP11.47□□□□□ -0.57
ATP6V0A1-211ENST00000587299 POLA1P09884 1462 aaPredicted RBP11.45□□□□□ -0.58
ATP6V0A1-211ENST00000587299 THOC2Q8NI27 1593 aaKnown RBP11.43□□□□□ -0.58
ATP6V0A1-211ENST00000587299 WDR62O43379 1518 aa11.43□□□□□ -0.58
ATP6V0A1-211ENST00000587299 ABCA10Q8WWZ4 1543 aa11.43□□□□□ -0.58
ATP6V0A1-211ENST00000587299 MRC2Q9UBG0 1479 aa11.43□□□□□ -0.58
ATP6V0A1-211ENST00000587299 ERICH3Q5RHP9 1530 aa11.41□□□□□ -0.58
ATP6V0A1-211ENST00000587299 GOLGA3Q08378 1498 aa11.4□□□□□ -0.58
ATP6V0A1-211ENST00000587299 TARBP1Q13395 1621 aaKnown RBP11.4□□□□□ -0.58
ATP6V0A1-211ENST00000587299 ABCA5Q8WWZ7 1642 aa11.4□□□□□ -0.58
ATP6V0A1-211ENST00000587299 LOC105371045A0A1W2PR82 267 aa11.4□□□□□ -0.58
ATP6V0A1-211ENST00000587299 FAM9AQ8IZU1 332 aaPredicted RBP11.4□□□□□ -0.58
ATP6V0A1-211ENST00000587299 KIF27Q86VH2 1401 aa11.4□□□□□ -0.58
ATP6V0A1-211ENST00000587299 PRXQ9BXM0 1461 aa11.39□□□□□ -0.59
ATP6V0A1-211ENST00000587299 CUX2O14529 1486 aa11.38□□□□□ -0.59
ATP6V0A1-211ENST00000587299 CSRNP3Q8WYN3 585 aa11.37□□□□□ -0.59
ATP6V0A1-211ENST00000587299 RAD54L2Q9Y4B4 1467 aa11.36□□□□□ -0.59
ATP6V0A1-211ENST00000587299 RAPGEF2Q9Y4G8 1499 aa11.34□□□□□ -0.59
ATP6V0A1-211ENST00000587299 CUL7Q14999 1698 aa11.33□□□□□ -0.6
ATP6V0A1-211ENST00000587299 TNIKQ9UKE5 1360 aa11.33□□□□□ -0.6
ATP6V0A1-211ENST00000587299 RNF39Q9H2S5 420 aa11.32□□□□□ -0.6
ATP6V0A1-211ENST00000587299 ERCC6Q03468 1493 aa11.31□□□□□ -0.6
ATP6V0A1-211ENST00000587299 PBRM1Q86U86 1689 aa11.3□□□□□ -0.6
ATP6V0A1-211ENST00000587299 IGF1RP08069 1367 aa11.28□□□□□ -0.6
ATP6V0A1-211ENST00000587299 CEP162Q5TB80 1403 aa11.28□□□□□ -0.6
ATP6V0A1-211ENST00000587299 IFT140Q96RY7 1462 aa11.28□□□□□ -0.6
ATP6V0A1-211ENST00000587299 DCAF8L1A6NGE4 600 aa11.28□□□□□ -0.6
ATP6V0A1-211ENST00000587299 GAPVD1Q14C86 1478 aa11.25□□□□□ -0.61
ATP6V0A1-211ENST00000587299 EIF4G3O43432 1585 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms