RNA–Protein interactions for RNA: ENST00000586945.5

RDH13-205, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-205ENST00000586945 NISCHQ9Y2I1 1504 aa26.53■■□□□ 1.84
RDH13-205ENST00000586945 CCDC180Q9P1Z9 1646 aa23.53■■□□□ 1.36
RDH13-205ENST00000586945 ABCC9O60706 1549 aa22.78■■□□□ 1.24
RDH13-205ENST00000586945 DCAF8L2P0C7V8 631 aa22.19■■□□□ 1.14
RDH13-205ENST00000586945 ZCCHC6Q5VYS8 1495 aaKnown RBP22.16■■□□□ 1.14
RDH13-205ENST00000586945 NACADO15069 1562 aa22.04■■□□□ 1.12
RDH13-205ENST00000586945 RB1CC1Q8TDY2 1594 aa22.04■■□□□ 1.12
RDH13-205ENST00000586945 DCAF1Q9Y4B6 1507 aa21.94■■□□□ 1.1
RDH13-205ENST00000586945 MYO15BQ96JP2 1530 aa21.93■■□□□ 1.1
RDH13-205ENST00000586945 SCRIBQ14160 1630 aa21.52■■□□□ 1.04
RDH13-205ENST00000586945 UNC13AQ9UPW8 1703 aa21.46■■□□□ 1.03
RDH13-205ENST00000586945 DNAJC5BQ9UF47 199 aa21.33■■□□□ 1.01
RDH13-205ENST00000586945 PABPN1Q86U42 306 aaKnown RBP eCLIP21.3■■□□□ 1
RDH13-205ENST00000586945 BICRAQ9NZM4 1560 aa21.25■□□□□ 0.99
RDH13-205ENST00000586945 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.98
RDH13-205ENST00000586945 EIF4G1Q04637 1599 aaKnown RBP20.74■□□□□ 0.91
RDH13-205ENST00000586945 BAZ1AQ9NRL2 1556 aaPredicted RBP20.6■□□□□ 0.89
RDH13-205ENST00000586945 CECR2Q9BXF3 1484 aa20.6■□□□□ 0.89
RDH13-205ENST00000586945 CC2D2AQ9P2K1 1620 aa20.6■□□□□ 0.89
RDH13-205ENST00000586945 SMARCA4P51532 1647 aa20.56■□□□□ 0.88
RDH13-205ENST00000586945 MROH2BQ7Z745 1585 aa20.44■□□□□ 0.86
RDH13-205ENST00000586945 SMARCA2P51531 1590 aa20.41■□□□□ 0.86
RDH13-205ENST00000586945 ATAD2BQ9ULI0 1458 aa20.35■□□□□ 0.85
RDH13-205ENST00000586945 PEG3Q9GZU2 1588 aa20.3■□□□□ 0.84
RDH13-205ENST00000586945 RSF1Q96T23 1441 aaPredicted RBP20.28■□□□□ 0.84
RDH13-205ENST00000586945 NCAPD3P42695 1498 aa20.28■□□□□ 0.84
RDH13-205ENST00000586945 BAZ1BQ9UIG0 1483 aaKnown RBP20.28■□□□□ 0.84
RDH13-205ENST00000586945 WIZO95785 1651 aa20.26■□□□□ 0.83
RDH13-205ENST00000586945 HMGXB3Q12766 1538 aa20.26■□□□□ 0.83
RDH13-205ENST00000586945 TOP2AP11388 1531 aaKnown RBP20.09■□□□□ 0.81
RDH13-205ENST00000586945 SUPT5HO00267 1087 aaKnown RBP20.08■□□□□ 0.81
RDH13-205ENST00000586945 DNAJC5Q9H3Z4 198 aa20.01■□□□□ 0.79
RDH13-205ENST00000586945 CCDC88BA6NC98 1476 aa19.8■□□□□ 0.76
RDH13-205ENST00000586945 LAMC3Q9Y6N6 1575 aa19.78■□□□□ 0.76
RDH13-205ENST00000586945 NESP48681 1621 aa19.74■□□□□ 0.75
RDH13-205ENST00000586945 CADPSQ9ULU8 1353 aa19.73■□□□□ 0.75
RDH13-205ENST00000586945 ERCC6Q03468 1493 aa19.7■□□□□ 0.74
RDH13-205ENST00000586945 PDS5BQ9NTI5 1447 aa19.66■□□□□ 0.74
RDH13-205ENST00000586945 CFTRP13569 1480 aa19.66■□□□□ 0.74
RDH13-205ENST00000586945 PRDM2Q13029 1718 aa19.6■□□□□ 0.73
RDH13-205ENST00000586945 KIF21AQ7Z4S6 1674 aa19.56■□□□□ 0.72
RDH13-205ENST00000586945 FANCD2Q9BXW9 1451 aa19.54■□□□□ 0.72
RDH13-205ENST00000586945 CEP164Q9UPV0 1460 aa19.54■□□□□ 0.72
RDH13-205ENST00000586945 MRC2Q9UBG0 1479 aa19.43■□□□□ 0.7
RDH13-205ENST00000586945 THOC2Q8NI27 1593 aaKnown RBP19.4■□□□□ 0.7
RDH13-205ENST00000586945 CUX2O14529 1486 aa19.35■□□□□ 0.69
RDH13-205ENST00000586945 WDR62O43379 1518 aa19.33■□□□□ 0.68
RDH13-205ENST00000586945 ABCC8Q09428 1581 aa19.29■□□□□ 0.68
RDH13-205ENST00000586945 URB2Q14146 1524 aaKnown RBP19.29■□□□□ 0.68
RDH13-205ENST00000586945 DNMBPQ6XZF7 1577 aa19.27■□□□□ 0.67
RDH13-205ENST00000586945 TOPBP1Q92547 1522 aa19.24■□□□□ 0.67
RDH13-205ENST00000586945 WRNQ14191 1432 aaPredicted RBP eCLIP19.19■□□□□ 0.66
RDH13-205ENST00000586945 CUX1P39880 1505 aa19.18■□□□□ 0.66
RDH13-205ENST00000586945 FGD5Q6ZNL6 1462 aa19.11■□□□□ 0.65
RDH13-205ENST00000586945 SYNJ1O43426 1573 aa19.1■□□□□ 0.65
RDH13-205ENST00000586945 TOP2BQ02880 1626 aa19.1■□□□□ 0.65
RDH13-205ENST00000586945 BIVM-ERCC5R4GMW8 1640 aa19.1■□□□□ 0.65
RDH13-205ENST00000586945 POLA1P09884 1462 aaPredicted RBP19.09■□□□□ 0.65
RDH13-205ENST00000586945 IFT140Q96RY7 1462 aa19.09■□□□□ 0.65
RDH13-205ENST00000586945 SOGA1O94964 1423 aa19.04■□□□□ 0.64
RDH13-205ENST00000586945 RAD54L2Q9Y4B4 1467 aa19■□□□□ 0.63
RDH13-205ENST00000586945 TARBP1Q13395 1621 aaKnown RBP18.98■□□□□ 0.63
RDH13-205ENST00000586945 TRIM41Q8WV44 630 aa18.96■□□□□ 0.63
RDH13-205ENST00000586945 EIF4G3O43432 1585 aaKnown RBP18.93■□□□□ 0.62
RDH13-205ENST00000586945 ZNF608Q9ULD9 1512 aaPredicted RBP18.92■□□□□ 0.62
RDH13-205ENST00000586945 WDR97A6NE52 1622 aa18.92■□□□□ 0.62
RDH13-205ENST00000586945 ABCA10Q8WWZ4 1543 aa18.9■□□□□ 0.62
RDH13-205ENST00000586945 TDRD9Q8NDG6 1382 aaKnown RBP18.88■□□□□ 0.61
RDH13-205ENST00000586945 AQRO60306 1485 aaKnown RBP eCLIP18.86■□□□□ 0.618e-7■■■■□ 24.2
RDH13-205ENST00000586945 GAPVD1Q14C86 1478 aa18.84■□□□□ 0.61
RDH13-205ENST00000586945 ABCA5Q8WWZ7 1642 aa18.82■□□□□ 0.6
RDH13-205ENST00000586945 PBRM1Q86U86 1689 aa18.81■□□□□ 0.6
RDH13-205ENST00000586945 GRIN2BQ13224 1484 aa18.8■□□□□ 0.6
RDH13-205ENST00000586945 KIF27Q86VH2 1401 aa18.8■□□□□ 0.6
RDH13-205ENST00000586945 CHIC1Q5VXU3 224 aa18.79■□□□□ 0.6
RDH13-205ENST00000586945 SNAPC4Q5SXM2 1469 aa18.75■□□□□ 0.59
RDH13-205ENST00000586945 MAGI1Q96QZ7 1491 aaPredicted RBP18.72■□□□□ 0.59
RDH13-205ENST00000586945 ERICH3Q5RHP9 1530 aa18.71■□□□□ 0.59
RDH13-205ENST00000586945 FBLN2P98095 1184 aa18.7■□□□□ 0.58
RDH13-205ENST00000586945 ADAMTS12P58397 1594 aa18.66■□□□□ 0.58
RDH13-205ENST00000586945 CHMP7Q8WUX9 453 aaPredicted RBP18.65■□□□□ 0.58
RDH13-205ENST00000586945 SYNJ2O15056 1496 aa18.64■□□□□ 0.57
RDH13-205ENST00000586945 CUL7Q14999 1698 aa18.63■□□□□ 0.57
RDH13-205ENST00000586945 CHD1O14646 1710 aa18.63■□□□□ 0.57
RDH13-205ENST00000586945 FHAD1B1AJZ9 1412 aa18.62■□□□□ 0.57
RDH13-205ENST00000586945 EEA1Q15075 1411 aa18.61■□□□□ 0.57
RDH13-205ENST00000586945 RUSC2Q8N2Y8 1516 aa18.6■□□□□ 0.57
RDH13-205ENST00000586945 FAM9AQ8IZU1 332 aaPredicted RBP18.58■□□□□ 0.56
RDH13-205ENST00000586945 IGF1RP08069 1367 aa18.57■□□□□ 0.56
RDH13-205ENST00000586945 GRIN2AQ12879 1464 aa18.55■□□□□ 0.56
RDH13-205ENST00000586945 OSCARQ8IYS5 282 aa18.55■□□□□ 0.56
RDH13-205ENST00000586945 CARMIL1Q5VZK9 1371 aa18.55■□□□□ 0.56
RDH13-205ENST00000586945 CSRNP3Q8WYN3 585 aa18.5■□□□□ 0.55
RDH13-205ENST00000586945 RAPGEF2Q9Y4G8 1499 aa18.48■□□□□ 0.55
RDH13-205ENST00000586945 CEP170Q5SW79 1584 aa18.43■□□□□ 0.54
RDH13-205ENST00000586945 NUP160Q12769 1436 aa18.41■□□□□ 0.54
RDH13-205ENST00000586945 PRXQ9BXM0 1461 aa18.41■□□□□ 0.54
RDH13-205ENST00000586945 CLASP1Q7Z460 1538 aa18.39■□□□□ 0.53
RDH13-205ENST00000586945 KIF21BO75037 1637 aa18.38■□□□□ 0.53
RDH13-205ENST00000586945 EHMT2Q96KQ7 1210 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms