RNA–Protein interactions for RNA: ENST00000586679.1

MBD1-214, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-214ENST00000586679 NISCHQ9Y2I1 1504 aa37.55■■■■□ 3.6
MBD1-214ENST00000586679 CCDC180Q9P1Z9 1646 aa33.17■■■□□ 2.9
MBD1-214ENST00000586679 ABCC9O60706 1549 aa32.26■■■□□ 2.75
MBD1-214ENST00000586679 ZCCHC6Q5VYS8 1495 aaKnown RBP31.33■■■□□ 2.61
MBD1-214ENST00000586679 DCAF8L2P0C7V8 631 aa31.28■■■□□ 2.6
MBD1-214ENST00000586679 NACADO15069 1562 aa31.13■■■□□ 2.57
MBD1-214ENST00000586679 RB1CC1Q8TDY2 1594 aa31.09■■■□□ 2.57
MBD1-214ENST00000586679 MYO15BQ96JP2 1530 aa31.04■■■□□ 2.56
MBD1-214ENST00000586679 DCAF1Q9Y4B6 1507 aa31.04■■■□□ 2.56
MBD1-214ENST00000586679 UNC13AQ9UPW8 1703 aa30.44■■■□□ 2.46
MBD1-214ENST00000586679 SCRIBQ14160 1630 aa30.36■■■□□ 2.45
MBD1-214ENST00000586679 PABPN1Q86U42 306 aaKnown RBP eCLIP30.24■■■□□ 2.43
MBD1-214ENST00000586679 BICRAQ9NZM4 1560 aa30.22■■■□□ 2.43
MBD1-214ENST00000586679 SHROOM4Q9ULL8 1493 aa29.91■■■□□ 2.38
MBD1-214ENST00000586679 DNAJC5BQ9UF47 199 aa29.4■■■□□ 2.3
MBD1-214ENST00000586679 EIF4G1Q04637 1599 aaKnown RBP29.36■■■□□ 2.29
MBD1-214ENST00000586679 CECR2Q9BXF3 1484 aa29.27■■■□□ 2.28
MBD1-214ENST00000586679 CC2D2AQ9P2K1 1620 aa29.17■■■□□ 2.26
MBD1-214ENST00000586679 SMARCA4P51532 1647 aa29.05■■■□□ 2.24
MBD1-214ENST00000586679 BAZ1AQ9NRL2 1556 aaPredicted RBP29.05■■■□□ 2.24
MBD1-214ENST00000586679 MROH2BQ7Z745 1585 aa28.98■■■□□ 2.23
MBD1-214ENST00000586679 ATAD2BQ9ULI0 1458 aa28.84■■■□□ 2.21
MBD1-214ENST00000586679 SMARCA2P51531 1590 aa28.76■■■□□ 2.19
MBD1-214ENST00000586679 NCAPD3P42695 1498 aa28.76■■■□□ 2.19
MBD1-214ENST00000586679 RSF1Q96T23 1441 aaPredicted RBP28.76■■■□□ 2.19
MBD1-214ENST00000586679 PEG3Q9GZU2 1588 aa28.75■■■□□ 2.19
MBD1-214ENST00000586679 WIZO95785 1651 aa28.68■■■□□ 2.18
MBD1-214ENST00000586679 HMGXB3Q12766 1538 aa28.61■■■□□ 2.17
MBD1-214ENST00000586679 BAZ1BQ9UIG0 1483 aaKnown RBP28.59■■■□□ 2.17
MBD1-214ENST00000586679 TOP2AP11388 1531 aaKnown RBP28.34■■■□□ 2.13
MBD1-214ENST00000586679 SUPT5HO00267 1087 aaKnown RBP28.28■■■□□ 2.12
MBD1-214ENST00000586679 CCDC88BA6NC98 1476 aa28.06■■■□□ 2.08
MBD1-214ENST00000586679 NESP48681 1621 aa28.03■■■□□ 2.08
MBD1-214ENST00000586679 CADPSQ9ULU8 1353 aa27.95■■■□□ 2.06
MBD1-214ENST00000586679 LAMC3Q9Y6N6 1575 aa27.92■■■□□ 2.06
MBD1-214ENST00000586679 CFTRP13569 1480 aa27.84■■■□□ 2.05
MBD1-214ENST00000586679 ERCC6Q03468 1493 aa27.72■■■□□ 2.03
MBD1-214ENST00000586679 PDS5BQ9NTI5 1447 aa27.72■■■□□ 2.03
MBD1-214ENST00000586679 KIF21AQ7Z4S6 1674 aa27.66■■■□□ 2.02
MBD1-214ENST00000586679 FANCD2Q9BXW9 1451 aa27.63■■■□□ 2.01
MBD1-214ENST00000586679 PRDM2Q13029 1718 aa27.6■■■□□ 2.01
MBD1-214ENST00000586679 CEP164Q9UPV0 1460 aa27.53■■■□□ 2
MBD1-214ENST00000586679 THOC2Q8NI27 1593 aaKnown RBP27.49■■□□□ 1.99
MBD1-214ENST00000586679 MRC2Q9UBG0 1479 aa27.44■■□□□ 1.98
MBD1-214ENST00000586679 URB2Q14146 1524 aaKnown RBP27.36■■□□□ 1.97
MBD1-214ENST00000586679 WDR62O43379 1518 aa27.34■■□□□ 1.97
MBD1-214ENST00000586679 CUX2O14529 1486 aa27.31■■□□□ 1.96
MBD1-214ENST00000586679 TOPBP1Q92547 1522 aa27.22■■□□□ 1.95
MBD1-214ENST00000586679 DNMBPQ6XZF7 1577 aa27.19■■□□□ 1.94
MBD1-214ENST00000586679 ABCC8Q09428 1581 aa27.18■■□□□ 1.94
MBD1-214ENST00000586679 CUX1P39880 1505 aa27.16■■□□□ 1.94
MBD1-214ENST00000586679 WRNQ14191 1432 aaPredicted RBP eCLIP27.07■■□□□ 1.92
MBD1-214ENST00000586679 SYNJ1O43426 1573 aa27.01■■□□□ 1.92
MBD1-214ENST00000586679 POLA1P09884 1462 aaPredicted RBP27.01■■□□□ 1.91
MBD1-214ENST00000586679 FGD5Q6ZNL6 1462 aa27■■□□□ 1.91
MBD1-214ENST00000586679 TOP2BQ02880 1626 aa26.97■■□□□ 1.91
MBD1-214ENST00000586679 BIVM-ERCC5R4GMW8 1640 aa26.97■■□□□ 1.91
MBD1-214ENST00000586679 IFT140Q96RY7 1462 aa26.95■■□□□ 1.91
MBD1-214ENST00000586679 RAD54L2Q9Y4B4 1467 aa26.93■■□□□ 1.9
MBD1-214ENST00000586679 SOGA1O94964 1423 aa26.91■■□□□ 1.9
MBD1-214ENST00000586679 TARBP1Q13395 1621 aaKnown RBP26.9■■□□□ 1.9
MBD1-214ENST00000586679 ZNF608Q9ULD9 1512 aaPredicted RBP26.86■■□□□ 1.89
MBD1-214ENST00000586679 TDRD9Q8NDG6 1382 aaKnown RBP26.75■■□□□ 1.87
MBD1-214ENST00000586679 WDR97A6NE52 1622 aa26.75■■□□□ 1.87
MBD1-214ENST00000586679 AQRO60306 1485 aaKnown RBP eCLIP26.74■■□□□ 1.872e-8■■■■■ 42.3
MBD1-214ENST00000586679 ABCA10Q8WWZ4 1543 aa26.73■■□□□ 1.87
MBD1-214ENST00000586679 EIF4G3O43432 1585 aaKnown RBP26.72■■□□□ 1.87
MBD1-214ENST00000586679 TRIM41Q8WV44 630 aa26.66■■□□□ 1.86
MBD1-214ENST00000586679 ABCA5Q8WWZ7 1642 aa26.6■■□□□ 1.85
MBD1-214ENST00000586679 GAPVD1Q14C86 1478 aa26.6■■□□□ 1.85
MBD1-214ENST00000586679 CHIC1Q5VXU3 224 aa26.59■■□□□ 1.85
MBD1-214ENST00000586679 GRIN2BQ13224 1484 aa26.53■■□□□ 1.84
MBD1-214ENST00000586679 PBRM1Q86U86 1689 aa26.5■■□□□ 1.83
MBD1-214ENST00000586679 SNAPC4Q5SXM2 1469 aa26.49■■□□□ 1.83
MBD1-214ENST00000586679 KIF27Q86VH2 1401 aa26.46■■□□□ 1.83
MBD1-214ENST00000586679 RUSC2Q8N2Y8 1516 aa26.43■■□□□ 1.82
MBD1-214ENST00000586679 MAGI1Q96QZ7 1491 aaPredicted RBP26.41■■□□□ 1.82
MBD1-214ENST00000586679 ERICH3Q5RHP9 1530 aa26.4■■□□□ 1.82
MBD1-214ENST00000586679 IGF1RP08069 1367 aa26.37■■□□□ 1.81
MBD1-214ENST00000586679 FBLN2P98095 1184 aa26.34■■□□□ 1.81
MBD1-214ENST00000586679 ADAMTS12P58397 1594 aa26.33■■□□□ 1.8
MBD1-214ENST00000586679 SYNJ2O15056 1496 aa26.32■■□□□ 1.8
MBD1-214ENST00000586679 CHD1O14646 1710 aa26.32■■□□□ 1.8
MBD1-214ENST00000586679 CHMP7Q8WUX9 453 aaPredicted RBP26.3■■□□□ 1.8
MBD1-214ENST00000586679 FHAD1B1AJZ9 1412 aa26.29■■□□□ 1.8
MBD1-214ENST00000586679 OSCARQ8IYS5 282 aa26.27■■□□□ 1.8
MBD1-214ENST00000586679 GRIN2AQ12879 1464 aa26.21■■□□□ 1.79
MBD1-214ENST00000586679 CUL7Q14999 1698 aa26.2■■□□□ 1.78
MBD1-214ENST00000586679 CARMIL1Q5VZK9 1371 aa26.2■■□□□ 1.78
MBD1-214ENST00000586679 DNAJC5Q9H3Z4 198 aa26.16■■□□□ 1.78
MBD1-214ENST00000586679 FAM9AQ8IZU1 332 aaPredicted RBP26.15■■□□□ 1.78
MBD1-214ENST00000586679 CSRNP3Q8WYN3 585 aa26.13■■□□□ 1.77
MBD1-214ENST00000586679 EEA1Q15075 1411 aa26.13■■□□□ 1.77
MBD1-214ENST00000586679 CEP170Q5SW79 1584 aa26.08■■□□□ 1.77
MBD1-214ENST00000586679 NUP160Q12769 1436 aa26.08■■□□□ 1.77
MBD1-214ENST00000586679 PRXQ9BXM0 1461 aa26.06■■□□□ 1.76
MBD1-214ENST00000586679 RAPGEF2Q9Y4G8 1499 aa26.06■■□□□ 1.76
MBD1-214ENST00000586679 CLASP1Q7Z460 1538 aa26.06■■□□□ 1.76
MBD1-214ENST00000586679 KIAA0586Q9BVV6 1533 aa25.89■■□□□ 1.74
MBD1-214ENST00000586679 KIF21BO75037 1637 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms