RNA–Protein interactions for RNA: ENST00000586557.5

PKN1-207, Transcript of protein kinase N1, humanhuman

TSL 5

Gene PKN1, Length 899 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-207ENST00000586557 NISCHQ9Y2I1 1504 aa53.49■■■■■ 6.15
PKN1-207ENST00000586557 CCDC180Q9P1Z9 1646 aa47.4■■■■■ 5.18
PKN1-207ENST00000586557 ABCC9O60706 1549 aa46.07■■■■■ 4.97
PKN1-207ENST00000586557 ZCCHC6Q5VYS8 1495 aaKnown RBP44.66■■■■■ 4.74
PKN1-207ENST00000586557 DCAF8L2P0C7V8 631 aa44.5■■■■■ 4.71
PKN1-207ENST00000586557 NACADO15069 1562 aa44.49■■■■■ 4.71
PKN1-207ENST00000586557 RB1CC1Q8TDY2 1594 aa44.45■■■■■ 4.71
PKN1-207ENST00000586557 MYO15BQ96JP2 1530 aa44.34■■■■■ 4.69
PKN1-207ENST00000586557 DCAF1Q9Y4B6 1507 aa44.28■■■■■ 4.68
PKN1-207ENST00000586557 UNC13AQ9UPW8 1703 aa43.44■■■■■ 4.54
PKN1-207ENST00000586557 SCRIBQ14160 1630 aa43.29■■■■■ 4.52
PKN1-207ENST00000586557 BICRAQ9NZM4 1560 aa43.12■■■■■ 4.49
PKN1-207ENST00000586557 PABPN1Q86U42 306 aaKnown RBP eCLIP43.09■■■■■ 4.49
PKN1-207ENST00000586557 SHROOM4Q9ULL8 1493 aa42.69■■■■■ 4.42
PKN1-207ENST00000586557 DNAJC5BQ9UF47 199 aa41.97■■■■■ 4.31
PKN1-207ENST00000586557 EIF4G1Q04637 1599 aaKnown RBP41.95■■■■■ 4.31
PKN1-207ENST00000586557 CC2D2AQ9P2K1 1620 aa41.68■■■■■ 4.26
PKN1-207ENST00000586557 CECR2Q9BXF3 1484 aa41.65■■■■■ 4.26
PKN1-207ENST00000586557 BAZ1AQ9NRL2 1556 aaPredicted RBP41.44■■■■■ 4.22
PKN1-207ENST00000586557 SMARCA4P51532 1647 aa41.44■■■■■ 4.22
PKN1-207ENST00000586557 MROH2BQ7Z745 1585 aa41.25■■■■■ 4.19
PKN1-207ENST00000586557 ATAD2BQ9ULI0 1458 aa41.14■■■■■ 4.18
PKN1-207ENST00000586557 SMARCA2P51531 1590 aa41.08■■■■■ 4.17
PKN1-207ENST00000586557 NCAPD3P42695 1498 aa41.05■■■■■ 4.16
PKN1-207ENST00000586557 PEG3Q9GZU2 1588 aa41.03■■■■■ 4.16
PKN1-207ENST00000586557 HMGXB3Q12766 1538 aa40.89■■■■■ 4.14
PKN1-207ENST00000586557 RSF1Q96T23 1441 aaPredicted RBP40.89■■■■■ 4.14
PKN1-207ENST00000586557 BAZ1BQ9UIG0 1483 aaKnown RBP40.81■■■■■ 4.12
PKN1-207ENST00000586557 WIZO95785 1651 aa40.8■■■■■ 4.12
PKN1-207ENST00000586557 TOP2AP11388 1531 aaKnown RBP40.41■■■■■ 4.06
PKN1-207ENST00000586557 SUPT5HO00267 1087 aaKnown RBP40.07■■■■■ 4.01
PKN1-207ENST00000586557 NESP48681 1621 aa39.97■■■■□ 3.99
PKN1-207ENST00000586557 CCDC88BA6NC98 1476 aa39.92■■■■□ 3.98
PKN1-207ENST00000586557 LAMC3Q9Y6N6 1575 aa39.91■■■■□ 3.98
PKN1-207ENST00000586557 CADPSQ9ULU8 1353 aa39.87■■■■□ 3.97
PKN1-207ENST00000586557 CFTRP13569 1480 aa39.71■■■■□ 3.95
PKN1-207ENST00000586557 ERCC6Q03468 1493 aa39.67■■■■□ 3.94
PKN1-207ENST00000586557 PDS5BQ9NTI5 1447 aa39.62■■■■□ 3.93
PKN1-207ENST00000586557 KIF21AQ7Z4S6 1674 aa39.48■■■■□ 3.91
PKN1-207ENST00000586557 FANCD2Q9BXW9 1451 aa39.42■■■■□ 3.9
PKN1-207ENST00000586557 PRDM2Q13029 1718 aa39.41■■■■□ 3.9
PKN1-207ENST00000586557 CEP164Q9UPV0 1460 aa39.34■■■■□ 3.89
PKN1-207ENST00000586557 THOC2Q8NI27 1593 aaKnown RBP39.3■■■■□ 3.88
PKN1-207ENST00000586557 MRC2Q9UBG0 1479 aa39.22■■■■□ 3.87
PKN1-207ENST00000586557 CUX2O14529 1486 aa39.13■■■■□ 3.85
PKN1-207ENST00000586557 WDR62O43379 1518 aa39.08■■■■□ 3.85
PKN1-207ENST00000586557 URB2Q14146 1524 aaKnown RBP39.02■■■■□ 3.84
PKN1-207ENST00000586557 TOPBP1Q92547 1522 aa38.84■■■■□ 3.81
PKN1-207ENST00000586557 ABCC8Q09428 1581 aa38.82■■■■□ 3.81
PKN1-207ENST00000586557 DNMBPQ6XZF7 1577 aa38.82■■■■□ 3.8
PKN1-207ENST00000586557 CUX1P39880 1505 aa38.68■■■■□ 3.78
PKN1-207ENST00000586557 WRNQ14191 1432 aaPredicted RBP eCLIP38.54■■■■□ 3.768e-8■■■■■ 37.6
PKN1-207ENST00000586557 POLA1P09884 1462 aaPredicted RBP38.53■■■■□ 3.76
PKN1-207ENST00000586557 IFT140Q96RY7 1462 aa38.5■■■■□ 3.75
PKN1-207ENST00000586557 FGD5Q6ZNL6 1462 aa38.48■■■■□ 3.75
PKN1-207ENST00000586557 SYNJ1O43426 1573 aa38.44■■■■□ 3.74
PKN1-207ENST00000586557 TOP2BQ02880 1626 aa38.41■■■■□ 3.74
PKN1-207ENST00000586557 BIVM-ERCC5R4GMW8 1640 aa38.41■■■■□ 3.74
PKN1-207ENST00000586557 TARBP1Q13395 1621 aaKnown RBP38.38■■■■□ 3.73
PKN1-207ENST00000586557 RAD54L2Q9Y4B4 1467 aa38.35■■■■□ 3.73
PKN1-207ENST00000586557 SOGA1O94964 1423 aa38.35■■■■□ 3.73
PKN1-207ENST00000586557 ZNF608Q9ULD9 1512 aaPredicted RBP38.31■■■■□ 3.72
PKN1-207ENST00000586557 EIF4G3O43432 1585 aaKnown RBP38.17■■■■□ 3.7
PKN1-207ENST00000586557 WDR97A6NE52 1622 aa38.15■■■■□ 3.7
PKN1-207ENST00000586557 ABCA10Q8WWZ4 1543 aa38.13■■■■□ 3.69
PKN1-207ENST00000586557 AQRO60306 1485 aaKnown RBP eCLIP38.12■■■■□ 3.696e-7■■■■■ 31
PKN1-207ENST00000586557 TDRD9Q8NDG6 1382 aaKnown RBP38.11■■■■□ 3.69
PKN1-207ENST00000586557 ABCA5Q8WWZ7 1642 aa37.95■■■■□ 3.67
PKN1-207ENST00000586557 GAPVD1Q14C86 1478 aa37.93■■■■□ 3.66
PKN1-207ENST00000586557 GRIN2BQ13224 1484 aa37.88■■■■□ 3.65
PKN1-207ENST00000586557 TRIM41Q8WV44 630 aa37.82■■■■□ 3.64
PKN1-207ENST00000586557 PBRM1Q86U86 1689 aa37.82■■■■□ 3.64
PKN1-207ENST00000586557 SNAPC4Q5SXM2 1469 aa37.8■■■■□ 3.64
PKN1-207ENST00000586557 MAGI1Q96QZ7 1491 aaPredicted RBP37.75■■■■□ 3.63
PKN1-207ENST00000586557 KIF27Q86VH2 1401 aa37.7■■■■□ 3.63
PKN1-207ENST00000586557 ERICH3Q5RHP9 1530 aa37.67■■■■□ 3.62
PKN1-207ENST00000586557 CHIC1Q5VXU3 224 aa37.6■■■■□ 3.61
PKN1-207ENST00000586557 CHD1O14646 1710 aa37.6■■■■□ 3.61
PKN1-207ENST00000586557 SYNJ2O15056 1496 aa37.59■■■■□ 3.61
PKN1-207ENST00000586557 ADAMTS12P58397 1594 aa37.58■■■■□ 3.61
PKN1-207ENST00000586557 FBLN2P98095 1184 aa37.56■■■■□ 3.6
PKN1-207ENST00000586557 OSCARQ8IYS5 282 aa37.54■■■■□ 3.6
PKN1-207ENST00000586557 CHMP7Q8WUX9 453 aaPredicted RBP37.52■■■■□ 3.6
PKN1-207ENST00000586557 DNAJC5Q9H3Z4 198 aa37.52■■■■□ 3.6
PKN1-207ENST00000586557 IGF1RP08069 1367 aa37.51■■■■□ 3.59
PKN1-207ENST00000586557 FHAD1B1AJZ9 1412 aa37.51■■■■□ 3.59
PKN1-207ENST00000586557 RUSC2Q8N2Y8 1516 aa37.47■■■■□ 3.59
PKN1-207ENST00000586557 GRIN2AQ12879 1464 aa37.39■■■■□ 3.58
PKN1-207ENST00000586557 CUL7Q14999 1698 aa37.38■■■■□ 3.57
PKN1-207ENST00000586557 CARMIL1Q5VZK9 1371 aa37.29■■■■□ 3.56
PKN1-207ENST00000586557 NUP160Q12769 1436 aa37.23■■■■□ 3.55
PKN1-207ENST00000586557 CLASP1Q7Z460 1538 aa37.23■■■■□ 3.55
PKN1-207ENST00000586557 EEA1Q15075 1411 aa37.2■■■■□ 3.55
PKN1-207ENST00000586557 CEP170Q5SW79 1584 aa37.2■■■■□ 3.55
PKN1-207ENST00000586557 RAPGEF2Q9Y4G8 1499 aa37.11■■■■□ 3.53
PKN1-207ENST00000586557 CSRNP3Q8WYN3 585 aa37.09■■■■□ 3.53
PKN1-207ENST00000586557 PRXQ9BXM0 1461 aa37.08■■■■□ 3.53
PKN1-207ENST00000586557 FAM9AQ8IZU1 332 aaPredicted RBP37.03■■■■□ 3.52
PKN1-207ENST00000586557 ARHGEF11O15085 1522 aa36.98■■■■□ 3.51
PKN1-207ENST00000586557 KIAA0586Q9BVV6 1533 aa36.94■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms