RNA–Protein interactions for RNA: ENST00000586900.1

PKN1-208, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 550 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-208ENST00000586900 NISCHQ9Y2I1 1504 aa29.54■■■□□ 2.32
PKN1-208ENST00000586900 CCDC180Q9P1Z9 1646 aa26.17■■□□□ 1.78
PKN1-208ENST00000586900 ABCC9O60706 1549 aa25.29■■□□□ 1.64
PKN1-208ENST00000586900 ZCCHC6Q5VYS8 1495 aaKnown RBP24.65■■□□□ 1.54
PKN1-208ENST00000586900 NACADO15069 1562 aa24.55■■□□□ 1.52
PKN1-208ENST00000586900 MYO15BQ96JP2 1530 aa24.53■■□□□ 1.52
PKN1-208ENST00000586900 DCAF8L2P0C7V8 631 aa24.5■■□□□ 1.51
PKN1-208ENST00000586900 DCAF1Q9Y4B6 1507 aa24.5■■□□□ 1.51
PKN1-208ENST00000586900 RB1CC1Q8TDY2 1594 aa24.5■■□□□ 1.51
PKN1-208ENST00000586900 UNC13AQ9UPW8 1703 aa23.93■■□□□ 1.42
PKN1-208ENST00000586900 SCRIBQ14160 1630 aa23.82■■□□□ 1.4
PKN1-208ENST00000586900 BICRAQ9NZM4 1560 aa23.74■■□□□ 1.39
PKN1-208ENST00000586900 PABPN1Q86U42 306 aaKnown RBP eCLIP23.66■■□□□ 1.38
PKN1-208ENST00000586900 SHROOM4Q9ULL8 1493 aa23.57■■□□□ 1.36
PKN1-208ENST00000586900 EIF4G1Q04637 1599 aaKnown RBP23.08■■□□□ 1.29
PKN1-208ENST00000586900 DNAJC5BQ9UF47 199 aa23■■□□□ 1.27
PKN1-208ENST00000586900 CECR2Q9BXF3 1484 aa22.94■■□□□ 1.26
PKN1-208ENST00000586900 CC2D2AQ9P2K1 1620 aa22.92■■□□□ 1.26
PKN1-208ENST00000586900 BAZ1AQ9NRL2 1556 aaPredicted RBP22.88■■□□□ 1.25
PKN1-208ENST00000586900 SMARCA4P51532 1647 aa22.86■■□□□ 1.25
PKN1-208ENST00000586900 MROH2BQ7Z745 1585 aa22.74■■□□□ 1.23
PKN1-208ENST00000586900 SMARCA2P51531 1590 aa22.67■■□□□ 1.22
PKN1-208ENST00000586900 ATAD2BQ9ULI0 1458 aa22.67■■□□□ 1.22
PKN1-208ENST00000586900 PEG3Q9GZU2 1588 aa22.67■■□□□ 1.22
PKN1-208ENST00000586900 NCAPD3P42695 1498 aa22.66■■□□□ 1.22
PKN1-208ENST00000586900 RSF1Q96T23 1441 aaPredicted RBP22.58■■□□□ 1.21
PKN1-208ENST00000586900 HMGXB3Q12766 1538 aa22.56■■□□□ 1.2
PKN1-208ENST00000586900 WIZO95785 1651 aa22.5■■□□□ 1.19
PKN1-208ENST00000586900 BAZ1BQ9UIG0 1483 aaKnown RBP22.48■■□□□ 1.19
PKN1-208ENST00000586900 TOP2AP11388 1531 aaKnown RBP22.31■■□□□ 1.16
PKN1-208ENST00000586900 SUPT5HO00267 1087 aaKnown RBP22.14■■□□□ 1.13
PKN1-208ENST00000586900 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
PKN1-208ENST00000586900 LAMC3Q9Y6N6 1575 aa22■■□□□ 1.11
PKN1-208ENST00000586900 CADPSQ9ULU8 1353 aa21.99■■□□□ 1.11
PKN1-208ENST00000586900 NESP48681 1621 aa21.96■■□□□ 1.11
PKN1-208ENST00000586900 CFTRP13569 1480 aa21.91■■□□□ 1.1
PKN1-208ENST00000586900 PDS5BQ9NTI5 1447 aa21.85■■□□□ 1.09
PKN1-208ENST00000586900 ERCC6Q03468 1493 aa21.79■■□□□ 1.08
PKN1-208ENST00000586900 PRDM2Q13029 1718 aa21.77■■□□□ 1.08
PKN1-208ENST00000586900 KIF21AQ7Z4S6 1674 aa21.72■■□□□ 1.07
PKN1-208ENST00000586900 FANCD2Q9BXW9 1451 aa21.71■■□□□ 1.07
PKN1-208ENST00000586900 CEP164Q9UPV0 1460 aa21.66■■□□□ 1.06
PKN1-208ENST00000586900 THOC2Q8NI27 1593 aaKnown RBP21.61■■□□□ 1.05
PKN1-208ENST00000586900 MRC2Q9UBG0 1479 aa21.58■■□□□ 1.05
PKN1-208ENST00000586900 CUX2O14529 1486 aa21.52■■□□□ 1.04
PKN1-208ENST00000586900 WDR62O43379 1518 aa21.51■■□□□ 1.03
PKN1-208ENST00000586900 URB2Q14146 1524 aaKnown RBP21.47■■□□□ 1.03
PKN1-208ENST00000586900 ABCC8Q09428 1581 aa21.46■■□□□ 1.03
PKN1-208ENST00000586900 DNMBPQ6XZF7 1577 aa21.4■■□□□ 1.02
PKN1-208ENST00000586900 TOPBP1Q92547 1522 aa21.39■■□□□ 1.02
PKN1-208ENST00000586900 CUX1P39880 1505 aa21.31■■□□□ 1
PKN1-208ENST00000586900 WRNQ14191 1432 aaPredicted RBP eCLIP21.29■■□□□ 1
PKN1-208ENST00000586900 POLA1P09884 1462 aaPredicted RBP21.23■□□□□ 0.99
PKN1-208ENST00000586900 TOP2BQ02880 1626 aa21.22■□□□□ 0.99
PKN1-208ENST00000586900 BIVM-ERCC5R4GMW8 1640 aa21.22■□□□□ 0.99
PKN1-208ENST00000586900 IFT140Q96RY7 1462 aa21.22■□□□□ 0.99
PKN1-208ENST00000586900 FGD5Q6ZNL6 1462 aa21.2■□□□□ 0.98
PKN1-208ENST00000586900 SYNJ1O43426 1573 aa21.19■□□□□ 0.98
PKN1-208ENST00000586900 TARBP1Q13395 1621 aaKnown RBP21.15■□□□□ 0.98
PKN1-208ENST00000586900 SOGA1O94964 1423 aa21.15■□□□□ 0.98
PKN1-208ENST00000586900 RAD54L2Q9Y4B4 1467 aa21.11■□□□□ 0.97
PKN1-208ENST00000586900 ZNF608Q9ULD9 1512 aaPredicted RBP21.05■□□□□ 0.96
PKN1-208ENST00000586900 WDR97A6NE52 1622 aa21.05■□□□□ 0.96
PKN1-208ENST00000586900 ABCA10Q8WWZ4 1543 aa21.04■□□□□ 0.96
PKN1-208ENST00000586900 EIF4G3O43432 1585 aaKnown RBP21■□□□□ 0.95
PKN1-208ENST00000586900 AQRO60306 1485 aaKnown RBP eCLIP20.98■□□□□ 0.958e-7■■■■■ 28.7
PKN1-208ENST00000586900 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
PKN1-208ENST00000586900 TRIM41Q8WV44 630 aa20.94■□□□□ 0.94
PKN1-208ENST00000586900 ABCA5Q8WWZ7 1642 aa20.93■□□□□ 0.94
PKN1-208ENST00000586900 GAPVD1Q14C86 1478 aa20.91■□□□□ 0.94
PKN1-208ENST00000586900 GRIN2BQ13224 1484 aa20.88■□□□□ 0.93
PKN1-208ENST00000586900 CHIC1Q5VXU3 224 aa20.85■□□□□ 0.93
PKN1-208ENST00000586900 PBRM1Q86U86 1689 aa20.84■□□□□ 0.93
PKN1-208ENST00000586900 KIF27Q86VH2 1401 aa20.83■□□□□ 0.93
PKN1-208ENST00000586900 MAGI1Q96QZ7 1491 aaPredicted RBP20.81■□□□□ 0.92
PKN1-208ENST00000586900 ERICH3Q5RHP9 1530 aa20.81■□□□□ 0.92
PKN1-208ENST00000586900 SNAPC4Q5SXM2 1469 aa20.79■□□□□ 0.92
PKN1-208ENST00000586900 SYNJ2O15056 1496 aa20.72■□□□□ 0.91
PKN1-208ENST00000586900 IGF1RP08069 1367 aa20.72■□□□□ 0.91
PKN1-208ENST00000586900 FHAD1B1AJZ9 1412 aa20.7■□□□□ 0.9
PKN1-208ENST00000586900 ADAMTS12P58397 1594 aa20.69■□□□□ 0.9
PKN1-208ENST00000586900 CHD1O14646 1710 aa20.68■□□□□ 0.9
PKN1-208ENST00000586900 CHMP7Q8WUX9 453 aaPredicted RBP20.68■□□□□ 0.9
PKN1-208ENST00000586900 RUSC2Q8N2Y8 1516 aa20.68■□□□□ 0.9
PKN1-208ENST00000586900 OSCARQ8IYS5 282 aa20.67■□□□□ 0.9
PKN1-208ENST00000586900 CUL7Q14999 1698 aa20.66■□□□□ 0.9
PKN1-208ENST00000586900 FBLN2P98095 1184 aa20.65■□□□□ 0.9
PKN1-208ENST00000586900 EEA1Q15075 1411 aa20.63■□□□□ 0.89
PKN1-208ENST00000586900 GRIN2AQ12879 1464 aa20.61■□□□□ 0.89
PKN1-208ENST00000586900 CARMIL1Q5VZK9 1371 aa20.59■□□□□ 0.89
PKN1-208ENST00000586900 DNAJC5Q9H3Z4 198 aa20.57■□□□□ 0.88
PKN1-208ENST00000586900 CSRNP3Q8WYN3 585 aa20.54■□□□□ 0.88
PKN1-208ENST00000586900 NUP160Q12769 1436 aa20.53■□□□□ 0.88
PKN1-208ENST00000586900 RAPGEF2Q9Y4G8 1499 aa20.5■□□□□ 0.87
PKN1-208ENST00000586900 PRXQ9BXM0 1461 aa20.5■□□□□ 0.87
PKN1-208ENST00000586900 CLASP1Q7Z460 1538 aa20.49■□□□□ 0.87
PKN1-208ENST00000586900 CEP170Q5SW79 1584 aa20.48■□□□□ 0.87
PKN1-208ENST00000586900 FAM9AQ8IZU1 332 aaPredicted RBP20.44■□□□□ 0.86
PKN1-208ENST00000586900 KIAA0586Q9BVV6 1533 aa20.39■□□□□ 0.85
PKN1-208ENST00000586900 KIF21BO75037 1637 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms