RNA–Protein interactions for RNA: ENST00000587039.1

YIF1B-207, Transcript of Yip1 interacting factor homolog B, membrane trafficking protein, humanhuman

TSL 5

Gene YIF1B, Length 466 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1B-207ENST00000587039 NISCHQ9Y2I1 1504 aa38.54■■■■□ 3.76
YIF1B-207ENST00000587039 CCDC180Q9P1Z9 1646 aa34.19■■■■□ 3.06
YIF1B-207ENST00000587039 ABCC9O60706 1549 aa33.15■■■□□ 2.9
YIF1B-207ENST00000587039 ZCCHC6Q5VYS8 1495 aaKnown RBP32.16■■■□□ 2.74
YIF1B-207ENST00000587039 DCAF8L2P0C7V8 631 aa32.11■■■□□ 2.73
YIF1B-207ENST00000587039 NACADO15069 1562 aa32.09■■■□□ 2.73
YIF1B-207ENST00000587039 RB1CC1Q8TDY2 1594 aa32.07■■■□□ 2.72
YIF1B-207ENST00000587039 MYO15BQ96JP2 1530 aa32■■■□□ 2.71
YIF1B-207ENST00000587039 DCAF1Q9Y4B6 1507 aa31.95■■■□□ 2.7
YIF1B-207ENST00000587039 UNC13AQ9UPW8 1703 aa31.24■■■□□ 2.59
YIF1B-207ENST00000587039 SCRIBQ14160 1630 aa31.16■■■□□ 2.58
YIF1B-207ENST00000587039 PABPN1Q86U42 306 aaKnown RBP eCLIP31.01■■■□□ 2.55
YIF1B-207ENST00000587039 BICRAQ9NZM4 1560 aa30.99■■■□□ 2.55
YIF1B-207ENST00000587039 SHROOM4Q9ULL8 1493 aa30.82■■■□□ 2.53
YIF1B-207ENST00000587039 DNAJC5BQ9UF47 199 aa30.8■■■□□ 2.52
YIF1B-207ENST00000587039 EIF4G1Q04637 1599 aaKnown RBP30.2■■■□□ 2.43
YIF1B-207ENST00000587039 CC2D2AQ9P2K1 1620 aa30■■■□□ 2.39
YIF1B-207ENST00000587039 CECR2Q9BXF3 1484 aa29.94■■■□□ 2.38
YIF1B-207ENST00000587039 BAZ1AQ9NRL2 1556 aaPredicted RBP29.9■■■□□ 2.38
YIF1B-207ENST00000587039 SMARCA4P51532 1647 aa29.85■■■□□ 2.37
YIF1B-207ENST00000587039 MROH2BQ7Z745 1585 aa29.66■■■□□ 2.34
YIF1B-207ENST00000587039 SMARCA2P51531 1590 aa29.64■■■□□ 2.34
YIF1B-207ENST00000587039 ATAD2BQ9ULI0 1458 aa29.62■■■□□ 2.33
YIF1B-207ENST00000587039 NCAPD3P42695 1498 aa29.59■■■□□ 2.33
YIF1B-207ENST00000587039 PEG3Q9GZU2 1588 aa29.57■■■□□ 2.32
YIF1B-207ENST00000587039 HMGXB3Q12766 1538 aa29.48■■■□□ 2.31
YIF1B-207ENST00000587039 RSF1Q96T23 1441 aaPredicted RBP29.45■■■□□ 2.3
YIF1B-207ENST00000587039 BAZ1BQ9UIG0 1483 aaKnown RBP29.42■■■□□ 2.3
YIF1B-207ENST00000587039 WIZO95785 1651 aa29.36■■■□□ 2.29
YIF1B-207ENST00000587039 TOP2AP11388 1531 aaKnown RBP29.12■■■□□ 2.25
YIF1B-207ENST00000587039 SUPT5HO00267 1087 aaKnown RBP28.9■■■□□ 2.22
YIF1B-207ENST00000587039 DNAJC5Q9H3Z4 198 aa28.82■■■□□ 2.2
YIF1B-207ENST00000587039 LAMC3Q9Y6N6 1575 aa28.78■■■□□ 2.2
YIF1B-207ENST00000587039 CCDC88BA6NC98 1476 aa28.75■■■□□ 2.19
YIF1B-207ENST00000587039 CADPSQ9ULU8 1353 aa28.75■■■□□ 2.19
YIF1B-207ENST00000587039 NESP48681 1621 aa28.72■■■□□ 2.19
YIF1B-207ENST00000587039 CFTRP13569 1480 aa28.62■■■□□ 2.17
YIF1B-207ENST00000587039 ERCC6Q03468 1493 aa28.61■■■□□ 2.17
YIF1B-207ENST00000587039 PDS5BQ9NTI5 1447 aa28.6■■■□□ 2.17
YIF1B-207ENST00000587039 PRDM2Q13029 1718 aa28.42■■■□□ 2.14
YIF1B-207ENST00000587039 KIF21AQ7Z4S6 1674 aa28.41■■■□□ 2.14
YIF1B-207ENST00000587039 FANCD2Q9BXW9 1451 aa28.4■■■□□ 2.14
YIF1B-207ENST00000587039 CEP164Q9UPV0 1460 aa28.36■■■□□ 2.13
YIF1B-207ENST00000587039 THOC2Q8NI27 1593 aaKnown RBP28.27■■■□□ 2.12
YIF1B-207ENST00000587039 MRC2Q9UBG0 1479 aa28.27■■■□□ 2.12
YIF1B-207ENST00000587039 CUX2O14529 1486 aa28.22■■■□□ 2.11
YIF1B-207ENST00000587039 WDR62O43379 1518 aa28.15■■■□□ 2.1
YIF1B-207ENST00000587039 URB2Q14146 1524 aaKnown RBP28.06■■■□□ 2.08
YIF1B-207ENST00000587039 ABCC8Q09428 1581 aa28.06■■■□□ 2.08
YIF1B-207ENST00000587039 DNMBPQ6XZF7 1577 aa27.98■■■□□ 2.07
YIF1B-207ENST00000587039 TOPBP1Q92547 1522 aa27.97■■■□□ 2.07
YIF1B-207ENST00000587039 CUX1P39880 1505 aa27.82■■■□□ 2.04
YIF1B-207ENST00000587039 WRNQ14191 1432 aaPredicted RBP eCLIP27.79■■■□□ 2.04
YIF1B-207ENST00000587039 IFT140Q96RY7 1462 aa27.77■■■□□ 2.04
YIF1B-207ENST00000587039 POLA1P09884 1462 aaPredicted RBP27.74■■■□□ 2.03
YIF1B-207ENST00000587039 FGD5Q6ZNL6 1462 aa27.71■■■□□ 2.03
YIF1B-207ENST00000587039 TOP2BQ02880 1626 aa27.69■■■□□ 2.02
YIF1B-207ENST00000587039 BIVM-ERCC5R4GMW8 1640 aa27.67■■■□□ 2.02
YIF1B-207ENST00000587039 SOGA1O94964 1423 aa27.66■■■□□ 2.02
YIF1B-207ENST00000587039 SYNJ1O43426 1573 aa27.65■■■□□ 2.02
YIF1B-207ENST00000587039 TARBP1Q13395 1621 aaKnown RBP27.62■■■□□ 2.01
YIF1B-207ENST00000587039 RAD54L2Q9Y4B4 1467 aa27.59■■■□□ 2.01
YIF1B-207ENST00000587039 ZNF608Q9ULD9 1512 aaPredicted RBP27.54■■■□□ 2
YIF1B-207ENST00000587039 WDR97A6NE52 1622 aa27.51■■□□□ 1.99
YIF1B-207ENST00000587039 ABCA10Q8WWZ4 1543 aa27.48■■□□□ 1.99
YIF1B-207ENST00000587039 EIF4G3O43432 1585 aaKnown RBP27.48■■□□□ 1.99
YIF1B-207ENST00000587039 AQRO60306 1485 aaKnown RBP eCLIP27.44■■□□□ 1.981e-7■■■□□ 17.9
YIF1B-207ENST00000587039 TDRD9Q8NDG6 1382 aaKnown RBP27.44■■□□□ 1.98
YIF1B-207ENST00000587039 GAPVD1Q14C86 1478 aa27.34■■□□□ 1.97
YIF1B-207ENST00000587039 TRIM41Q8WV44 630 aa27.34■■□□□ 1.97
YIF1B-207ENST00000587039 ABCA5Q8WWZ7 1642 aa27.32■■□□□ 1.96
YIF1B-207ENST00000587039 GRIN2BQ13224 1484 aa27.32■■□□□ 1.96
YIF1B-207ENST00000587039 PBRM1Q86U86 1689 aa27.24■■□□□ 1.95
YIF1B-207ENST00000587039 MAGI1Q96QZ7 1491 aaPredicted RBP27.23■■□□□ 1.95
YIF1B-207ENST00000587039 KIF27Q86VH2 1401 aa27.22■■□□□ 1.95
YIF1B-207ENST00000587039 SNAPC4Q5SXM2 1469 aa27.21■■□□□ 1.95
YIF1B-207ENST00000587039 ERICH3Q5RHP9 1530 aa27.17■■□□□ 1.94
YIF1B-207ENST00000587039 CHIC1Q5VXU3 224 aa27.12■■□□□ 1.93
YIF1B-207ENST00000587039 FBLN2P98095 1184 aa27.11■■□□□ 1.93
YIF1B-207ENST00000587039 OSCARQ8IYS5 282 aa27.11■■□□□ 1.93
YIF1B-207ENST00000587039 SYNJ2O15056 1496 aa27.11■■□□□ 1.93
YIF1B-207ENST00000587039 CHMP7Q8WUX9 453 aaPredicted RBP27.1■■□□□ 1.93
YIF1B-207ENST00000587039 CHD1O14646 1710 aa27.07■■□□□ 1.92
YIF1B-207ENST00000587039 FHAD1B1AJZ9 1412 aa27.06■■□□□ 1.92
YIF1B-207ENST00000587039 ADAMTS12P58397 1594 aa27.05■■□□□ 1.92
YIF1B-207ENST00000587039 IGF1RP08069 1367 aa27.03■■□□□ 1.92
YIF1B-207ENST00000587039 CUL7Q14999 1698 aa26.98■■□□□ 1.91
YIF1B-207ENST00000587039 GRIN2AQ12879 1464 aa26.94■■□□□ 1.9
YIF1B-207ENST00000587039 RUSC2Q8N2Y8 1516 aa26.94■■□□□ 1.9
YIF1B-207ENST00000587039 EEA1Q15075 1411 aa26.9■■□□□ 1.9
YIF1B-207ENST00000587039 CARMIL1Q5VZK9 1371 aa26.9■■□□□ 1.9
YIF1B-207ENST00000587039 NUP160Q12769 1436 aa26.82■■□□□ 1.88
YIF1B-207ENST00000587039 CLASP1Q7Z460 1538 aa26.8■■□□□ 1.88
YIF1B-207ENST00000587039 CSRNP3Q8WYN3 585 aa26.79■■□□□ 1.88
YIF1B-207ENST00000587039 RAPGEF2Q9Y4G8 1499 aa26.78■■□□□ 1.88
YIF1B-207ENST00000587039 CEP170Q5SW79 1584 aa26.77■■□□□ 1.88
YIF1B-207ENST00000587039 PRXQ9BXM0 1461 aa26.72■■□□□ 1.87
YIF1B-207ENST00000587039 FAM9AQ8IZU1 332 aaPredicted RBP26.7■■□□□ 1.86
YIF1B-207ENST00000587039 KIAA0586Q9BVV6 1533 aa26.65■■□□□ 1.86
YIF1B-207ENST00000587039 ARHGEF11O15085 1522 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms