RNA–Protein interactions for RNA: ENST00000587009.5

UBXN6-203, Transcript of UBX domain protein 6, humanhuman

TSL 2

Gene UBXN6, Length 1,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN6-203ENST00000587009 NISCHQ9Y2I1 1504 aa43.86■■■■■ 4.61
UBXN6-203ENST00000587009 CCDC180Q9P1Z9 1646 aa38.73■■■■□ 3.79
UBXN6-203ENST00000587009 ABCC9O60706 1549 aa37.14■■■■□ 3.54
UBXN6-203ENST00000587009 ZCCHC6Q5VYS8 1495 aaKnown RBP36.87■■■■□ 3.49
UBXN6-203ENST00000587009 SHROOM4Q9ULL8 1493 aa36.55■■■■□ 3.44
UBXN6-203ENST00000587009 DCAF8L2P0C7V8 631 aa36.33■■■■□ 3.41
UBXN6-203ENST00000587009 DCAF1Q9Y4B6 1507 aa36.32■■■■□ 3.41
UBXN6-203ENST00000587009 NACADO15069 1562 aa36.2■■■■□ 3.38
UBXN6-203ENST00000587009 MYO15BQ96JP2 1530 aa36.19■■■■□ 3.38
UBXN6-203ENST00000587009 RB1CC1Q8TDY2 1594 aa36.07■■■■□ 3.36
UBXN6-203ENST00000587009 SUPT5HO00267 1087 aaKnown RBP35.72■■■■□ 3.31
UBXN6-203ENST00000587009 SCRIBQ14160 1630 aa35.39■■■■□ 3.26
UBXN6-203ENST00000587009 UNC13AQ9UPW8 1703 aa35.36■■■■□ 3.25
UBXN6-203ENST00000587009 BICRAQ9NZM4 1560 aa34.95■■■■□ 3.19
UBXN6-203ENST00000587009 PABPN1Q86U42 306 aaKnown RBP eCLIP34.8■■■■□ 3.16
UBXN6-203ENST00000587009 CHIC1Q5VXU3 224 aa34.73■■■■□ 3.15
UBXN6-203ENST00000587009 RSF1Q96T23 1441 aaPredicted RBP34.34■■■■□ 3.09
UBXN6-203ENST00000587009 CECR2Q9BXF3 1484 aa34.08■■■■□ 3.05
UBXN6-203ENST00000587009 EIF4G1Q04637 1599 aaKnown RBP33.96■■■■□ 3.03
UBXN6-203ENST00000587009 BAZ1AQ9NRL2 1556 aaPredicted RBP33.96■■■■□ 3.03
UBXN6-203ENST00000587009 SMARCA4P51532 1647 aa33.91■■■■□ 3.02
UBXN6-203ENST00000587009 MROH2BQ7Z745 1585 aa33.82■■■■□ 3.01
UBXN6-203ENST00000587009 CC2D2AQ9P2K1 1620 aa33.66■■■□□ 2.98
UBXN6-203ENST00000587009 WIZO95785 1651 aa33.56■■■□□ 2.96
UBXN6-203ENST00000587009 PEG3Q9GZU2 1588 aa33.55■■■□□ 2.96
UBXN6-203ENST00000587009 SMARCA2P51531 1590 aa33.52■■■□□ 2.96
UBXN6-203ENST00000587009 LOC105371045A0A1W2PR82 267 aa33.51■■■□□ 2.95
UBXN6-203ENST00000587009 ATAD2BQ9ULI0 1458 aa33.49■■■□□ 2.95
UBXN6-203ENST00000587009 TRIM41Q8WV44 630 aa33.47■■■□□ 2.95
UBXN6-203ENST00000587009 DNAJC5BQ9UF47 199 aa33.37■■■□□ 2.93
UBXN6-203ENST00000587009 NCAPD3P42695 1498 aa33.35■■■□□ 2.93
UBXN6-203ENST00000587009 HMGXB3Q12766 1538 aa33.3■■■□□ 2.92
UBXN6-203ENST00000587009 BAZ1BQ9UIG0 1483 aaKnown RBP33.28■■■□□ 2.92
UBXN6-203ENST00000587009 TOP2AP11388 1531 aaKnown RBP33.2■■■□□ 2.91
UBXN6-203ENST00000587009 PCGF6Q9BYE7 350 aa33.12■■■□□ 2.89
UBXN6-203ENST00000587009 HRCP23327 699 aa33.03■■■□□ 2.88
UBXN6-203ENST00000587009 CCDC88BA6NC98 1476 aa32.96■■■□□ 2.87
UBXN6-203ENST00000587009 FAM9AQ8IZU1 332 aaPredicted RBP32.95■■■□□ 2.87
UBXN6-203ENST00000587009 TRIM26Q12899 539 aaPredicted RBP32.8■■■□□ 2.84
UBXN6-203ENST00000587009 ABCC8Q09428 1581 aa32.62■■■□□ 2.81
UBXN6-203ENST00000587009 EHMT2Q96KQ7 1210 aa32.49■■■□□ 2.79
UBXN6-203ENST00000587009 CADPSQ9ULU8 1353 aa32.42■■■□□ 2.78
UBXN6-203ENST00000587009 LAMC3Q9Y6N6 1575 aa32.41■■■□□ 2.78
UBXN6-203ENST00000587009 CFTRP13569 1480 aa32.4■■■□□ 2.78
UBXN6-203ENST00000587009 NESP48681 1621 aa32.36■■■□□ 2.77
UBXN6-203ENST00000587009 EEA1Q15075 1411 aa32.35■■■□□ 2.77
UBXN6-203ENST00000587009 PRDM2Q13029 1718 aa32.35■■■□□ 2.77
UBXN6-203ENST00000587009 SOGA1O94964 1423 aa32.28■■■□□ 2.76
UBXN6-203ENST00000587009 WRNQ14191 1432 aaPredicted RBP eCLIP32.27■■■□□ 2.76
UBXN6-203ENST00000587009 CSRNP3Q8WYN3 585 aa32.17■■■□□ 2.74
UBXN6-203ENST00000587009 PPARGC1BQ86YN6 1023 aaKnown RBP32.14■■■□□ 2.74
UBXN6-203ENST00000587009 PDS5BQ9NTI5 1447 aa32.12■■■□□ 2.73
UBXN6-203ENST00000587009 TNIKQ9UKE5 1360 aa32.12■■■□□ 2.73
UBXN6-203ENST00000587009 RUSC2Q8N2Y8 1516 aa32.09■■■□□ 2.73
UBXN6-203ENST00000587009 FANCD2Q9BXW9 1451 aa32.08■■■□□ 2.73
UBXN6-203ENST00000587009 KIF21AQ7Z4S6 1674 aa32.07■■■□□ 2.73
UBXN6-203ENST00000587009 SYNJ1O43426 1573 aa32.07■■■□□ 2.72
UBXN6-203ENST00000587009 ZEB1P37275 1124 aaPredicted RBP32.05■■■□□ 2.72
UBXN6-203ENST00000587009 CEP162Q5TB80 1403 aa32.03■■■□□ 2.72
UBXN6-203ENST00000587009 GOLGA3Q08378 1498 aa31.98■■■□□ 2.71
UBXN6-203ENST00000587009 CEP164Q9UPV0 1460 aa31.98■■■□□ 2.71
UBXN6-203ENST00000587009 ERCC6Q03468 1493 aa31.96■■■□□ 2.71
UBXN6-203ENST00000587009 UBTFP17480 764 aaKnown RBP31.88■■■□□ 2.69
UBXN6-203ENST00000587009 KIF21BO75037 1637 aa31.84■■■□□ 2.69
UBXN6-203ENST00000587009 TOP2BQ02880 1626 aa31.82■■■□□ 2.68
UBXN6-203ENST00000587009 MRC2Q9UBG0 1479 aa31.77■■■□□ 2.68
UBXN6-203ENST00000587009 THOC2Q8NI27 1593 aaKnown RBP31.75■■■□□ 2.67
UBXN6-203ENST00000587009 BIVM-ERCC5R4GMW8 1640 aa31.73■■■□□ 2.67
UBXN6-203ENST00000587009 URB2Q14146 1524 aaKnown RBP31.72■■■□□ 2.67
UBXN6-203ENST00000587009 DNMBPQ6XZF7 1577 aa31.7■■■□□ 2.66
UBXN6-203ENST00000587009 CUX1P39880 1505 aa31.69■■■□□ 2.66
UBXN6-203ENST00000587009 WDR62O43379 1518 aa31.65■■■□□ 2.66
UBXN6-203ENST00000587009 TOPBP1Q92547 1522 aa31.65■■■□□ 2.66
UBXN6-203ENST00000587009 RAPGEF2Q9Y4G8 1499 aa31.55■■■□□ 2.64
UBXN6-203ENST00000587009 CLIP1P30622 1438 aa31.54■■■□□ 2.64
UBXN6-203ENST00000587009 FGD5Q6ZNL6 1462 aa31.46■■■□□ 2.63
UBXN6-203ENST00000587009 ERICH3Q5RHP9 1530 aa31.43■■■□□ 2.62
UBXN6-203ENST00000587009 POLA1P09884 1462 aaPredicted RBP31.43■■■□□ 2.62
UBXN6-203ENST00000587009 PRXQ9BXM0 1461 aa31.42■■■□□ 2.62
UBXN6-203ENST00000587009 VPS8Q8N3P4 1428 aa31.4■■■□□ 2.62
UBXN6-203ENST00000587009 TTBK1Q5TCY1 1321 aaPredicted RBP31.39■■■□□ 2.62
UBXN6-203ENST00000587009 KIF27Q86VH2 1401 aa31.36■■■□□ 2.61
UBXN6-203ENST00000587009 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.36■■■□□ 2.61
UBXN6-203ENST00000587009 CUX2O14529 1486 aa31.34■■■□□ 2.61
UBXN6-203ENST00000587009 CCER1Q8TC90 406 aaPredicted RBP31.34■■■□□ 2.61
UBXN6-203ENST00000587009 TARBP1Q13395 1621 aaKnown RBP31.28■■■□□ 2.6
UBXN6-203ENST00000587009 RAD54L2Q9Y4B4 1467 aa31.28■■■□□ 2.6
UBXN6-203ENST00000587009 IFT140Q96RY7 1462 aa31.26■■■□□ 2.59
UBXN6-203ENST00000587009 WDR97A6NE52 1622 aa31.23■■■□□ 2.59
UBXN6-203ENST00000587009 ABCA10Q8WWZ4 1543 aa31.19■■■□□ 2.58
UBXN6-203ENST00000587009 APLP2Q06481 763 aa31.18■■■□□ 2.58
UBXN6-203ENST00000587009 RANGAP1P46060 587 aaPredicted RBP31.1■■■□□ 2.57
UBXN6-203ENST00000587009 ARAP1Q96P48 1450 aa31.07■■■□□ 2.56
UBXN6-203ENST00000587009 ZNF608Q9ULD9 1512 aaPredicted RBP31.06■■■□□ 2.56
UBXN6-203ENST00000587009 ABCA5Q8WWZ7 1642 aa31.03■■■□□ 2.56
UBXN6-203ENST00000587009 TDRD9Q8NDG6 1382 aaKnown RBP31.02■■■□□ 2.56
UBXN6-203ENST00000587009 EIF4G3O43432 1585 aaKnown RBP31.02■■■□□ 2.56
UBXN6-203ENST00000587009 IGF1RP08069 1367 aa31.01■■■□□ 2.56
UBXN6-203ENST00000587009 AQRO60306 1485 aaKnown RBP eCLIP30.97■■■□□ 2.556e-7■■■□□ 16.5
UBXN6-203ENST00000587009 GAPVD1Q14C86 1478 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms