RNA–Protein interactions for RNA: ENST00000586589.5

BECN1-205, Transcript of beclin 1, humanhuman

TSL 3

Gene BECN1, Length 731 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BECN1-205ENST00000586589 NISCHQ9Y2I1 1504 aa17.85■□□□□ 0.45
BECN1-205ENST00000586589 CCDC180Q9P1Z9 1646 aa15.48■□□□□ 0.07
BECN1-205ENST00000586589 ABCC9O60706 1549 aa15.44■□□□□ 0.06
BECN1-205ENST00000586589 ZCCHC6Q5VYS8 1495 aaKnown RBP15.06■□□□□ 0
BECN1-205ENST00000586589 DCAF1Q9Y4B6 1507 aa14.85□□□□□ -0.03
BECN1-205ENST00000586589 DNAJC5BQ9UF47 199 aa14.73□□□□□ -0.05
BECN1-205ENST00000586589 SHROOM4Q9ULL8 1493 aa14.62□□□□□ -0.07
BECN1-205ENST00000586589 RB1CC1Q8TDY2 1594 aa14.61□□□□□ -0.07
BECN1-205ENST00000586589 MYO15BQ96JP2 1530 aa14.57□□□□□ -0.08
BECN1-205ENST00000586589 DCAF8L2P0C7V8 631 aa14.52□□□□□ -0.09
BECN1-205ENST00000586589 NACADO15069 1562 aa14.48□□□□□ -0.09
BECN1-205ENST00000586589 PABPN1Q86U42 306 aaKnown RBP eCLIP14.3□□□□□ -0.12
BECN1-205ENST00000586589 UNC13AQ9UPW8 1703 aa14.26□□□□□ -0.13
BECN1-205ENST00000586589 BICRAQ9NZM4 1560 aa14.26□□□□□ -0.13
BECN1-205ENST00000586589 SUPT5HO00267 1087 aaKnown RBP14.25□□□□□ -0.13
BECN1-205ENST00000586589 SCRIBQ14160 1630 aa14.15□□□□□ -0.14
BECN1-205ENST00000586589 CECR2Q9BXF3 1484 aa13.95□□□□□ -0.18
BECN1-205ENST00000586589 CC2D2AQ9P2K1 1620 aa13.95□□□□□ -0.18
BECN1-205ENST00000586589 RSF1Q96T23 1441 aaPredicted RBP13.94□□□□□ -0.18
BECN1-205ENST00000586589 EIF4G1Q04637 1599 aaKnown RBP13.89□□□□□ -0.19
BECN1-205ENST00000586589 CHIC1Q5VXU3 224 aa13.87□□□□□ -0.19
BECN1-205ENST00000586589 BAZ1AQ9NRL2 1556 aaPredicted RBP13.79□□□□□ -0.2
BECN1-205ENST00000586589 MROH2BQ7Z745 1585 aa13.75□□□□□ -0.21
BECN1-205ENST00000586589 DNAJC5Q9H3Z4 198 aa13.69□□□□□ -0.22
BECN1-205ENST00000586589 WIZO95785 1651 aa13.66□□□□□ -0.22
BECN1-205ENST00000586589 SMARCA4P51532 1647 aa13.65□□□□□ -0.22
BECN1-205ENST00000586589 TOP2AP11388 1531 aaKnown RBP13.58□□□□□ -0.24
BECN1-205ENST00000586589 PEG3Q9GZU2 1588 aa13.53□□□□□ -0.24
BECN1-205ENST00000586589 TRIM41Q8WV44 630 aa13.46□□□□□ -0.25
BECN1-205ENST00000586589 CUX2O14529 1486 aa13.46□□□□□ -0.25
BECN1-205ENST00000586589 SMARCA2P51531 1590 aa13.43□□□□□ -0.26
BECN1-205ENST00000586589 CCDC88BA6NC98 1476 aa13.41□□□□□ -0.26
BECN1-205ENST00000586589 NCAPD3P42695 1498 aa13.4□□□□□ -0.26
BECN1-205ENST00000586589 ATAD2BQ9ULI0 1458 aa13.34□□□□□ -0.27
BECN1-205ENST00000586589 ERCC6Q03468 1493 aa13.32□□□□□ -0.28
BECN1-205ENST00000586589 BAZ1BQ9UIG0 1483 aaKnown RBP13.29□□□□□ -0.28
BECN1-205ENST00000586589 HMGXB3Q12766 1538 aa13.28□□□□□ -0.28
BECN1-205ENST00000586589 LOC105371045A0A1W2PR82 267 aa13.27□□□□□ -0.29
BECN1-205ENST00000586589 NESP48681 1621 aa13.22□□□□□ -0.29
BECN1-205ENST00000586589 EEA1Q15075 1411 aa13.18□□□□□ -0.3
BECN1-205ENST00000586589 ABCC8Q09428 1581 aa13.18□□□□□ -0.3
BECN1-205ENST00000586589 THOC2Q8NI27 1593 aaKnown RBP13.17□□□□□ -0.3
BECN1-205ENST00000586589 WRNQ14191 1432 aaPredicted RBP eCLIP13.13□□□□□ -0.31
BECN1-205ENST00000586589 FAM9AQ8IZU1 332 aaPredicted RBP13.12□□□□□ -0.31
BECN1-205ENST00000586589 LAMC3Q9Y6N6 1575 aa13.1□□□□□ -0.31
BECN1-205ENST00000586589 TRIM26Q12899 539 aaPredicted RBP13.05□□□□□ -0.32
BECN1-205ENST00000586589 PCGF6Q9BYE7 350 aa13.03□□□□□ -0.32
BECN1-205ENST00000586589 SYNJ1O43426 1573 aa13.03□□□□□ -0.32
BECN1-205ENST00000586589 PDS5BQ9NTI5 1447 aa13.01□□□□□ -0.33
BECN1-205ENST00000586589 TOP2BQ02880 1626 aa13.01□□□□□ -0.33
BECN1-205ENST00000586589 KIF21AQ7Z4S6 1674 aa13.01□□□□□ -0.33
BECN1-205ENST00000586589 SOGA1O94964 1423 aa13□□□□□ -0.33
BECN1-205ENST00000586589 CSRNP3Q8WYN3 585 aa13□□□□□ -0.33
BECN1-205ENST00000586589 BIVM-ERCC5R4GMW8 1640 aa12.99□□□□□ -0.33
BECN1-205ENST00000586589 CFTRP13569 1480 aa12.99□□□□□ -0.33
BECN1-205ENST00000586589 TNIKQ9UKE5 1360 aa12.98□□□□□ -0.33
BECN1-205ENST00000586589 PRDM2Q13029 1718 aa12.98□□□□□ -0.33
BECN1-205ENST00000586589 HRCP23327 699 aa12.96□□□□□ -0.33
BECN1-205ENST00000586589 GOLGA3Q08378 1498 aa12.96□□□□□ -0.34
BECN1-205ENST00000586589 KIF21BO75037 1637 aa12.95□□□□□ -0.34
BECN1-205ENST00000586589 CADPSQ9ULU8 1353 aa12.94□□□□□ -0.34
BECN1-205ENST00000586589 WDR62O43379 1518 aa12.94□□□□□ -0.34
BECN1-205ENST00000586589 MRC2Q9UBG0 1479 aa12.93□□□□□ -0.34
BECN1-205ENST00000586589 CEP164Q9UPV0 1460 aa12.93□□□□□ -0.34
BECN1-205ENST00000586589 RUSC2Q8N2Y8 1516 aa12.91□□□□□ -0.34
BECN1-205ENST00000586589 CEP162Q5TB80 1403 aa12.88□□□□□ -0.35
BECN1-205ENST00000586589 CUX1P39880 1505 aa12.84□□□□□ -0.35
BECN1-205ENST00000586589 EHMT2Q96KQ7 1210 aa12.84□□□□□ -0.35
BECN1-205ENST00000586589 UBTFP17480 764 aaKnown RBP12.83□□□□□ -0.36
BECN1-205ENST00000586589 ERICH3Q5RHP9 1530 aa12.83□□□□□ -0.36
BECN1-205ENST00000586589 KIF27Q86VH2 1401 aa12.79□□□□□ -0.36
BECN1-205ENST00000586589 FANCD2Q9BXW9 1451 aa12.79□□□□□ -0.36
BECN1-205ENST00000586589 ZEB1P37275 1124 aaPredicted RBP12.77□□□□□ -0.37
BECN1-205ENST00000586589 PRXQ9BXM0 1461 aa12.77□□□□□ -0.37
BECN1-205ENST00000586589 RAPGEF2Q9Y4G8 1499 aa12.74□□□□□ -0.37
BECN1-205ENST00000586589 CLIP1P30622 1438 aa12.73□□□□□ -0.37
BECN1-205ENST00000586589 OSCARQ8IYS5 282 aa12.72□□□□□ -0.37
BECN1-205ENST00000586589 URB2Q14146 1524 aaKnown RBP12.72□□□□□ -0.37
BECN1-205ENST00000586589 VPS8Q8N3P4 1428 aa12.69□□□□□ -0.38
BECN1-205ENST00000586589 DNMBPQ6XZF7 1577 aa12.69□□□□□ -0.38
BECN1-205ENST00000586589 FGD5Q6ZNL6 1462 aa12.66□□□□□ -0.38
BECN1-205ENST00000586589 RIMBP3CA6NJZ7 1639 aa12.62□□□□□ -0.39
BECN1-205ENST00000586589 RIMBP3BA6NNM3 1639 aa12.62□□□□□ -0.39
BECN1-205ENST00000586589 RIMBP3Q9UFD9 1639 aa12.62□□□□□ -0.39
BECN1-205ENST00000586589 IGF1RP08069 1367 aa12.61□□□□□ -0.39
BECN1-205ENST00000586589 TOPBP1Q92547 1522 aa12.61□□□□□ -0.39
BECN1-205ENST00000586589 ABCA10Q8WWZ4 1543 aa12.6□□□□□ -0.39
BECN1-205ENST00000586589 ZNF608Q9ULD9 1512 aaPredicted RBP12.59□□□□□ -0.39
BECN1-205ENST00000586589 IFT140Q96RY7 1462 aa12.59□□□□□ -0.39
BECN1-205ENST00000586589 ARHGEF11O15085 1522 aa12.58□□□□□ -0.4
BECN1-205ENST00000586589 APLP2Q06481 763 aa12.58□□□□□ -0.4
BECN1-205ENST00000586589 PPARGC1BQ86YN6 1023 aaKnown RBP12.56□□□□□ -0.4
BECN1-205ENST00000586589 POLA1P09884 1462 aaPredicted RBP12.56□□□□□ -0.4
BECN1-205ENST00000586589 CARMIL1Q5VZK9 1371 aa12.56□□□□□ -0.4
BECN1-205ENST00000586589 CUL7Q14999 1698 aa12.54□□□□□ -0.4
BECN1-205ENST00000586589 ARAP1Q96P48 1450 aa12.54□□□□□ -0.4
BECN1-205ENST00000586589 WDR97A6NE52 1622 aa12.52□□□□□ -0.4
BECN1-205ENST00000586589 EIF4G3O43432 1585 aaKnown RBP12.51□□□□□ -0.41
BECN1-205ENST00000586589 ARHGAP35Q9NRY4 1499 aa12.5□□□□□ -0.41
BECN1-205ENST00000586589 MAP3K1Q13233 1512 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms